| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224747
Identifier: 212224747
GI number: 212224747
Start: 1460676
End: 1461164
Strand: Reverse
Name: 212224747
Synonym: TON_1596
Alternate gene names: NA
Gene position: 1461164-1460676 (Counterclockwise)
Preceding gene: 212224748
Following gene: 212224709
Centisome position: 79.08
GC content: 47.85
Gene sequence:
>489_bases ATGTATGACGTTGACGAGATAATTGAGACCCTCCAAAAATTGAACTACGAGGAGGTTCTGGCTTACTGGATAGAAAGTGA AAAGGAGGAGGCAAAATTTTACAAAGAACTAGCAAAAAGAGCCTGGGACCTTGGACTCGGTGAGGGGCTTGTGAAGACTT TTGAGAAGCTTGCTGAGGATTCCCTGGAACACGCAAAAGACCTAGAGGGACAGTTCAGAGTAAAGTACGGCAGAAAGCCG AGGAGTGAAGTTCCACCGCTTGAAGTTCTGCCCCTTCTCGATAAGTTTGAGAGAGCTGACCAGCTCGAGGAAATACTCAA GGCTGCGATGGAGAGCGAGCTGATAGCCCACGAGTCCTACAAGCTCCTAGCTGAAAGGGTTAGGGATGAAGAGCTAAAGA AACTCTATGCAAAGCTGGCCGAAGTAGAGTGGGGCCACTACGAGCTTCTCAAAAAGAGGTACGAAGAACTGAAAGTCAGA GCCATCTAA
Upstream 100 bases:
>100_bases CTCAGCGTCGTGACGTACCTTATTATAGTCATTCTCATATGGTTTGTGAGGTGAACTCAAGATTTTTAGTCCTATGAGAG TAGTGTTATTGTGATTGACC
Downstream 100 bases:
>100_bases CGTCAAAATATAGTAGAAAATCCTTCTTATATTTTTAGATGTCCGTTGTTGTTCCGTTTTTTGTCTTCAAATGCCTTGTT ATAGGTAGCTGTGTCAAAGC
Product: rubrerythrin-related protein
Products: NA
Alternate protein names: Rubrerythrin-Like Protein; Rubrerythrin Subfamily
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MYDVDEIIETLQKLNYEEVLAYWIESEKEEAKFYKELAKRAWDLGLGEGLVKTFEKLAEDSLEHAKDLEGQFRVKYGRKP RSEVPPLEVLPLLDKFERADQLEEILKAAMESELIAHESYKLLAERVRDEELKKLYAKLAEVEWGHYELLKKRYEELKVR AI
Sequences:
>Translated_162_residues MYDVDEIIETLQKLNYEEVLAYWIESEKEEAKFYKELAKRAWDLGLGEGLVKTFEKLAEDSLEHAKDLEGQFRVKYGRKP RSEVPPLEVLPLLDKFERADQLEEILKAAMESELIAHESYKLLAERVRDEELKKLYAKLAEVEWGHYELLKKRYEELKVR AI >Mature_162_residues MYDVDEIIETLQKLNYEEVLAYWIESEKEEAKFYKELAKRAWDLGLGEGLVKTFEKLAEDSLEHAKDLEGQFRVKYGRKP RSEVPPLEVLPLLDKFERADQLEEILKAAMESELIAHESYKLLAERVRDEELKKLYAKLAEVEWGHYELLKKRYEELKVR AI
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19205; Mature: 19205
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDVDEIIETLQKLNYEEVLAYWIESEKEEAKFYKELAKRAWDLGLGEGLVKTFEKLAED CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLEHAKDLEGQFRVKYGRKPRSEVPPLEVLPLLDKFERADQLEEILKAAMESELIAHESY HHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLLAERVRDEELKKLYAKLAEVEWGHYELLKKRYEELKVRAI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYDVDEIIETLQKLNYEEVLAYWIESEKEEAKFYKELAKRAWDLGLGEGLVKTFEKLAED CCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SLEHAKDLEGQFRVKYGRKPRSEVPPLEVLPLLDKFERADQLEEILKAAMESELIAHESY HHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLLAERVRDEELKKLYAKLAEVEWGHYELLKKRYEELKVRAI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA