| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224984
Identifier: 212224984
GI number: 212224984
Start: 1717813
End: 1719555
Strand: Reverse
Name: 212224984
Synonym: TON_1833
Alternate gene names: NA
Gene position: 1719555-1717813 (Counterclockwise)
Preceding gene: 212224987
Following gene: 212224983
Centisome position: 93.07
GC content: 55.94
Gene sequence:
>1743_bases ATGAGGAGAGCGTTGCTTTTAATAATAACCCTAATTCTAATCGTCGGCTCCGTTCCACTCGCCTCCGGGAAGGCCGTTGA GGAGCCGACCCAGAGGGATGTTTTTCTCTATGAGTACTTCTCCAAGATTATCCTCCGCTTTGAGGACTCCCTGAAGTACG TCCTGGTTAACGAGAGCTACGGCCTAACTCTCGCCAACACCACCCTAAACGAGCTGGAGCTCATCCACCTGGAGGCGCTG TACTACCAGGAGAAAGGAGTTAACCCCACGGTGATGAAAGTTATCCAGCCGTTCTACGAATTCTCCAGAGAGCTGATGAT TCTGAACGAGCTCATACTTGAGTTCCGCAAAAATCCAACACCCGCGGTTACAGCCGGAATCCGGGGCACAGTCCTCAACA TGGAGTCCCTCCTGGATGAGATAGACTCTCTGGAACTGATGAACGGGACCGAAATCCTGAAGTTCAATACGGAGAAGGTC AGAAAGTACCTCGGCGAGATAGATAAACTCGTCTCCAGGACTCCCCCCAGCGGGAAGTTCGAGATAGGGATCTCGGATTC AGAGCCGATGCTCTACCAGTCAGTCACAATCTTCGGCTCCTGTCCGGGCAACGAGACTGTCACAGTGGTCATCACAAAAG GGAACTTCACGTCCTTCCTCATAGTCACCCCCCAGAACGGGCTCTTTGCCACCATGTACCGGTTCAGGGAGCTCGGGACT TACACGGTGTACGCCACCCAGGGAGGGCTCAGGTCGAACACCATCAACGTGACGGTGAGGAAGATACCCTCCGTCTTTCT GGTCGAAAACGTCTACAGCGCCTTTCTGAACCAGAGCCTCACCGTCTCCGGAAAGCTCATTGACTACTACGGCAACCCCC TGGGGGAGAGGGAGATAACGGTTGGAGACGAAACGCTCGTCACCGGGCCCGATGGAGGCTTCGCAAAGAGCTACCACTCC TCCGAGGCCGTAACGTTCCAGGTGCCGCTGGAATTCGCCGGCGACGGAACCCACACCGGAACCTCAGAGATAGTCACGGT TGAGTTCAGGCGCTTCCCGGTTGCGATAACCCTCAACGGGCCAGAGAGAATAACCCTCGGGGAAAAAGCCGCGTTCACAG GAAGGGTGAAGCCGAACATGACCTTCCCCCTCATCGTTTATGTCAACGACACCCCTCAGTTCAACATCACGGCCGAGAAC GGAACCTTCTCCTTCGCCCTGGAGCCGCAGAGTCCCGGTCGGCTGAAGGTCTACGTGGCCTTCGCCGGCAGCGAGGTGTA CGAGGGAGCCACCTCCAATGTGGTCCTCCTCACCGTCGTCCCGCCGGAGAACATGCTGCCGAGGTACATCGCAATCGTTG TCCTGGCGATGCTCCTCGCGGCTGGCATCCTAACTAGGAGAAAGAAAGACCAAACAACGCCTCAAGCATCCCAGAAGACG GTCTTCAAGTACGCGGCAGGGGGGAATGAAACGTCCGGAGAGTTCCTTGAAATCCCCGAAGACATCGGTGAGGCTTATAA GCTCCTCAGAGAAAGGCTGAGGGAGATGTTCGGAATAAGCGAGAGCCTGACTCCGAGGGAAGTCCTGAGGATTCTCCGCG ACTGGGAGCTGTATCCAGACCTTGAGGCCGTAACAAAGCTCCACGAGAAAGCCGTTTACGGGGAAATCCCCCTGAGTGGG GAGGAGCTAACCGAGTTCAGGGCGAGCATCGAGAGGCTGCTTCGGGGTGAGAGAGGTGAATAA
Upstream 100 bases:
>100_bases GATTCCAGCCGCTAAAAGGATACTTCCCAAAATCCTCCCCATTCTAACACCGGAACGAATAAACTTAATAAGGTTTTTAT GCCTTATGGATGCGATGGCG
Downstream 100 bases:
>100_bases AACCATAAAGTACCTCGTTCTTATCCTACTCATCTTCACCCTCATCACCATGCCGCTGACGGTACCCCTGTTCAAGAGCT CCACCCAGTACAGTATGTTC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MRRALLLIITLILIVGSVPLASGKAVEEPTQRDVFLYEYFSKIILRFEDSLKYVLVNESYGLTLANTTLNELELIHLEAL YYQEKGVNPTVMKVIQPFYEFSRELMILNELILEFRKNPTPAVTAGIRGTVLNMESLLDEIDSLELMNGTEILKFNTEKV RKYLGEIDKLVSRTPPSGKFEIGISDSEPMLYQSVTIFGSCPGNETVTVVITKGNFTSFLIVTPQNGLFATMYRFRELGT YTVYATQGGLRSNTINVTVRKIPSVFLVENVYSAFLNQSLTVSGKLIDYYGNPLGEREITVGDETLVTGPDGGFAKSYHS SEAVTFQVPLEFAGDGTHTGTSEIVTVEFRRFPVAITLNGPERITLGEKAAFTGRVKPNMTFPLIVYVNDTPQFNITAEN GTFSFALEPQSPGRLKVYVAFAGSEVYEGATSNVVLLTVVPPENMLPRYIAIVVLAMLLAAGILTRRKKDQTTPQASQKT VFKYAAGGNETSGEFLEIPEDIGEAYKLLRERLREMFGISESLTPREVLRILRDWELYPDLEAVTKLHEKAVYGEIPLSG EELTEFRASIERLLRGERGE
Sequences:
>Translated_580_residues MRRALLLIITLILIVGSVPLASGKAVEEPTQRDVFLYEYFSKIILRFEDSLKYVLVNESYGLTLANTTLNELELIHLEAL YYQEKGVNPTVMKVIQPFYEFSRELMILNELILEFRKNPTPAVTAGIRGTVLNMESLLDEIDSLELMNGTEILKFNTEKV RKYLGEIDKLVSRTPPSGKFEIGISDSEPMLYQSVTIFGSCPGNETVTVVITKGNFTSFLIVTPQNGLFATMYRFRELGT YTVYATQGGLRSNTINVTVRKIPSVFLVENVYSAFLNQSLTVSGKLIDYYGNPLGEREITVGDETLVTGPDGGFAKSYHS SEAVTFQVPLEFAGDGTHTGTSEIVTVEFRRFPVAITLNGPERITLGEKAAFTGRVKPNMTFPLIVYVNDTPQFNITAEN GTFSFALEPQSPGRLKVYVAFAGSEVYEGATSNVVLLTVVPPENMLPRYIAIVVLAMLLAAGILTRRKKDQTTPQASQKT VFKYAAGGNETSGEFLEIPEDIGEAYKLLRERLREMFGISESLTPREVLRILRDWELYPDLEAVTKLHEKAVYGEIPLSG EELTEFRASIERLLRGERGE >Mature_580_residues MRRALLLIITLILIVGSVPLASGKAVEEPTQRDVFLYEYFSKIILRFEDSLKYVLVNESYGLTLANTTLNELELIHLEAL YYQEKGVNPTVMKVIQPFYEFSRELMILNELILEFRKNPTPAVTAGIRGTVLNMESLLDEIDSLELMNGTEILKFNTEKV RKYLGEIDKLVSRTPPSGKFEIGISDSEPMLYQSVTIFGSCPGNETVTVVITKGNFTSFLIVTPQNGLFATMYRFRELGT YTVYATQGGLRSNTINVTVRKIPSVFLVENVYSAFLNQSLTVSGKLIDYYGNPLGEREITVGDETLVTGPDGGFAKSYHS SEAVTFQVPLEFAGDGTHTGTSEIVTVEFRRFPVAITLNGPERITLGEKAAFTGRVKPNMTFPLIVYVNDTPQFNITAEN GTFSFALEPQSPGRLKVYVAFAGSEVYEGATSNVVLLTVVPPENMLPRYIAIVVLAMLLAAGILTRRKKDQTTPQASQKT VFKYAAGGNETSGEFLEIPEDIGEAYKLLRERLREMFGISESLTPREVLRILRDWELYPDLEAVTKLHEKAVYGEIPLSG EELTEFRASIERLLRGERGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64679; Mature: 64679
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRALLLIITLILIVGSVPLASGKAVEEPTQRDVFLYEYFSKIILRFEDSLKYVLVNESY CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC GLTLANTTLNELELIHLEALYYQEKGVNPTVMKVIQPFYEFSRELMILNELILEFRKNPT CEEEECCCCCCEEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAVTAGIRGTVLNMESLLDEIDSLELMNGTEILKFNTEKVRKYLGEIDKLVSRTPPSGKF CEEECCCCEEEECHHHHHHHHHCEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEE EIGISDSEPMLYQSVTIFGSCPGNETVTVVITKGNFTSFLIVTPQNGLFATMYRFRELGT EEECCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCC YTVYATQGGLRSNTINVTVRKIPSVFLVENVYSAFLNQSLTVSGKLIDYYGNPLGEREIT EEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEECEEEEECCCCCCCCEEE VGDETLVTGPDGGFAKSYHSSEAVTFQVPLEFAGDGTHTGTSEIVTVEFRRFPVAITLNG ECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEEECC PERITLGEKAAFTGRVKPNMTFPLIVYVNDTPQFNITAENGTFSFALEPQSPGRLKVYVA CCEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCEEEEEEE FAGSEVYEGATSNVVLLTVVPPENMLPRYIAIVVLAMLLAAGILTRRKKDQTTPQASQKT EECCHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VFKYAAGGNETSGEFLEIPEDIGEAYKLLRERLREMFGISESLTPREVLRILRDWELYPD EEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC LEAVTKLHEKAVYGEIPLSGEELTEFRASIERLLRGERGE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRRALLLIITLILIVGSVPLASGKAVEEPTQRDVFLYEYFSKIILRFEDSLKYVLVNESY CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCC GLTLANTTLNELELIHLEALYYQEKGVNPTVMKVIQPFYEFSRELMILNELILEFRKNPT CEEEECCCCCCEEEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PAVTAGIRGTVLNMESLLDEIDSLELMNGTEILKFNTEKVRKYLGEIDKLVSRTPPSGKF CEEECCCCEEEECHHHHHHHHHCEEECCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEE EIGISDSEPMLYQSVTIFGSCPGNETVTVVITKGNFTSFLIVTPQNGLFATMYRFRELGT EEECCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCC YTVYATQGGLRSNTINVTVRKIPSVFLVENVYSAFLNQSLTVSGKLIDYYGNPLGEREIT EEEEEECCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCEEEECEEEEECCCCCCCCEEE VGDETLVTGPDGGFAKSYHSSEAVTFQVPLEFAGDGTHTGTSEIVTVEFRRFPVAITLNG ECCCEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEEEEEEEECC PERITLGEKAAFTGRVKPNMTFPLIVYVNDTPQFNITAENGTFSFALEPQSPGRLKVYVA CCEEEECCCCEEECCCCCCCEEEEEEEECCCCCEEEEECCCEEEEEECCCCCCEEEEEEE FAGSEVYEGATSNVVLLTVVPPENMLPRYIAIVVLAMLLAAGILTRRKKDQTTPQASQKT EECCHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE VFKYAAGGNETSGEFLEIPEDIGEAYKLLRERLREMFGISESLTPREVLRILRDWELYPD EEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC LEAVTKLHEKAVYGEIPLSGEELTEFRASIERLLRGERGE HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA