Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224610

Identifier: 212224610

GI number: 212224610

Start: 1335446

End: 1335991

Strand: Reverse

Name: 212224610

Synonym: TON_1459

Alternate gene names: NA

Gene position: 1335991-1335446 (Counterclockwise)

Preceding gene: 212224612

Following gene: 212224609

Centisome position: 72.31

GC content: 51.47

Gene sequence:

>546_bases
ATGGACATCTTCAGCAAACTCATCGCGAAGAAGTTCAAGAACATCGCGGGCGACAGGTACGAAGAGATAACGAAGCGCTA
TCGGGAGTTCCTTCTCCTTCCTGAGGAGTTCGTTCTTCCAGAGATAAACTCGATTCTGATTCCCATTGACCGCTTTGCCC
ACGGGATTCCATCCGAGCTCTACGAAACGCTTGAGGCCTACGCCGGGGCGTCAGTTACACTTGTTTACGTCTCCGAGAGC
ATGGCATTCAGAATGATTGAGCAGACCCTCGGAAAGCTTGAGGCCGAAAAACTGAAGATCGCTGAAAGGGCGTTGGGGGA
GAAGATGCTCACGGAAATAGCGTCTAGCCTGAATGATATCGGTCTGAGGGTAAGCAAGAGGCACATATTCGGGAGCAAGA
GTGACGTCGTTATCAAACTCGCCGAAGAGTTTGACCTCCTCGTGATCTCACGGGGCTACGGCTCGGAGATAACCAAGATG
TCCCCGCTCAGCCCGGTCGTCCTTAAGATAGTCCAGCACGTGGTTAAGCCAACGATAATTTATTAG

Upstream 100 bases:

>100_bases
TAGCTCGTTAAGGCATAATAAAGCGTTTGTGGTTCAACCCTCTAAAATGGGCGGCAAAAAGCTTAAATCATCTCTTTATC
CTCCCAGGTTGGGGGTGGTT

Downstream 100 bases:

>100_bases
GTGATGCCGATGGAGCAGGTGATCATAGCGGTTGCAGTGTTCCTCTTTACATATGCGCTCATAATCAGCGAGAGAGTTCA
CAGAACTGTAGCGGCTCTCT

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MDIFSKLIAKKFKNIAGDRYEEITKRYREFLLLPEEFVLPEINSILIPIDRFAHGIPSELYETLEAYAGASVTLVYVSES
MAFRMIEQTLGKLEAEKLKIAERALGEKMLTEIASSLNDIGLRVSKRHIFGSKSDVVIKLAEEFDLLVISRGYGSEITKM
SPLSPVVLKIVQHVVKPTIIY

Sequences:

>Translated_181_residues
MDIFSKLIAKKFKNIAGDRYEEITKRYREFLLLPEEFVLPEINSILIPIDRFAHGIPSELYETLEAYAGASVTLVYVSES
MAFRMIEQTLGKLEAEKLKIAERALGEKMLTEIASSLNDIGLRVSKRHIFGSKSDVVIKLAEEFDLLVISRGYGSEITKM
SPLSPVVLKIVQHVVKPTIIY
>Mature_181_residues
MDIFSKLIAKKFKNIAGDRYEEITKRYREFLLLPEEFVLPEINSILIPIDRFAHGIPSELYETLEAYAGASVTLVYVSES
MAFRMIEQTLGKLEAEKLKIAERALGEKMLTEIASSLNDIGLRVSKRHIFGSKSDVVIKLAEEFDLLVISRGYGSEITKM
SPLSPVVLKIVQHVVKPTIIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20464; Mature: 20464

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIFSKLIAKKFKNIAGDRYEEITKRYREFLLLPEEFVLPEINSILIPIDRFAHGIPSEL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHEEEHHHHHCCCCHHH
YETLEAYAGASVTLVYVSESMAFRMIEQTLGKLEAEKLKIAERALGEKMLTEIASSLNDI
HHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRVSKRHIFGSKSDVVIKLAEEFDLLVISRGYGSEITKMSPLSPVVLKIVQHVVKPTII
HHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Y
C
>Mature Secondary Structure
MDIFSKLIAKKFKNIAGDRYEEITKRYREFLLLPEEFVLPEINSILIPIDRFAHGIPSEL
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHEEEHHHHHCCCCHHH
YETLEAYAGASVTLVYVSESMAFRMIEQTLGKLEAEKLKIAERALGEKMLTEIASSLNDI
HHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRVSKRHIFGSKSDVVIKLAEEFDLLVISRGYGSEITKMSPLSPVVLKIVQHVVKPTII
HHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA