| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224823
Identifier: 212224823
GI number: 212224823
Start: 1536582
End: 1537655
Strand: Reverse
Name: 212224823
Synonym: TON_1672
Alternate gene names: NA
Gene position: 1537655-1536582 (Counterclockwise)
Preceding gene: 212224829
Following gene: 212224822
Centisome position: 83.22
GC content: 52.05
Gene sequence:
>1074_bases ATGAAGCAGAGAAAAGCTTGGCGGGTTGTGAGAGAGGTAATTGACGAGGCCGATATCATCGTCGAGGTAGTTGACGCGCG AGACCCTATAGGAACGAGGAACAGAAAACTGGAGAGGCTCGTTAAGGAGGAGGGAAAGCCGCTCCTTATAGTCATGAACA AGGCTGACCTCGTGCCCAAGGAGTGGGCCGAGGAGTATAAGAGAAAGAGCGAGATTCCGGTCGTTTTTATCTCCGCCCGC GAGAGGAAGGGAACTGGAATTTTAAGGAGGGAAATCAAAAAGCTCGCAAAGGGCCTGCTGGACTATCAGGATAAAGTTAA GGTGGCCCTCATAGGCTATCCCAACGTCGGCAAGAGCACGATAATCAACACGCTGAAGGGCAAGAAGGCCGTAGGAACAG CCCCTATTCCAGGCTACACAAAGGGGAAGCAGCTCATAAGGCTGAGCAAAAAGATATGGCTTCTCGACAGTCCTGGAGTT GTTCCCATAGATGACTTCGACGAGCTAGTCATCAAAGGAGGTTTTCCTGCAGACAAGATAGAGGAGCCAGTTAAGCCGGC ACTGAAGCTCATCGGCAGAATCCTGGAGACGAGAAAGGAGGCGCTAACGGAGAAGTTTGGCATTGAAGACTTTTCCAGCG AGGAAGATATCCTCAGGGAGATAGGAAAGCGAAAGGGCATAATCAGGAAGGGCGGTGAGGTTGACCTTGAGGAAACGGCT CGCTGGCTTCTCCGCGAGTGGCAGACCGGAAGGTTCACCCTCTTTGGAAAGGAGGAAGAGAAAGGCCAAGAGTTCGTCTG GGACTTCGAGGATGTTCTTGATGGCATCGAGAAGGATTTGCTCCTCGACCCAAGGAGGATACTCTGGAAATACGGCGAAG AGCTGAGGGAAAAGCTTGACAACACGAAGCGGGTTGGAATAAGGGAAATTGAGGGGTTCACCGTTGGCATCGCGACGGGC TTCAAGAAGTGCGACGGCGGAATAAAGCTCCTCGAAAAGCTCACCGGAAAGCACGCCCTTGCGAGTGAGTGCTTTGGGAA GAAGTGGAAGGGTGTCGTTGTGATAATGGAGTGA
Upstream 100 bases:
>100_bases GGGCTTGGTAGGGGAGAGAAAGCCTACGTGCAGTGCCTTGATCCTGGACCGCCCTACACAGACGGAGGGACGGTAATCTT TGAGATAACGGTGGTGCGAG
Downstream 100 bases:
>100_bases TGAAGGATGAGACTGCTACTCACGACTTCTCAGGGAATCGAAGATTTAGCAAAGGCCGAGGTAGAGAGCCTTCTCAGCCA GCTTGGAGTTTCGTTTCTGG
Product: GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MKQRKAWRVVREVIDEADIIVEVVDARDPIGTRNRKLERLVKEEGKPLLIVMNKADLVPKEWAEEYKRKSEIPVVFISAR ERKGTGILRREIKKLAKGLLDYQDKVKVALIGYPNVGKSTIINTLKGKKAVGTAPIPGYTKGKQLIRLSKKIWLLDSPGV VPIDDFDELVIKGGFPADKIEEPVKPALKLIGRILETRKEALTEKFGIEDFSSEEDILREIGKRKGIIRKGGEVDLEETA RWLLREWQTGRFTLFGKEEEKGQEFVWDFEDVLDGIEKDLLLDPRRILWKYGEELREKLDNTKRVGIREIEGFTVGIATG FKKCDGGIKLLEKLTGKHALASECFGKKWKGVVVIME
Sequences:
>Translated_357_residues MKQRKAWRVVREVIDEADIIVEVVDARDPIGTRNRKLERLVKEEGKPLLIVMNKADLVPKEWAEEYKRKSEIPVVFISAR ERKGTGILRREIKKLAKGLLDYQDKVKVALIGYPNVGKSTIINTLKGKKAVGTAPIPGYTKGKQLIRLSKKIWLLDSPGV VPIDDFDELVIKGGFPADKIEEPVKPALKLIGRILETRKEALTEKFGIEDFSSEEDILREIGKRKGIIRKGGEVDLEETA RWLLREWQTGRFTLFGKEEEKGQEFVWDFEDVLDGIEKDLLLDPRRILWKYGEELREKLDNTKRVGIREIEGFTVGIATG FKKCDGGIKLLEKLTGKHALASECFGKKWKGVVVIME >Mature_357_residues MKQRKAWRVVREVIDEADIIVEVVDARDPIGTRNRKLERLVKEEGKPLLIVMNKADLVPKEWAEEYKRKSEIPVVFISAR ERKGTGILRREIKKLAKGLLDYQDKVKVALIGYPNVGKSTIINTLKGKKAVGTAPIPGYTKGKQLIRLSKKIWLLDSPGV VPIDDFDELVIKGGFPADKIEEPVKPALKLIGRILETRKEALTEKFGIEDFSSEEDILREIGKRKGIIRKGGEVDLEETA RWLLREWQTGRFTLFGKEEEKGQEFVWDFEDVLDGIEKDLLLDPRRILWKYGEELREKLDNTKRVGIREIEGFTVGIATG FKKCDGGIKLLEKLTGKHALASECFGKKWKGVVVIME
Specific function: Unknown
COG id: COG1161
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI7019419, Length=265, Percent_Identity=37.3584905660377, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI296317324, Length=284, Percent_Identity=30.9859154929577, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI9506611, Length=284, Percent_Identity=30.9859154929577, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI45643129, Length=274, Percent_Identity=29.5620437956204, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI45643127, Length=274, Percent_Identity=29.5620437956204, Blast_Score=115, Evalue=6e-26, Organism=Homo sapiens, GI45593130, Length=274, Percent_Identity=29.5620437956204, Blast_Score=115, Evalue=7e-26, Organism=Homo sapiens, GI223029424, Length=162, Percent_Identity=29.6296296296296, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17534827, Length=280, Percent_Identity=31.7857142857143, Blast_Score=151, Evalue=6e-37, Organism=Caenorhabditis elegans, GI32563985, Length=276, Percent_Identity=34.7826086956522, Blast_Score=135, Evalue=4e-32, Organism=Caenorhabditis elegans, GI71990926, Length=276, Percent_Identity=34.7826086956522, Blast_Score=134, Evalue=6e-32, Organism=Caenorhabditis elegans, GI32563983, Length=276, Percent_Identity=34.7826086956522, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI25143545, Length=280, Percent_Identity=30.3571428571429, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI115535155, Length=280, Percent_Identity=30.3571428571429, Blast_Score=108, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6324381, Length=263, Percent_Identity=31.1787072243346, Blast_Score=137, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6320842, Length=294, Percent_Identity=28.9115646258503, Blast_Score=112, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321339, Length=313, Percent_Identity=28.1150159744409, Blast_Score=107, Evalue=3e-24, Organism=Drosophila melanogaster, GI19922460, Length=264, Percent_Identity=35.2272727272727, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI28572990, Length=282, Percent_Identity=29.7872340425532, Blast_Score=122, Evalue=5e-28, Organism=Drosophila melanogaster, GI18543229, Length=176, Percent_Identity=30.6818181818182, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI85815858, Length=296, Percent_Identity=24.6621621621622, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023179 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR000795 [H]
Pfam domain/function: PF00009 GTP_EFTU; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 40687; Mature: 40687
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQRKAWRVVREVIDEADIIVEVVDARDPIGTRNRKLERLVKEEGKPLLIVMNKADLVPK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHH EWAEEYKRKSEIPVVFISARERKGTGILRREIKKLAKGLLDYQDKVKVALIGYPNVGKST HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH IINTLKGKKAVGTAPIPGYTKGKQLIRLSKKIWLLDSPGVVPIDDFDELVIKGGFPADKI HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCHHHHHEECCCCHHHH EEPVKPALKLIGRILETRKEALTEKFGIEDFSSEEDILREIGKRKGIIRKGGEVDLEETA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH RWLLREWQTGRFTLFGKEEEKGQEFVWDFEDVLDGIEKDLLLDPRRILWKYGEELREKLD HHHHHHCCCCCEEEECCCHHCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC NTKRVGIREIEGFTVGIATGFKKCDGGIKLLEKLTGKHALASECFGKKWKGVVVIME CHHCCCCEECCCEEEEHHHCHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEC >Mature Secondary Structure MKQRKAWRVVREVIDEADIIVEVVDARDPIGTRNRKLERLVKEEGKPLLIVMNKADLVPK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHH EWAEEYKRKSEIPVVFISARERKGTGILRREIKKLAKGLLDYQDKVKVALIGYPNVGKST HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHH IINTLKGKKAVGTAPIPGYTKGKQLIRLSKKIWLLDSPGVVPIDDFDELVIKGGFPADKI HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCHHHHHEECCCCHHHH EEPVKPALKLIGRILETRKEALTEKFGIEDFSSEEDILREIGKRKGIIRKGGEVDLEETA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHH RWLLREWQTGRFTLFGKEEEKGQEFVWDFEDVLDGIEKDLLLDPRRILWKYGEELREKLD HHHHHHCCCCCEEEECCCHHCCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC NTKRVGIREIEGFTVGIATGFKKCDGGIKLLEKLTGKHALASECFGKKWKGVVVIME CHHCCCCEECCCEEEEHHHCHHHCCHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]