| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224650
Identifier: 212224650
GI number: 212224650
Start: 1371745
End: 1373418
Strand: Reverse
Name: 212224650
Synonym: TON_1499
Alternate gene names: NA
Gene position: 1373418-1371745 (Counterclockwise)
Preceding gene: 212224651
Following gene: 212224644
Centisome position: 74.33
GC content: 47.67
Gene sequence:
>1674_bases TTGATTTTATTGAGCGTCGCGGCTATTGTGGCCTTAACAAAAGTCCCCCACACTGAAAAACCGACCGCTCAGGGAGTGAT AAGCCCTTCCTGGGGGAACTGGACGGTAAGACGCCTTGAACTTGCCCAGGATCCGGTTACGGGCGGCTGGGACGGTGACG TGTCTTTTACGATACTCCCCACCCTGTACGCGACGTACCACGGGGTTCTGACGTTGGCTCTACTGAACCTGAGCCCTGCG CATCCCCAGAAAACCCGGGAATTTTTGAAGGACTACGAGGGGGAGATCTACAACAGGCAGGATTATTTTTCCGTTGTTGA TGTCTATTACCTGTTAACGCTCCTCAAGGAGTTTAATTTGAGTCTGGGAAGCAGGGAAACCATTGAAAACTTCATCCTTG AAGATATGAAGAAGTCAAACGAGACTTTCTTGCATGCAAAAAGCCTTATTTTACTGAACTCCCCCCTTGCGAAGAACGTT TCCATGTCCCTCTGGCTCTCCCTGAAGCCGGAGCACTCCTTAAATTTTGTGTGGAACTTTCTTCAGCTCAGGGAGCTTCT CGTGATGTCCGGCTATTCCCCTGCGGAGATACCAAATTACACCAGAATGCATGAGCTGGCGAGAACAGTGTTTGATGATG CATCCCGTGAGGTAAATAACCTTGGCTTTTATGATCTTCACACTCTTGCGCGCTTTATGAAGGAAGAAAACATCAAAAAC GAGACACTCAGGAGAGAAATATTGGCCGATATTTCCAAATACAAGTGCTCAGATGGTTCGTACTCCGATACGAATGGGGC CAAAAGGGGGTACATCGACACTACCCACTGGGCAGTGGAAGCGATAACATATCTTGGGGGAGAAGTCGGGACAGACACGG TGCGTTACTTGCGGTCTTTGGAGAGTCCCTTGGGAGGTTTCATAGAGATTCCGTACAGTATAATACCGAACCCGTTGGAC ACAGCTTTCTCGGTGATGACCCTTGGACTTCTGAACTCTACAGTGCCAAGAGAGGAGAAAGTCAAGGACTACCTGCTCTC AGAGCTTTCAGACGAAGACAAACCGAGTGCAATATGGGCAGAGTACAGAGCCTTACGGGTATTAGGTGTCCCCAATGAGA ATCTTAAGAAGATTGTAAAGCCCCGCTTGCAGAACTTCATCACCAACCTGAATCTGTCCGCTGTTTATCACAACCACTAT CTCCTCAAGGATGTATACTATCTGCTTGTAACGAGTAGGGAACTGGGCATTGAAATCGACGAATCATGGAAAGAAACTGT AACCTCCTTCGTTTTGGACTTGAGGGATGATGATGGTGGATTTGGCAGCAAAATATCCAAAATAAAAATTGTTAGGCTCG AAACAACGCTTTACTCAGTTTTAATCCTCAACGAGCTTGGGTACGGTTACAGGGATGGAAAGACAGTGAAGTTTATTGAA TCCAACAGAAACGGCGCCTTGTGGTGGTCTCTGCCAATAACTAGATACGCGCTGCTGGCTCTAAATTCAATGGGGGCCAA AGTTGAAGGCAAAGAAGAGATAGTAAAGGCCCTTGAGCGGAGAAAGTGTCCCTACGGTTTTTTCTCCTACGCTCCCTACG AGAATCCCAAGCAGGGGGATCCGATAGCAACGTTTTTAGCGCTCGATATCCTTAGGCTTCTCGGTTATAGTTAG
Upstream 100 bases:
>100_bases AAAAGGGTGTATTTAGAAGTCTCGATACGAGTACATCCGTGGCAGTAGACTCCTCTGCGTTTTGAGGTGAGACAATGAGA AAAAAATTCTCTCCTCTCTC
Downstream 100 bases:
>100_bases CCACCCACGTTTTTGTTTTTCCAACATTTTTGGATTTAAACCTGTTTACAGGGATAGAAGGCTGACAATCGTCTTTCTTC ACAAATAGATGAAAATGAAA
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MILLSVAAIVALTKVPHTEKPTAQGVISPSWGNWTVRRLELAQDPVTGGWDGDVSFTILPTLYATYHGVLTLALLNLSPA HPQKTREFLKDYEGEIYNRQDYFSVVDVYYLLTLLKEFNLSLGSRETIENFILEDMKKSNETFLHAKSLILLNSPLAKNV SMSLWLSLKPEHSLNFVWNFLQLRELLVMSGYSPAEIPNYTRMHELARTVFDDASREVNNLGFYDLHTLARFMKEENIKN ETLRREILADISKYKCSDGSYSDTNGAKRGYIDTTHWAVEAITYLGGEVGTDTVRYLRSLESPLGGFIEIPYSIIPNPLD TAFSVMTLGLLNSTVPREEKVKDYLLSELSDEDKPSAIWAEYRALRVLGVPNENLKKIVKPRLQNFITNLNLSAVYHNHY LLKDVYYLLVTSRELGIEIDESWKETVTSFVLDLRDDDGGFGSKISKIKIVRLETTLYSVLILNELGYGYRDGKTVKFIE SNRNGALWWSLPITRYALLALNSMGAKVEGKEEIVKALERRKCPYGFFSYAPYENPKQGDPIATFLALDILRLLGYS
Sequences:
>Translated_557_residues MILLSVAAIVALTKVPHTEKPTAQGVISPSWGNWTVRRLELAQDPVTGGWDGDVSFTILPTLYATYHGVLTLALLNLSPA HPQKTREFLKDYEGEIYNRQDYFSVVDVYYLLTLLKEFNLSLGSRETIENFILEDMKKSNETFLHAKSLILLNSPLAKNV SMSLWLSLKPEHSLNFVWNFLQLRELLVMSGYSPAEIPNYTRMHELARTVFDDASREVNNLGFYDLHTLARFMKEENIKN ETLRREILADISKYKCSDGSYSDTNGAKRGYIDTTHWAVEAITYLGGEVGTDTVRYLRSLESPLGGFIEIPYSIIPNPLD TAFSVMTLGLLNSTVPREEKVKDYLLSELSDEDKPSAIWAEYRALRVLGVPNENLKKIVKPRLQNFITNLNLSAVYHNHY LLKDVYYLLVTSRELGIEIDESWKETVTSFVLDLRDDDGGFGSKISKIKIVRLETTLYSVLILNELGYGYRDGKTVKFIE SNRNGALWWSLPITRYALLALNSMGAKVEGKEEIVKALERRKCPYGFFSYAPYENPKQGDPIATFLALDILRLLGYS >Mature_557_residues MILLSVAAIVALTKVPHTEKPTAQGVISPSWGNWTVRRLELAQDPVTGGWDGDVSFTILPTLYATYHGVLTLALLNLSPA HPQKTREFLKDYEGEIYNRQDYFSVVDVYYLLTLLKEFNLSLGSRETIENFILEDMKKSNETFLHAKSLILLNSPLAKNV SMSLWLSLKPEHSLNFVWNFLQLRELLVMSGYSPAEIPNYTRMHELARTVFDDASREVNNLGFYDLHTLARFMKEENIKN ETLRREILADISKYKCSDGSYSDTNGAKRGYIDTTHWAVEAITYLGGEVGTDTVRYLRSLESPLGGFIEIPYSIIPNPLD TAFSVMTLGLLNSTVPREEKVKDYLLSELSDEDKPSAIWAEYRALRVLGVPNENLKKIVKPRLQNFITNLNLSAVYHNHY LLKDVYYLLVTSRELGIEIDESWKETVTSFVLDLRDDDGGFGSKISKIKIVRLETTLYSVLILNELGYGYRDGKTVKFIE SNRNGALWWSLPITRYALLALNSMGAKVEGKEEIVKALERRKCPYGFFSYAPYENPKQGDPIATFLALDILRLLGYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63315; Mature: 63315
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLSVAAIVALTKVPHTEKPTAQGVISPSWGNWTVRRLELAQDPVTGGWDGDVSFTILP CHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEEEHHCCCCCCCCCCCEEEEEHH TLYATYHGVLTLALLNLSPAHPQKTREFLKDYEGEIYNRQDYFSVVDVYYLLTLLKEFNL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC SLGSRETIENFILEDMKKSNETFLHAKSLILLNSPLAKNVSMSLWLSLKPEHSLNFVWNF CCCCHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCCCCCCEEEEEEEECCCCCHHHHHHH LQLRELLVMSGYSPAEIPNYTRMHELARTVFDDASREVNNLGFYDLHTLARFMKEENIKN HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH ETLRREILADISKYKCSDGSYSDTNGAKRGYIDTTHWAVEAITYLGGEVGTDTVRYLRSL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ESPLGGFIEIPYSIIPNPLDTAFSVMTLGLLNSTVPREEKVKDYLLSELSDEDKPSAIWA CCCCCCEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHH EYRALRVLGVPNENLKKIVKPRLQNFITNLNLSAVYHNHYLLKDVYYLLVTSRELGIEID HHHHEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHCCEEC ESWKETVTSFVLDLRDDDGGFGSKISKIKIVRLETTLYSVLILNELGYGYRDGKTVKFIE HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEE SNRNGALWWSLPITRYALLALNSMGAKVEGKEEIVKALERRKCPYGFFSYAPYENPKQGD CCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PIATFLALDILRLLGYS HHHHHHHHHHHHHHCCC >Mature Secondary Structure MILLSVAAIVALTKVPHTEKPTAQGVISPSWGNWTVRRLELAQDPVTGGWDGDVSFTILP CHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEEEHHCCCCCCCCCCCEEEEEHH TLYATYHGVLTLALLNLSPAHPQKTREFLKDYEGEIYNRQDYFSVVDVYYLLTLLKEFNL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC SLGSRETIENFILEDMKKSNETFLHAKSLILLNSPLAKNVSMSLWLSLKPEHSLNFVWNF CCCCHHHHHHHHHHHHHHCCCHHHHHHHEEEECCCCCCCCEEEEEEEECCCCCHHHHHHH LQLRELLVMSGYSPAEIPNYTRMHELARTVFDDASREVNNLGFYDLHTLARFMKEENIKN HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHH ETLRREILADISKYKCSDGSYSDTNGAKRGYIDTTHWAVEAITYLGGEVGTDTVRYLRSL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH ESPLGGFIEIPYSIIPNPLDTAFSVMTLGLLNSTVPREEKVKDYLLSELSDEDKPSAIWA CCCCCCEEECCHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHH EYRALRVLGVPNENLKKIVKPRLQNFITNLNLSAVYHNHYLLKDVYYLLVTSRELGIEID HHHHEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHCCEEC ESWKETVTSFVLDLRDDDGGFGSKISKIKIVRLETTLYSVLILNELGYGYRDGKTVKFIE HHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCEEEEEE SNRNGALWWSLPITRYALLALNSMGAKVEGKEEIVKALERRKCPYGFFSYAPYENPKQGD CCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PIATFLALDILRLLGYS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA