| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224941
Identifier: 212224941
GI number: 212224941
Start: 1656820
End: 1657224
Strand: Reverse
Name: 212224941
Synonym: TON_1790
Alternate gene names: NA
Gene position: 1657224-1656820 (Counterclockwise)
Preceding gene: 212224942
Following gene: 212224940
Centisome position: 89.7
GC content: 48.4
Gene sequence:
>405_bases ATGCCAATTGAAGACTTCGCAGATTTCTTGGCGGGAAGGGTTCCGAGAGGGAAAATAGTCGAACTCGGTATAGGTTTCCA GTTCAAAGTGGCCTTAAAGCTGAAAGAGATGGGCTACGATGTTCTTGCAATTGACTGGAATCCAGCCTCCGTTGAAAAAG CAAGGGAGCTTGGGATAAACGCTATCAGGGATGACATCTTCAACCCAAGGCCGGAACTGTACAGGGATGCCAAAGCCTTG TACTCCGTAAGACCAACGCCCGAAATAGTCCAGCCGATTCTCGAGCTCGGGAAGAAGCTTGGACTCCCAGTTTACATCCT TCCCCTCAGTGGTGACACAATGCCCGGTAACCTGAAGCTTATCAACCACAAGGGATTGGCCATATACATGGCTAAAACTA TTTAA
Upstream 100 bases:
>100_bases TTGACGTTGTCTTTGACATGAGAAAGGCTCACGTCTTCGACAAAGGAAGCGGAAAAGCCGTCTTCTGAAGTTTTTTAAAT CCTTATTTCTATTTTCTCCC
Downstream 100 bases:
>100_bases AGTCGCTCCCAAGTAGTCATGGTGGTGTTATGAAGCTCTTCGGAACGGCTGGAATTAGAGGCACTTTATGGGAAAAGGTC ACACCAGACCTAGCGCTGAA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPIEDFADFLAGRVPRGKIVELGIGFQFKVALKLKEMGYDVLAIDWNPASVEKARELGINAIRDDIFNPRPELYRDAKAL YSVRPTPEIVQPILELGKKLGLPVYILPLSGDTMPGNLKLINHKGLAIYMAKTI
Sequences:
>Translated_134_residues MPIEDFADFLAGRVPRGKIVELGIGFQFKVALKLKEMGYDVLAIDWNPASVEKARELGINAIRDDIFNPRPELYRDAKAL YSVRPTPEIVQPILELGKKLGLPVYILPLSGDTMPGNLKLINHKGLAIYMAKTI >Mature_133_residues PIEDFADFLAGRVPRGKIVELGIGFQFKVALKLKEMGYDVLAIDWNPASVEKARELGINAIRDDIFNPRPELYRDAKALY SVRPTPEIVQPILELGKKLGLPVYILPLSGDTMPGNLKLINHKGLAIYMAKTI
Specific function: Unknown
COG id: COG1255
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0146 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR005353 - ProDom: PD021130 [H]
Pfam domain/function: PF03686 UPF0146 [H]
EC number: NA
Molecular weight: Translated: 14932; Mature: 14801
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEDFADFLAGRVPRGKIVELGIGFQFKVALKLKEMGYDVLAIDWNPASVEKARELGIN CCHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHCHH AIRDDIFNPRPELYRDAKALYSVRPTPEIVQPILELGKKLGLPVYILPLSGDTMPGNLKL HHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE INHKGLAIYMAKTI EECCCEEEEEEECC >Mature Secondary Structure PIEDFADFLAGRVPRGKIVELGIGFQFKVALKLKEMGYDVLAIDWNPASVEKARELGIN CHHHHHHHHHCCCCCCCEEEEECCEEEEEEEEEECCCCEEEEEECCCHHHHHHHHHCHH AIRDDIFNPRPELYRDAKALYSVRPTPEIVQPILELGKKLGLPVYILPLSGDTMPGNLKL HHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEE INHKGLAIYMAKTI EECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]