Click here to switch to the map view.

The map label for this gene is 212225105

Identifier: 212225105

GI number: 212225105

Start: 1831427

End: 1832233

Strand: Reverse

Name: 212225105

Synonym: TON_1952

Alternate gene names: NA

Gene position: 1832233-1831427 (Counterclockwise)

Preceding gene: 212225106

Following gene: 212225101

Centisome position: 99.17

GC content: 52.17

Gene sequence:

>807_bases
ATGAAAAAGCGCCTCCCAGCGAGCAGGGTCTACATCAAGGACATCATCGACGGCTACTACGTTAAGAGTGAAGGGGACTT
CGAGCCCAACTACCTTATAACGAAGGACGCGAGAAAGGTCTACCGCGTCAAGGTCGTCGCCACCGTCGTTCGCGAGCCGG
TTATAAGTGACGACGAGACCTATGGAAAGCTCCAGATCGACGACGGAACCGGAACCATATGGGTGCTCGGCTTTAGAGAC
GACACGAGGTTCATCAGGCTCGTCAAGAAGGGCGACCTCGTCCAGATAATTGGCAAGGTTGCCGAATGGCGCGATGACAA
GCAGATACTTGTCGAGGGTATCTCCAAAGTCAATCCCAACATGTGGATACTCCACCGCTTTGAGACGCTGAAGGAGAAGG
TCGAACACGCCAAGAAGGCTCAGATAGCATTCGAGATTTACGATAAGTACGGTATCACTGCGAAGGCCAAGGTTATAGCC
AAGAATAAGGGCGTTAGCGAGGACCTACTGCTGACAATTGACGAGCTCTACACGATAATGCTCGAGCACAGGAACCTCGA
GGAGGAGCTCTTCGAAGAGGAAGTTCCTGAAGTCGAGGAAAAGACTGAGGAGAACCCAGAGCTCGAAAAGGCTAAGAAGG
CCGTCCTTGATCTGTTGAAGGAGAAGCAAAAGGCACTGTCCCACAAGTTCATCATCAAGAAGCTCTCGAAGGAGTTCGAC
GAGGAGCTCATCGAGGAGGCCATAACACAGCTTCTGGCCGAAGGAGAAATCTACGAACCGGAGATAGGCTACTACGAGCC
GCTGTGA

Upstream 100 bases:

>100_bases
GCGAGGCAGATTTGGAAGCGCTGGAGGAGATTAGGGAGCTTGAGAGGAAGGTTCTCCCCAGGGTGGAGAGCGTCATCGAG
TTCTTTGGAGGTGAGGAGCT

Downstream 100 bases:

>100_bases
GCTCTTTCTCTTTTAATCCCCTCGAAAAATAGAAAAAGCAGAAGTCAATACTGCTCCCTCATCGTCCTTATGACAGGGTC
ATGAATGAGAGTCGAGGTTA

Product: replication factor A complex, RPA32 subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKKRLPASRVYIKDIIDGYYVKSEGDFEPNYLITKDARKVYRVKVVATVVREPVISDDETYGKLQIDDGTGTIWVLGFRD
DTRFIRLVKKGDLVQIIGKVAEWRDDKQILVEGISKVNPNMWILHRFETLKEKVEHAKKAQIAFEIYDKYGITAKAKVIA
KNKGVSEDLLLTIDELYTIMLEHRNLEEELFEEEVPEVEEKTEENPELEKAKKAVLDLLKEKQKALSHKFIIKKLSKEFD
EELIEEAITQLLAEGEIYEPEIGYYEPL

Sequences:

>Translated_268_residues
MKKRLPASRVYIKDIIDGYYVKSEGDFEPNYLITKDARKVYRVKVVATVVREPVISDDETYGKLQIDDGTGTIWVLGFRD
DTRFIRLVKKGDLVQIIGKVAEWRDDKQILVEGISKVNPNMWILHRFETLKEKVEHAKKAQIAFEIYDKYGITAKAKVIA
KNKGVSEDLLLTIDELYTIMLEHRNLEEELFEEEVPEVEEKTEENPELEKAKKAVLDLLKEKQKALSHKFIIKKLSKEFD
EELIEEAITQLLAEGEIYEPEIGYYEPL
>Mature_268_residues
MKKRLPASRVYIKDIIDGYYVKSEGDFEPNYLITKDARKVYRVKVVATVVREPVISDDETYGKLQIDDGTGTIWVLGFRD
DTRFIRLVKKGDLVQIIGKVAEWRDDKQILVEGISKVNPNMWILHRFETLKEKVEHAKKAQIAFEIYDKYGITAKAKVIA
KNKGVSEDLLLTIDELYTIMLEHRNLEEELFEEEVPEVEEKTEENPELEKAKKAVLDLLKEKQKALSHKFIIKKLSKEFD
EELIEEAITQLLAEGEIYEPEIGYYEPL

Specific function: Unknown

COG id: COG3390

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31165; Mature: 31165

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRLPASRVYIKDIIDGYYVKSEGDFEPNYLITKDARKVYRVKVVATVVREPVISDDET
CCCCCCHHHHHHHHHHCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
YGKLQIDDGTGTIWVLGFRDDTRFIRLVKKGDLVQIIGKVAEWRDDKQILVEGISKVNPN
CCEEEEECCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC
MWILHRFETLKEKVEHAKKAQIAFEIYDKYGITAKAKVIAKNKGVSEDLLLTIDELYTIM
EEEEHHHHHHHHHHHHHHHHHHHHEEHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LEHRNLEEELFEEEVPEVEEKTEENPELEKAKKAVLDLLKEKQKALSHKFIIKKLSKEFD
HHHCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELIEEAITQLLAEGEIYEPEIGYYEPL
HHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKRLPASRVYIKDIIDGYYVKSEGDFEPNYLITKDARKVYRVKVVATVVREPVISDDET
CCCCCCHHHHHHHHHHCCEEECCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCC
YGKLQIDDGTGTIWVLGFRDDTRFIRLVKKGDLVQIIGKVAEWRDDKQILVEGISKVNPN
CCEEEEECCCCEEEEEEECCCHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCC
MWILHRFETLKEKVEHAKKAQIAFEIYDKYGITAKAKVIAKNKGVSEDLLLTIDELYTIM
EEEEHHHHHHHHHHHHHHHHHHHHEEHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHH
LEHRNLEEELFEEEVPEVEEKTEENPELEKAKKAVLDLLKEKQKALSHKFIIKKLSKEFD
HHHCCHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EELIEEAITQLLAEGEIYEPEIGYYEPL
HHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA