Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

Click here to switch to the map view.

The map label for this gene is 212225063

Identifier: 212225063

GI number: 212225063

Start: 1800613

End: 1801146

Strand: Reverse

Name: 212225063

Synonym: TON_1911

Alternate gene names: NA

Gene position: 1801146-1800613 (Counterclockwise)

Preceding gene: 212225064

Following gene: 212225062

Centisome position: 97.49

GC content: 53.37

Gene sequence:

>534_bases
ATGTTCCACTTCAAGCTAACCCCCGAGCTCAGGAAGGAGTTAAAGGATCCCCTCGGAAAGCTCATCCGGGGGGAGATACC
CAAGCCATACCTCATGATTAGGGAAGAGCTTGAAAGGGCCAGGCACGTTGTCACCGTCGGCGACGTTGTTACAGAAAACG
TCCTCAGGCTCGGGATAAAGCCGAGCCTGGCCATCTACGATCATAAAACTAAAAGACAGGAATACAGTCCGGACATTGAG
AGCGATGCGGTCATAATGACCGTGCAGAATCCGCCCGGAACAATAACGAAAGCTTTATTAAACGCAATCAAAAAGGGATT
TGGACTAGCCGAGAGGGGCAGAAAGGTTTACATAAAGGTGTGCGGAGAGGAAGACCTCGCGGCGATTCCGGCCGTGCTCT
ACGCCCCCGAGGGCTCGGTGGTGCTCTACGGCCAGCCCGACGAGGGGGTAGTGCTTATAAAGGTAACACCCGAATGCAAG
CTCAAGTGCGGGAGGCTCATGTCTAAGATGGAGGTGGTTCGCGATGGAGATTAA

Upstream 100 bases:

>100_bases
AGTGGTTCGACCTCGTCATAATCACTGAACCCGAGAAGTCGAAAATAGCCCAGAAGCTGGGCGTCAAAGTCCCAGGAAAG
TACGCCATAAGGGTTAGATG

Downstream 100 bases:

>100_bases
GGTTACCGAGATTAAGGAGAACAAGCTCCTCGGAAGAAAGGAGATATACTTCGACGTCATTCACGAGGGTGAGCCAACCC
CGAGCAGGAAGGACGTCAAG

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIKPSLAIYDHKTKRQEYSPDIE
SDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKVCGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECK
LKCGRLMSKMEVVRDGD

Sequences:

>Translated_177_residues
MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIKPSLAIYDHKTKRQEYSPDIE
SDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKVCGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECK
LKCGRLMSKMEVVRDGD
>Mature_177_residues
MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIKPSLAIYDHKTKRQEYSPDIE
SDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKVCGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECK
LKCGRLMSKMEVVRDGD

Specific function: Unknown

COG id: COG1909

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0218 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1911_THEON (B6YW36)

Other databases:

- EMBL:   CP000855
- RefSeq:   YP_002308299.1
- GeneID:   7017583
- GenomeReviews:   CP000855_GR
- KEGG:   ton:TON_1911
- HOGENOM:   HBG724144
- OMA:   KPFGKVY
- ProtClustDB:   PRK01160
- HAMAP:   MF_00590
- InterPro:   IPR007164
- PIRSF:   PIRSF006533

Pfam domain/function: PF04019 DUF359

EC number: NA

Molecular weight: Translated: 19753; Mature: 19753

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIK
CCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCC
PSLAIYDHKTKRQEYSPDIESDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKV
CCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHCCCEEEEEE
CGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECKLKCGRLMSKMEVVRDGD
ECCCCHHHCCEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFHFKLTPELRKELKDPLGKLIRGEIPKPYLMIREELERARHVVTVGDVVTENVLRLGIK
CCEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCC
PSLAIYDHKTKRQEYSPDIESDAVIMTVQNPPGTITKALLNAIKKGFGLAERGRKVYIKV
CCEEEECCCHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHCCCEEEEEE
CGEEDLAAIPAVLYAPEGSVVLYGQPDEGVVLIKVTPECKLKCGRLMSKMEVVRDGD
ECCCCHHHCCEEEECCCCCEEEEECCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA