| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is fbpB1 [H]
Identifier: 212225112
GI number: 212225112
Start: 1838696
End: 1840315
Strand: Reverse
Name: fbpB1 [H]
Synonym: TON_1959
Alternate gene names: 212225112
Gene position: 1840315-1838696 (Counterclockwise)
Preceding gene: 212225114
Following gene: 212225111
Centisome position: 99.61
GC content: 53.77
Gene sequence:
>1620_bases ATGAGGCTTTCGAAGCTCGTACTGCTCGTTCCGCTGGCTTTCCTTGCGGCCTTCTTCTACATCCCCCTAATCAGCATAAT AAAGACGGGATTGTGGGATAATGGCCCGACGCTCAAGTACATAGCCGCGGTTCTCTCAAACAACTATCACCAGCGTGTGA TCCTTTTCACGATAGGCCAGGCAATAGCATCCACGTTCCTGACCTTAGCTTTGGGCCTTCCCGGAGCGTACATCTTTGCC AAGTACGATTTTCCCGGAAAAAGCCTGCTCAAAGCGGTCCTCACCGTCCCATTCGTCATGCCAAGCGTGATGGTAGCTTT GGGCTACATCCTGCTCTTCGGTAAGAGCGGCTTCATAACCCAGATTATCGGTCGCGATTTGGGGATAATATACTCCTGGA AGGCCATACTTCTCGCCCACGCCTTCTACAACTTCCCCATCGTCATCAGAATGGTTTCCTCCCTCTGGCAGCGTGTTAAT CCCCACTACGAGGAGATGGCGATGGCTTTGGGTGCCCGAGACTGGAGGCTCTTCTGGAAGGTGACGCTCCCCCTGATTTC CCCCGCGATTTTCGCCTCGGCGATGCTCACCTTCGTCTTCTGCTTCCTCAGCTTCTCCATTCCGCTCATCCTCGGCGGCT ACCAGTACGCGACCATAGAGGTGGACATCTTCACCTCGATAATGGTGCTCCTGGACTTCAAGACGGGTTCTGCTCTGGCG ATAATCCAGATAACGCTCAGCATGCTCTTCATGTACCTCTACCTGAGGAGTCTTGACGCCTACGCTAGGCGTGAGGAGCA GAGAGTTCTCCAGAGGCCAAAGCGCTTTACGCGGAAAGACGTTTTCAGTCTTAAGGGACTCCTCATAGGGGCCTACTCGT TAGCCGTTCTGCTCTTCATCATAGCCCCGCTTTTAGCAGTCCTCTATGATTCCCTGCACTTCAACGACCAGTGGAGCCTT GAGTGGTACAGGAGGATATTCTCGACCGAATACAATCCCATGTTCGGTGCCACAACGCTCGACGCGATAAGGAACTCCCT AACCTTTGGATTTGCGACGGTCTTCCTCTCAGTGATAATCGCCCTTCCAGTCGCCTACGCGCTTCACCGCTGGAACTTCA AAGGAAAGCGGCTCTTCGACGTCCTCGTTATGCTCCCGCTGGCGAGTTCTGCCATAACCCTCGGTTTGGGATACATCAGG ATCTTCCACGGCACGCCGCTCTACTACACCGCCTGGCTCATCATCGCTGCTCACACGATAATTGCCTATCCCTTCGTCCT GAGGGCAGTTTCGACTTCGCTGAAGAAGATAAGACCCAACCTATGGGAGGCAGCCCTGAGTCTCGGCGCGAAGGAATGGA AAGCCTTTCTCAGGGTTGAGCTACCGCTTGCTCTTGGCGGCGTTATAGTGGGCGCCATCTTCGCCTTCGCGATAAGCATA GCCGAGCTTGGAGCGACCTACATGCTGGCAAGGCCAGAATACACCACTATGACAGTTGCAATATACCGCTTCCTCGGGGC GAGACAGTTCGGTTCTGCTTCGGCCCTTTCAGTTCTCCTGATGGCGATTTCAACTGCGAGCTTCCTAATCATAGAGAGAA TAGGTGAGGAAGTATGGTGA
Upstream 100 bases:
>100_bases GCTCAGGGGCTTTCATGGTATCACCAGAGAGAGTTCGCACTGGGATTTAACAACTTTGTCCAAATCAAAACTTATAAGCC AACAAAACCGAGTTGTGAAC
Downstream 100 bases:
>100_bases GGGTTGAACTGAGAAACGTAGTTAGGGCATGGGAAGATTTCAGGCTGACTATCGAGTATCTGGAAGCCAGAGACGGCGAG TTTTTAACGCTCCTCGGTCC
Product: ABC-type iron(III) transport system, permease component
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MRLSKLVLLVPLAFLAAFFYIPLISIIKTGLWDNGPTLKYIAAVLSNNYHQRVILFTIGQAIASTFLTLALGLPGAYIFA KYDFPGKSLLKAVLTVPFVMPSVMVALGYILLFGKSGFITQIIGRDLGIIYSWKAILLAHAFYNFPIVIRMVSSLWQRVN PHYEEMAMALGARDWRLFWKVTLPLISPAIFASAMLTFVFCFLSFSIPLILGGYQYATIEVDIFTSIMVLLDFKTGSALA IIQITLSMLFMYLYLRSLDAYARREEQRVLQRPKRFTRKDVFSLKGLLIGAYSLAVLLFIIAPLLAVLYDSLHFNDQWSL EWYRRIFSTEYNPMFGATTLDAIRNSLTFGFATVFLSVIIALPVAYALHRWNFKGKRLFDVLVMLPLASSAITLGLGYIR IFHGTPLYYTAWLIIAAHTIIAYPFVLRAVSTSLKKIRPNLWEAALSLGAKEWKAFLRVELPLALGGVIVGAIFAFAISI AELGATYMLARPEYTTMTVAIYRFLGARQFGSASALSVLLMAISTASFLIIERIGEEVW
Sequences:
>Translated_539_residues MRLSKLVLLVPLAFLAAFFYIPLISIIKTGLWDNGPTLKYIAAVLSNNYHQRVILFTIGQAIASTFLTLALGLPGAYIFA KYDFPGKSLLKAVLTVPFVMPSVMVALGYILLFGKSGFITQIIGRDLGIIYSWKAILLAHAFYNFPIVIRMVSSLWQRVN PHYEEMAMALGARDWRLFWKVTLPLISPAIFASAMLTFVFCFLSFSIPLILGGYQYATIEVDIFTSIMVLLDFKTGSALA IIQITLSMLFMYLYLRSLDAYARREEQRVLQRPKRFTRKDVFSLKGLLIGAYSLAVLLFIIAPLLAVLYDSLHFNDQWSL EWYRRIFSTEYNPMFGATTLDAIRNSLTFGFATVFLSVIIALPVAYALHRWNFKGKRLFDVLVMLPLASSAITLGLGYIR IFHGTPLYYTAWLIIAAHTIIAYPFVLRAVSTSLKKIRPNLWEAALSLGAKEWKAFLRVELPLALGGVIVGAIFAFAISI AELGATYMLARPEYTTMTVAIYRFLGARQFGSASALSVLLMAISTASFLIIERIGEEVW >Mature_539_residues MRLSKLVLLVPLAFLAAFFYIPLISIIKTGLWDNGPTLKYIAAVLSNNYHQRVILFTIGQAIASTFLTLALGLPGAYIFA KYDFPGKSLLKAVLTVPFVMPSVMVALGYILLFGKSGFITQIIGRDLGIIYSWKAILLAHAFYNFPIVIRMVSSLWQRVN PHYEEMAMALGARDWRLFWKVTLPLISPAIFASAMLTFVFCFLSFSIPLILGGYQYATIEVDIFTSIMVLLDFKTGSALA IIQITLSMLFMYLYLRSLDAYARREEQRVLQRPKRFTRKDVFSLKGLLIGAYSLAVLLFIIAPLLAVLYDSLHFNDQWSL EWYRRIFSTEYNPMFGATTLDAIRNSLTFGFATVFLSVIIALPVAYALHRWNFKGKRLFDVLVMLPLASSAITLGLGYIR IFHGTPLYYTAWLIIAAHTIIAYPFVLRAVSTSLKKIRPNLWEAALSLGAKEWKAFLRVELPLALGGVIVGAIFAFAISI AELGATYMLARPEYTTMTVAIYRFLGARQFGSASALSVLLMAISTASFLIIERIGEEVW
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=192, Percent_Identity=32.8125, Blast_Score=104, Evalue=1e-23, Organism=Escherichia coli, GI1786254, Length=522, Percent_Identity=23.1800766283525, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI87082099, Length=278, Percent_Identity=25.5395683453237, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1787368, Length=219, Percent_Identity=23.7442922374429, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1786980, Length=213, Percent_Identity=30.0469483568075, Blast_Score=72, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 60478; Mature: 60478
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: PS00435 PEROXIDASE_1 ; PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSKLVLLVPLAFLAAFFYIPLISIIKTGLWDNGPTLKYIAAVLSNNYHQRVILFTIGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHH AIASTFLTLALGLPGAYIFAKYDFPGKSLLKAVLTVPFVMPSVMVALGYILLFGKSGFIT HHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QIIGRDLGIIYSWKAILLAHAFYNFPIVIRMVSSLWQRVNPHYEEMAMALGARDWRLFWK HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEE VTLPLISPAIFASAMLTFVFCFLSFSIPLILGGYQYATIEVDIFTSIMVLLDFKTGSALA EHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCCCHH IIQITLSMLFMYLYLRSLDAYARREEQRVLQRPKRFTRKDVFSLKGLLIGAYSLAVLLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAPLLAVLYDSLHFNDQWSLEWYRRIFSTEYNPMFGATTLDAIRNSLTFGFATVFLSVII HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALPVAYALHRWNFKGKRLFDVLVMLPLASSAITLGLGYIRIFHGTPLYYTAWLIIAAHTI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH IAYPFVLRAVSTSLKKIRPNLWEAALSLGAKEWKAFLRVELPLALGGVIVGAIFAFAISI HHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHH AELGATYMLARPEYTTMTVAIYRFLGARQFGSASALSVLLMAISTASFLIIERIGEEVW HHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRLSKLVLLVPLAFLAAFFYIPLISIIKTGLWDNGPTLKYIAAVLSNNYHQRVILFTIGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEHHHHH AIASTFLTLALGLPGAYIFAKYDFPGKSLLKAVLTVPFVMPSVMVALGYILLFGKSGFIT HHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH QIIGRDLGIIYSWKAILLAHAFYNFPIVIRMVSSLWQRVNPHYEEMAMALGARDWRLFWK HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEE VTLPLISPAIFASAMLTFVFCFLSFSIPLILGGYQYATIEVDIFTSIMVLLDFKTGSALA EHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCCCHH IIQITLSMLFMYLYLRSLDAYARREEQRVLQRPKRFTRKDVFSLKGLLIGAYSLAVLLFI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAPLLAVLYDSLHFNDQWSLEWYRRIFSTEYNPMFGATTLDAIRNSLTFGFATVFLSVII HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH ALPVAYALHRWNFKGKRLFDVLVMLPLASSAITLGLGYIRIFHGTPLYYTAWLIIAAHTI HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHH IAYPFVLRAVSTSLKKIRPNLWEAALSLGAKEWKAFLRVELPLALGGVIVGAIFAFAISI HHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHEECHHHHHHHHHHHHHHHHHHH AELGATYMLARPEYTTMTVAIYRFLGARQFGSASALSVLLMAISTASFLIIERIGEEVW HHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]