| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225082
Identifier: 212225082
GI number: 212225082
Start: 1813448
End: 1814224
Strand: Reverse
Name: 212225082
Synonym: TON_1930
Alternate gene names: NA
Gene position: 1814224-1813448 (Counterclockwise)
Preceding gene: 212225083
Following gene: 212225081
Centisome position: 98.19
GC content: 50.71
Gene sequence:
>777_bases ATGGAGTGGGTAGAACTATACATCGTTATGACGCTCTTCGTTGCTGGTCTCTTGACCCTCGCCTTCAGAAACAAAAGGCA GTACTTCATAGGCTTCAGGATAGGCTACACCTATCAGTCAGACGATGCCTGGAGGAAGGCAAACACCTTCGCTGGAATAT TCACGATAGCACTCTCGCTCTTCCTCCTCGTCCTGGCCATCGCGGGCGTTTCCCTCAACGTATTCGTCCTTGTCATGATA GCCGGCATCCTCCTGCTCCTTTTTCTTGGCACTTTAATTGCAAAGAAAGCCTACGAGATTGAGGATCTCTCTAATAATGC CCCGGAAAGACCAACTGAGCCCATAAATGTCAACGTCAGACCCTACATAATCGTTCAGCTCTCAGCAGTGGTTTTCTATC TCGTACTAACGATTCTCCTCTGGGACAAGTTGCCGGAAAAGGTAGCCATCCACTTCAACGCGAGCGGAGAACCGGACAAC TTCGCATCTAAAGACGTGGGAGCAATTATCCTCCCCCTGATTGCCCAAGTCCTCCCAATCACGATGACCCTTCTCCTCAG GGAGCCGGGTTTTGCACCACAGCTTAAGTTCAGCGAGAAAGGCTGGATGGTCTTTGCAGAGCTGATGACACTCGTTGGAG CGGGAATCGCGGCGATAGCCTCAATGGCACTCCTCTACAATGCAGGCCTAATTCCAAGTAACTGGATAACCTACGGTGCC TTCGTATTCCTCACTGTGACCTTCGTCGGAATATCTAGGACACTATCGGCGAGGTGA
Upstream 100 bases:
>100_bases AGTATTACAGACTTACGGATCTTGGAAGGGAAGTTCTAACCGAGCTGAGGGGTGAAATAAAGGAGATACGTGCAATTCTT GAGCGTGTGGAGGGATTTGA
Downstream 100 bases:
>100_bases TATGATGGAGCCCTATCTGCTCCTTAGGATCCTCTATGCCCTTTTCATGGGAGCATTTCTGATAGCTATGGGAATGCTGA CTTTCACGGCCAGAGACGAG
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MEWVELYIVMTLFVAGLLTLAFRNKRQYFIGFRIGYTYQSDDAWRKANTFAGIFTIALSLFLLVLAIAGVSLNVFVLVMI AGILLLLFLGTLIAKKAYEIEDLSNNAPERPTEPINVNVRPYIIVQLSAVVFYLVLTILLWDKLPEKVAIHFNASGEPDN FASKDVGAIILPLIAQVLPITMTLLLREPGFAPQLKFSEKGWMVFAELMTLVGAGIAAIASMALLYNAGLIPSNWITYGA FVFLTVTFVGISRTLSAR
Sequences:
>Translated_258_residues MEWVELYIVMTLFVAGLLTLAFRNKRQYFIGFRIGYTYQSDDAWRKANTFAGIFTIALSLFLLVLAIAGVSLNVFVLVMI AGILLLLFLGTLIAKKAYEIEDLSNNAPERPTEPINVNVRPYIIVQLSAVVFYLVLTILLWDKLPEKVAIHFNASGEPDN FASKDVGAIILPLIAQVLPITMTLLLREPGFAPQLKFSEKGWMVFAELMTLVGAGIAAIASMALLYNAGLIPSNWITYGA FVFLTVTFVGISRTLSAR >Mature_258_residues MEWVELYIVMTLFVAGLLTLAFRNKRQYFIGFRIGYTYQSDDAWRKANTFAGIFTIALSLFLLVLAIAGVSLNVFVLVMI AGILLLLFLGTLIAKKAYEIEDLSNNAPERPTEPINVNVRPYIIVQLSAVVFYLVLTILLWDKLPEKVAIHFNASGEPDN FASKDVGAIILPLIAQVLPITMTLLLREPGFAPQLKFSEKGWMVFAELMTLVGAGIAAIASMALLYNAGLIPSNWITYGA FVFLTVTFVGISRTLSAR
Specific function: Unknown
COG id: COG5658
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28531; Mature: 28531
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWVELYIVMTLFVAGLLTLAFRNKRQYFIGFRIGYTYQSDDAWRKANTFAGIFTIALSL CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH FLLVLAIAGVSLNVFVLVMIAGILLLLFLGTLIAKKAYEIEDLSNNAPERPTEPINVNVR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC PYIIVQLSAVVFYLVLTILLWDKLPEKVAIHFNASGEPDNFASKDVGAIILPLIAQVLPI CEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH TMTLLLREPGFAPQLKFSEKGWMVFAELMTLVGAGIAAIASMALLYNAGLIPSNWITYGA HHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHH FVFLTVTFVGISRTLSAR HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEWVELYIVMTLFVAGLLTLAFRNKRQYFIGFRIGYTYQSDDAWRKANTFAGIFTIALSL CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHH FLLVLAIAGVSLNVFVLVMIAGILLLLFLGTLIAKKAYEIEDLSNNAPERPTEPINVNVR HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCC PYIIVQLSAVVFYLVLTILLWDKLPEKVAIHFNASGEPDNFASKDVGAIILPLIAQVLPI CEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH TMTLLLREPGFAPQLKFSEKGWMVFAELMTLVGAGIAAIASMALLYNAGLIPSNWITYGA HHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCHHHHHHH FVFLTVTFVGISRTLSAR HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA