Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212225053

Identifier: 212225053

GI number: 212225053

Start: 1790415

End: 1791050

Strand: Reverse

Name: 212225053

Synonym: TON_1901

Alternate gene names: NA

Gene position: 1791050-1790415 (Counterclockwise)

Preceding gene: 212225054

Following gene: 212225052

Centisome position: 96.94

GC content: 48.27

Gene sequence:

>636_bases
ATGATGAAAAAAGCGAAGCGTGGCCAGGTTTCACTGGAGTTTATGCTCATATTCGGTATAATGCTTATACTGTTACTTTA
CTCTGTGAACAACGTTACTTTCCGGGAAGGCTCAACTTCAACTGAAACTCTCCGTATTCAGGTAAGTCTCGAGGAGAAGA
ACCTCGCCAACGCCATATCCAACACCATAAGCCAAGTTTATGCCCAGGGACCCGGTGCCAAATCCACCACCTACGTCAGG
CTGACATACTTAAGGGATGCAGGCCTGCTCGAAAAGGCCCTGAACCTGGAGAGTCCGAGAATATTCATAACCTACGGCAA
CTACAGCAATGATGGCAACGGTACTTACGTCACAGTCACTGGCACGGGCTTTAACATCGTTCTTAGTGGCGGAGATAAGA
ACATATTCTGGAGCAGGGCAATGTATCAAGCTGTGCTGTACGATAACTCGTCCATATGGTCTCCCATAGGAGACATCACT
ATTGGCGCGGATACCATTTACGGCCTGGAGATAGACCCCAATGACCTCCCTGTGACCCTGAAAATAGTCGTCGAGTGGAA
CCCTGACAATCCCAACAGCTGGACGTTTGATTCCACAAAGGGCGAGCTGAGAATAAACATTAATCCTGGTGGCTGA

Upstream 100 bases:

>100_bases
AAAAGCCGGAACGGGCCTTTTTGCAGTAATAAAAGCTGAAAAATCCGAGAGTAACCATTAAATAGATGTTCACACCATAT
CAATACTGAGGGGAGAATGT

Downstream 100 bases:

>100_bases
ACATGAAGATGGGACAGATAAGCATTGACCTCCTCTTTGCGGTTACTCTGATAACCTTAACAATGGTTAACCTAGTTTAT
ATTGCCAGTAGCGAGACAAC

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAISNTISQVYAQGPGAKSTTYVR
LTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVTGTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDIT
IGADTIYGLEIDPNDLPVTLKIVVEWNPDNPNSWTFDSTKGELRININPGG

Sequences:

>Translated_211_residues
MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAISNTISQVYAQGPGAKSTTYVR
LTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVTGTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDIT
IGADTIYGLEIDPNDLPVTLKIVVEWNPDNPNSWTFDSTKGELRININPGG
>Mature_211_residues
MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAISNTISQVYAQGPGAKSTTYVR
LTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVTGTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDIT
IGADTIYGLEIDPNDLPVTLKIVVEWNPDNPNSWTFDSTKGELRININPGG

Specific function: Unknown

COG id: COG1991

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23308; Mature: 23308

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAIS
CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCHHHHHHHH
NTISQVYAQGPGAKSTTYVRLTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVT
HHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEE
GTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDITIGADTIYGLEIDPNDLPVTL
ECCEEEEEECCCCCEEEHHHEEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCCCEEE
KIVVEWNPDNPNSWTFDSTKGELRININPGG
EEEEEECCCCCCCEEECCCCCEEEEEECCCC
>Mature Secondary Structure
MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAIS
CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCHHHHHHHH
NTISQVYAQGPGAKSTTYVRLTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVT
HHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEE
GTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDITIGADTIYGLEIDPNDLPVTL
ECCEEEEEECCCCCEEEHHHEEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCCCEEE
KIVVEWNPDNPNSWTFDSTKGELRININPGG
EEEEEECCCCCCCEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA