Click here to switch to the map view.

The map label for this gene is yijE [C]

Identifier: 212224956

GI number: 212224956

Start: 1677265

End: 1678095

Strand: Reverse

Name: yijE [C]

Synonym: TON_1805

Alternate gene names: 212224956

Gene position: 1678095-1677265 (Counterclockwise)

Preceding gene: 212224961

Following gene: 212224955

Centisome position: 90.83

GC content: 52.59

Gene sequence:

>831_bases
ATGAACCGCTCCGAACTAATACTATTAGGCATCACGGCGATATGGGGCTTCACGTTTCCAGCTATGAAGGCGAGCCTAGA
TTACCTTCCCCCAATCCTGTTCCTCGCCTATCGCTTCGGAATCGCCTCGCTCCTCATGCTCATCATCTTCCGCTCTCGCG
TCCTCAAAAGGGAGACACTGAAGGAGGGGTTTGTCCTAGGCCTAACCCTCTTCTTCGGCCACGGCTTCCAGATAGTGGGG
CTGAAGTACACCACCGCCTCGAACTCGGCCTTCATCACGTCGCTCTACGTCGTCTTCACGCCGTTTATAGCCTACTTCAT
CCTCGGAGACAGGTTGGGAGGAAGGGACGTTCTTTCCCTGATCATGGCGCTGACCGGCCTTTACCTTATATCCGGGGCCA
GTCTAAACTTCAACTACGGCGATCTGCTAACCGTCCTCTGCGCGATAAGCTTCGCTTTCCAGATAGTCTTAGTTCAGCGC
TTTGAGAAGAAGGACTATCTCAGCTTGGCTTTCTGGCAGATACTCTGGAACTTCGTTTTCTCGTTAGCTTTTGCTCTGCT
CTTTGAGTCCTTAGTTGTTCCAAGAGACCCGATGCCTTGGATGGGCATTCTCTACACGGCAATATTCGCAACGGTTGTGG
CCTTCACGCTCCAAGTCAAGTACCAGAGGGACACAAAGGCCCACAGAGCAGCATTGATATATTCCGCTGAGCCTATATTC
GGCCACATAGCGGCTTTCCTGACGATAGGCGAGATACTGAGCCCCAAGGGCTACCTCGGTGCGGCGCTGATTATGGCAGG
CATATGGAATGAAGTTAGAAAAGAGGCCTGA

Upstream 100 bases:

>100_bases
TACCATAGTTGGAATTCAGACTATATAACCCTTATGAAAACGCACAGACGTGAGTCTATGCGGGGAAGTTCTTATAAATT
AAAGGGGACAACACACGGCG

Downstream 100 bases:

>100_bases
GAAGTATTTACCAACAAAAAGTTAATAAATTTCAAAGCTATTCTTTGTTGGAGGTGATGGAGATGATCCACGCATACATT
AAGGAAAAGGCCAGAGAGTT

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MNRSELILLGITAIWGFTFPAMKASLDYLPPILFLAYRFGIASLLMLIIFRSRVLKRETLKEGFVLGLTLFFGHGFQIVG
LKYTTASNSAFITSLYVVFTPFIAYFILGDRLGGRDVLSLIMALTGLYLISGASLNFNYGDLLTVLCAISFAFQIVLVQR
FEKKDYLSLAFWQILWNFVFSLAFALLFESLVVPRDPMPWMGILYTAIFATVVAFTLQVKYQRDTKAHRAALIYSAEPIF
GHIAAFLTIGEILSPKGYLGAALIMAGIWNEVRKEA

Sequences:

>Translated_276_residues
MNRSELILLGITAIWGFTFPAMKASLDYLPPILFLAYRFGIASLLMLIIFRSRVLKRETLKEGFVLGLTLFFGHGFQIVG
LKYTTASNSAFITSLYVVFTPFIAYFILGDRLGGRDVLSLIMALTGLYLISGASLNFNYGDLLTVLCAISFAFQIVLVQR
FEKKDYLSLAFWQILWNFVFSLAFALLFESLVVPRDPMPWMGILYTAIFATVVAFTLQVKYQRDTKAHRAALIYSAEPIF
GHIAAFLTIGEILSPKGYLGAALIMAGIWNEVRKEA
>Mature_276_residues
MNRSELILLGITAIWGFTFPAMKASLDYLPPILFLAYRFGIASLLMLIIFRSRVLKRETLKEGFVLGLTLFFGHGFQIVG
LKYTTASNSAFITSLYVVFTPFIAYFILGDRLGGRDVLSLIMALTGLYLISGASLNFNYGDLLTVLCAISFAFQIVLVQR
FEKKDYLSLAFWQILWNFVFSLAFALLFESLVVPRDPMPWMGILYTAIFATVVAFTLQVKYQRDTKAHRAALIYSAEPIF
GHIAAFLTIGEILSPKGYLGAALIMAGIWNEVRKEA

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 30940; Mature: 30940

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: PS00659 GLYCOSYL_HYDROL_F5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRSELILLGITAIWGFTFPAMKASLDYLPPILFLAYRFGIASLLMLIIFRSRVLKRETL
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEGFVLGLTLFFGHGFQIVGLKYTTASNSAFITSLYVVFTPFIAYFILGDRLGGRDVLSL
HHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IMALTGLYLISGASLNFNYGDLLTVLCAISFAFQIVLVQRFEKKDYLSLAFWQILWNFVF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SLAFALLFESLVVPRDPMPWMGILYTAIFATVVAFTLQVKYQRDTKAHRAALIYSAEPIF
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHH
GHIAAFLTIGEILSPKGYLGAALIMAGIWNEVRKEA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRSELILLGITAIWGFTFPAMKASLDYLPPILFLAYRFGIASLLMLIIFRSRVLKRETL
CCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEGFVLGLTLFFGHGFQIVGLKYTTASNSAFITSLYVVFTPFIAYFILGDRLGGRDVLSL
HHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
IMALTGLYLISGASLNFNYGDLLTVLCAISFAFQIVLVQRFEKKDYLSLAFWQILWNFVF
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
SLAFALLFESLVVPRDPMPWMGILYTAIFATVVAFTLQVKYQRDTKAHRAALIYSAEPIF
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCHHH
GHIAAFLTIGEILSPKGYLGAALIMAGIWNEVRKEA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]