Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224608

Identifier: 212224608

GI number: 212224608

Start: 1333706

End: 1334155

Strand: Reverse

Name: 212224608

Synonym: TON_1457

Alternate gene names: NA

Gene position: 1334155-1333706 (Counterclockwise)

Preceding gene: 212224609

Following gene: 212224605

Centisome position: 72.21

GC content: 52.44

Gene sequence:

>450_bases
ATGAGGATACTCGTGCTCGTTGATGGCTCAAAGTGGAGTCAGAAGGCGGCGCTTCATGCTATCTCGATGGCCAAGAAAAA
GAAGGGTAAGGTCACCCTCTTCTCGGTTCTCGACAGAAGGGAGGCGAAGGCCCTTGCTTTCAATATGGGCATGCTGAGCC
AGGATTTGAAAAACGTCCAGAAGTTCGAGGAGGAGATCTGGAGGGAAATGAAGAAGAGCATAAGGGACATAATGACGAAC
CTCCTTGAGCTCTGCCACCAGGAAGAGGTAAATTGCTCATTCAGGATAGTAGAGGGGAACGCGAAGGAGAAAATCCTTGA
GGAGGCGAACTCCGGGAAGTATGGCCTTGTTGTCATGGGGGCCTACGGAAGGAGCGGAAAGACGAGAATAGGAAGCCTGC
TTGAGGAGGTCGTGGGCTCCATAGAGCCGCCCGTCATGATCGTCCGCTAA

Upstream 100 bases:

>100_bases
CACCTTCATGGACTTCCTGAAGATAGGCCTGGTCATAATGTTCACAACGGTTGCTGCTGGCATGGGCCTGCTCTGGATTA
GGTACATAGGGGTGTGAACG

Downstream 100 bases:

>100_bases
CGCTTCCATAGTGCCAGGACGAAGAGGAGCAGGACGATTACCTCCAGTCCGCCCACGGCTATGCTTATGTCTCTCTCTAT
CCACGCGGCCAAGTGAAGTG

Product: universal stress protein

Products: NA

Alternate protein names: Universal Stress Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MRILVLVDGSKWSQKAALHAISMAKKKKGKVTLFSVLDRREAKALAFNMGMLSQDLKNVQKFEEEIWREMKKSIRDIMTN
LLELCHQEEVNCSFRIVEGNAKEKILEEANSGKYGLVVMGAYGRSGKTRIGSLLEEVVGSIEPPVMIVR

Sequences:

>Translated_149_residues
MRILVLVDGSKWSQKAALHAISMAKKKKGKVTLFSVLDRREAKALAFNMGMLSQDLKNVQKFEEEIWREMKKSIRDIMTN
LLELCHQEEVNCSFRIVEGNAKEKILEEANSGKYGLVVMGAYGRSGKTRIGSLLEEVVGSIEPPVMIVR
>Mature_149_residues
MRILVLVDGSKWSQKAALHAISMAKKKKGKVTLFSVLDRREAKALAFNMGMLSQDLKNVQKFEEEIWREMKKSIRDIMTN
LLELCHQEEVNCSFRIVEGNAKEKILEEANSGKYGLVVMGAYGRSGKTRIGSLLEEVVGSIEPPVMIVR

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16798; Mature: 16798

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILVLVDGSKWSQKAALHAISMAKKKKGKVTLFSVLDRREAKALAFNMGMLSQDLKNVQ
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFEEEIWREMKKSIRDIMTNLLELCHQEEVNCSFRIVEGNAKEKILEEANSGKYGLVVMG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEE
AYGRSGKTRIGSLLEEVVGSIEPPVMIVR
CCCCCCHHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MRILVLVDGSKWSQKAALHAISMAKKKKGKVTLFSVLDRREAKALAFNMGMLSQDLKNVQ
CEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFEEEIWREMKKSIRDIMTNLLELCHQEEVNCSFRIVEGNAKEKILEEANSGKYGLVVMG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCEEEEEEE
AYGRSGKTRIGSLLEEVVGSIEPPVMIVR
CCCCCCHHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA