| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212225053
Identifier: 212225053
GI number: 212225053
Start: 1790415
End: 1791050
Strand: Reverse
Name: 212225053
Synonym: TON_1901
Alternate gene names: NA
Gene position: 1791050-1790415 (Counterclockwise)
Preceding gene: 212225054
Following gene: 212225052
Centisome position: 96.94
GC content: 48.27
Gene sequence:
>636_bases ATGATGAAAAAAGCGAAGCGTGGCCAGGTTTCACTGGAGTTTATGCTCATATTCGGTATAATGCTTATACTGTTACTTTA CTCTGTGAACAACGTTACTTTCCGGGAAGGCTCAACTTCAACTGAAACTCTCCGTATTCAGGTAAGTCTCGAGGAGAAGA ACCTCGCCAACGCCATATCCAACACCATAAGCCAAGTTTATGCCCAGGGACCCGGTGCCAAATCCACCACCTACGTCAGG CTGACATACTTAAGGGATGCAGGCCTGCTCGAAAAGGCCCTGAACCTGGAGAGTCCGAGAATATTCATAACCTACGGCAA CTACAGCAATGATGGCAACGGTACTTACGTCACAGTCACTGGCACGGGCTTTAACATCGTTCTTAGTGGCGGAGATAAGA ACATATTCTGGAGCAGGGCAATGTATCAAGCTGTGCTGTACGATAACTCGTCCATATGGTCTCCCATAGGAGACATCACT ATTGGCGCGGATACCATTTACGGCCTGGAGATAGACCCCAATGACCTCCCTGTGACCCTGAAAATAGTCGTCGAGTGGAA CCCTGACAATCCCAACAGCTGGACGTTTGATTCCACAAAGGGCGAGCTGAGAATAAACATTAATCCTGGTGGCTGA
Upstream 100 bases:
>100_bases AAAAGCCGGAACGGGCCTTTTTGCAGTAATAAAAGCTGAAAAATCCGAGAGTAACCATTAAATAGATGTTCACACCATAT CAATACTGAGGGGAGAATGT
Downstream 100 bases:
>100_bases ACATGAAGATGGGACAGATAAGCATTGACCTCCTCTTTGCGGTTACTCTGATAACCTTAACAATGGTTAACCTAGTTTAT ATTGCCAGTAGCGAGACAAC
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAISNTISQVYAQGPGAKSTTYVR LTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVTGTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDIT IGADTIYGLEIDPNDLPVTLKIVVEWNPDNPNSWTFDSTKGELRININPGG
Sequences:
>Translated_211_residues MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAISNTISQVYAQGPGAKSTTYVR LTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVTGTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDIT IGADTIYGLEIDPNDLPVTLKIVVEWNPDNPNSWTFDSTKGELRININPGG >Mature_211_residues MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAISNTISQVYAQGPGAKSTTYVR LTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVTGTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDIT IGADTIYGLEIDPNDLPVTLKIVVEWNPDNPNSWTFDSTKGELRININPGG
Specific function: Unknown
COG id: COG1991
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23308; Mature: 23308
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAIS CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCHHHHHHHH NTISQVYAQGPGAKSTTYVRLTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVT HHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEE GTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDITIGADTIYGLEIDPNDLPVTL ECCEEEEEECCCCCEEEHHHEEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCCCEEE KIVVEWNPDNPNSWTFDSTKGELRININPGG EEEEEECCCCCCCEEECCCCCEEEEEECCCC >Mature Secondary Structure MMKKAKRGQVSLEFMLIFGIMLILLLYSVNNVTFREGSTSTETLRIQVSLEEKNLANAIS CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEEEECCHHHHHHHH NTISQVYAQGPGAKSTTYVRLTYLRDAGLLEKALNLESPRIFITYGNYSNDGNGTYVTVT HHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEE GTGFNIVLSGGDKNIFWSRAMYQAVLYDNSSIWSPIGDITIGADTIYGLEIDPNDLPVTL ECCEEEEEECCCCCEEEHHHEEEEEEECCCCCCCCCCCEEECCCEEEEEEECCCCCCEEE KIVVEWNPDNPNSWTFDSTKGELRININPGG EEEEEECCCCCCCEEECCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA