Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is amyM [H]

Identifier: 212224602

GI number: 212224602

Start: 1327289

End: 1329445

Strand: Reverse

Name: amyM [H]

Synonym: TON_1451

Alternate gene names: 212224602

Gene position: 1329445-1327289 (Counterclockwise)

Preceding gene: 212224603

Following gene: 212224600

Centisome position: 71.95

GC content: 54.66

Gene sequence:

>2157_bases
ATGAAGCGAGCACTCGTGCTGGTTTTCATACTCCTTCTCATCCTGCCCTCAGTGGAGGCGTACAGCGTCCCCGAGCGCGG
GGTCATCTATCAGGTCATGGTGGACAGGTTCTACGACGGTAACCAGAGCAACAACGAACCCTTCTACGATCCAATGCACA
CCAACTACCGCCTCTACTGGGGCGGCGATCTGGAGGGTCTTATAGAGAAGCTCGACTACATCCAGAGCCTCGGTGTCTCG
ATGATATGGCTCTCGCCCCTGAACGACAACATCAACAGGATGGCCGGTGGAAGCGCTCCCTACCATGGCTACTGGACGCA
CGACTATAAACGCATAGAGGAGCACTTCGGTGACTGGAAAACCTTCAAGAGGCTCGTTGAAGATGCAGAAAAGAGGGGAA
TCTGCATCATCGTTGACTACGTTCCCAATCATTCGAACCCTGCGACGGACGGTGAACTCGGCTCGCTCTACGACAACGGA
ACGCTCGTGACGAACTACTATTACGACGCCAAAAATGCAACGGTGAACCCCTACACCGGCAGTAAGGAGTTAATATATCA
CCACAATGGGGACATAGGCGACTGGTTTGGCTTTCAGCTCAAATACGCTAACCTCTTTGGCTTAGCCGACTTCAATCAGC
TCAACCCCTGGGTGGATTCATACCTGAAGGACGGTGCGAGGCTCTTCGTCGAGGCCGGCGCCTGCGGCTTCAGGATCGAC
GCAGTAAAGCATATGGATCTGGGATGGCTGGAGAGCTTCTACCTGGACCTCTACTCGAGCTCTGAAAGGCCGCTCTTCAT
CTACGGTGAGTACTACTCCCTCAGCCCCCAGAAAACCGACGATATGTACTACTTCTACCTCTACTCGAACGTCTCCCCCT
TGCTCGGTATACCGATAAGGAACGACATCGTGAGAACCTTCGCCTACGGAGGAAGCATGAAGGATCTCGCGAGGGAGCTC
GAGGATTATTATTCACTCTTTGTTTATCCCAACAAACAGGTAAACTTCCTCGACAGCCACGACCTCGTTCGCTTCCTCAA
CGAGAACCATCGTCTGGATCGCTACCACATGGCGCTAGCACTGACAATGACTCTTCCTGGCATTCCGGTTATCTACTACG
GCGACGAGAGCTATCTGGTTAGCAAGGACGGAAAGGGCGACCCCTACAACAGGCCCATGATGGTCTTCAACAACACAACG
GAGGCGGCGCGGATAATCAGAACCCTTGCGGAGCTGAGGAAGACCAACGACGCTTTAGCCTTCGGCGACTTCAGAACCCT
CTACGCTGACTACAACGTCTGGGCATTTGAGAGAGCCTTCGGGGCTCATAGACTCCTTGTGGTCATGAACAAGGGCCCGG
ACAAAAACCTCACGCTTTCGCTCGACTGGAGCGATGGGAGATACGTCGATGCCCTCCACGGGGCCGAAATGGTGGTTGAA
AATGGTAGAGCAAGCGTGACACTCCCGCGCAATTCCATCTACATCTTCCACGTGGAGGGCGAGCAGAAAGAACCTCTCAT
AGGCTCGCTCACGCCTTACACGGCTCAACCGGGCCAGAGGGTTCTCGTAGCCGGAGCGGGCTTTGGAAACGATGGAGAGG
TATTCATCGGCGGCGAGAAGGCGAAGGTGCTCTCGTGGGAGGACGACCAGATACTCGTTGAGGTCCCTGAGGTGGAAACT
GAGGACTCGTGGATTTCCGTCTACGTTGAGACGAGTTACGGAAAGAGTAACACCGTAAAGCTGCACTACTATTCCAGCGG
GGACGTCCCTTCACTGATAGTCGTCAATGGCAGCAACCTGACGGGCTCCCTTTGGATTAAAGGAAGCCTTCCGGAGTTGG
CCGAGCCGAGGCCGCTGATAAAGTCGAGCACGGGCTACTACTTTACAGTCGTGCCGCTCCCCAACGGGACGATTTTCTCG
GTCGAGCTCTACAGGGGTCTGCCATGGGATGAACTTGAGCCGCTCAACATCACCCTCTACGGGAGGACAAACTCAACGGT
TCTCCTTAGCACGGAACTCACAGAAATTCCGACGGAAAGATTGACCACAACGTCCCCAGAAATGCCGGGCAAATCCCCGG
ACTGGATCCCCTACGTGGCCCTTGTGACAATTGGGGCACTCCTGCTCCTGTTGGCCTTTAGAAAGGGCAGGCTTTGA

Upstream 100 bases:

>100_bases
AACGATGAGATAATGGGTTCCAACATCTCCCTGCGCTTCAGAGACATAGCCGGAATATGAACTTTTTTAAGCCCTTTCCC
TTATCACTTCTGGTGATATA

Downstream 100 bases:

>100_bases
TTTTTCTCCCTTTTGGGGAGATTAGGGGAAAAACTAAATCTGCTCCAACAGCTTCTTTCTCTTTTCCTCGTACTCCTCCT
GAGTAATAACGCCCATATCG

Product: cyclomaltodextrin glucanotransferase

Products: NA

Alternate protein names: Glucan 1,4-alpha-maltohydrolase [H]

Number of amino acids: Translated: 718; Mature: 718

Protein sequence:

>718_residues
MKRALVLVFILLLILPSVEAYSVPERGVIYQVMVDRFYDGNQSNNEPFYDPMHTNYRLYWGGDLEGLIEKLDYIQSLGVS
MIWLSPLNDNINRMAGGSAPYHGYWTHDYKRIEEHFGDWKTFKRLVEDAEKRGICIIVDYVPNHSNPATDGELGSLYDNG
TLVTNYYYDAKNATVNPYTGSKELIYHHNGDIGDWFGFQLKYANLFGLADFNQLNPWVDSYLKDGARLFVEAGACGFRID
AVKHMDLGWLESFYLDLYSSSERPLFIYGEYYSLSPQKTDDMYYFYLYSNVSPLLGIPIRNDIVRTFAYGGSMKDLAREL
EDYYSLFVYPNKQVNFLDSHDLVRFLNENHRLDRYHMALALTMTLPGIPVIYYGDESYLVSKDGKGDPYNRPMMVFNNTT
EAARIIRTLAELRKTNDALAFGDFRTLYADYNVWAFERAFGAHRLLVVMNKGPDKNLTLSLDWSDGRYVDALHGAEMVVE
NGRASVTLPRNSIYIFHVEGEQKEPLIGSLTPYTAQPGQRVLVAGAGFGNDGEVFIGGEKAKVLSWEDDQILVEVPEVET
EDSWISVYVETSYGKSNTVKLHYYSSGDVPSLIVVNGSNLTGSLWIKGSLPELAEPRPLIKSSTGYYFTVVPLPNGTIFS
VELYRGLPWDELEPLNITLYGRTNSTVLLSTELTEIPTERLTTTSPEMPGKSPDWIPYVALVTIGALLLLLAFRKGRL

Sequences:

>Translated_718_residues
MKRALVLVFILLLILPSVEAYSVPERGVIYQVMVDRFYDGNQSNNEPFYDPMHTNYRLYWGGDLEGLIEKLDYIQSLGVS
MIWLSPLNDNINRMAGGSAPYHGYWTHDYKRIEEHFGDWKTFKRLVEDAEKRGICIIVDYVPNHSNPATDGELGSLYDNG
TLVTNYYYDAKNATVNPYTGSKELIYHHNGDIGDWFGFQLKYANLFGLADFNQLNPWVDSYLKDGARLFVEAGACGFRID
AVKHMDLGWLESFYLDLYSSSERPLFIYGEYYSLSPQKTDDMYYFYLYSNVSPLLGIPIRNDIVRTFAYGGSMKDLAREL
EDYYSLFVYPNKQVNFLDSHDLVRFLNENHRLDRYHMALALTMTLPGIPVIYYGDESYLVSKDGKGDPYNRPMMVFNNTT
EAARIIRTLAELRKTNDALAFGDFRTLYADYNVWAFERAFGAHRLLVVMNKGPDKNLTLSLDWSDGRYVDALHGAEMVVE
NGRASVTLPRNSIYIFHVEGEQKEPLIGSLTPYTAQPGQRVLVAGAGFGNDGEVFIGGEKAKVLSWEDDQILVEVPEVET
EDSWISVYVETSYGKSNTVKLHYYSSGDVPSLIVVNGSNLTGSLWIKGSLPELAEPRPLIKSSTGYYFTVVPLPNGTIFS
VELYRGLPWDELEPLNITLYGRTNSTVLLSTELTEIPTERLTTTSPEMPGKSPDWIPYVALVTIGALLLLLAFRKGRL
>Mature_718_residues
MKRALVLVFILLLILPSVEAYSVPERGVIYQVMVDRFYDGNQSNNEPFYDPMHTNYRLYWGGDLEGLIEKLDYIQSLGVS
MIWLSPLNDNINRMAGGSAPYHGYWTHDYKRIEEHFGDWKTFKRLVEDAEKRGICIIVDYVPNHSNPATDGELGSLYDNG
TLVTNYYYDAKNATVNPYTGSKELIYHHNGDIGDWFGFQLKYANLFGLADFNQLNPWVDSYLKDGARLFVEAGACGFRID
AVKHMDLGWLESFYLDLYSSSERPLFIYGEYYSLSPQKTDDMYYFYLYSNVSPLLGIPIRNDIVRTFAYGGSMKDLAREL
EDYYSLFVYPNKQVNFLDSHDLVRFLNENHRLDRYHMALALTMTLPGIPVIYYGDESYLVSKDGKGDPYNRPMMVFNNTT
EAARIIRTLAELRKTNDALAFGDFRTLYADYNVWAFERAFGAHRLLVVMNKGPDKNLTLSLDWSDGRYVDALHGAEMVVE
NGRASVTLPRNSIYIFHVEGEQKEPLIGSLTPYTAQPGQRVLVAGAGFGNDGEVFIGGEKAKVLSWEDDQILVEVPEVET
EDSWISVYVETSYGKSNTVKLHYYSSGDVPSLIVVNGSNLTGSLWIKGSLPELAEPRPLIKSSTGYYFTVVPLPNGTIFS
VELYRGLPWDELEPLNITLYGRTNSTVLLSTELTEIPTERLTTTSPEMPGKSPDWIPYVALVTIGALLLLLAFRKGRL

Specific function: Converts starch into maltose [H]

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 IPT/TIG domain [H]

Homologues:

Organism=Escherichia coli, GI1786604, Length=426, Percent_Identity=27.4647887323944, Blast_Score=109, Evalue=5e-25,
Organism=Escherichia coli, GI1789995, Length=525, Percent_Identity=22.6666666666667, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI45549022, Length=241, Percent_Identity=29.045643153527, Blast_Score=83, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24586591, Length=190, Percent_Identity=32.1052631578947, Blast_Score=82, Evalue=2e-15,
Organism=Drosophila melanogaster, GI221330053, Length=197, Percent_Identity=32.48730964467, Blast_Score=79, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24586597, Length=190, Percent_Identity=31.5789473684211, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24586599, Length=190, Percent_Identity=30, Blast_Score=75, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24586589, Length=389, Percent_Identity=24.4215938303342, Blast_Score=74, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24586593, Length=187, Percent_Identity=31.0160427807487, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24583747, Length=193, Percent_Identity=29.5336787564767, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24583749, Length=193, Percent_Identity=29.5336787564767, Blast_Score=72, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24583745, Length=192, Percent_Identity=26.5625, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17137384, Length=315, Percent_Identity=26.984126984127, Blast_Score=69, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24586587, Length=193, Percent_Identity=27.979274611399, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006048
- InterPro:   IPR013784
- InterPro:   IPR006046
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR002044
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756
- InterPro:   IPR002909 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF00686 CBM_20; PF01833 TIG [H]

EC number: =3.2.1.133 [H]

Molecular weight: Translated: 81451; Mature: 81451

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRALVLVFILLLILPSVEAYSVPERGVIYQVMVDRFYDGNQSNNEPFYDPMHTNYRLYW
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEE
GGDLEGLIEKLDYIQSLGVSMIWLSPLNDNINRMAGGSAPYHGYWTHDYKRIEEHFGDWK
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCEECHHHHHHHHHCCCHH
TFKRLVEDAEKRGICIIVDYVPNHSNPATDGELGSLYDNGTLVTNYYYDAKNATVNPYTG
HHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCEECCCCC
SKELIYHHNGDIGDWFGFQLKYANLFGLADFNQLNPWVDSYLKDGARLFVEAGACGFRID
CCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCEEEE
AVKHMDLGWLESFYLDLYSSSERPLFIYGEYYSLSPQKTDDMYYFYLYSNVSPLLGIPIR
CEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCEEECCCH
NDIVRTFAYGGSMKDLARELEDYYSLFVYPNKQVNFLDSHDLVRFLNENHRLDRYHMALA
HHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHCCCCCCCCEEEEEE
LTMTLPGIPVIYYGDESYLVSKDGKGDPYNRPMMVFNNTTEAARIIRTLAELRKTNDALA
EEEECCCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEE
FGDFRTLYADYNVWAFERAFGAHRLLVVMNKGPDKNLTLSLDWSDGRYVDALHGAEMVVE
ECCEEEEEECCCEEEEHHCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEECCCCEEEEE
NGRASVTLPRNSIYIFHVEGEQKEPLIGSLTPYTAQPGQRVLVAGAGFGNDGEVFIGGEK
CCCEEEEECCCEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCC
AKVLSWEDDQILVEVPEVETEDSWISVYVETSYGKSNTVKLHYYSSGDVPSLIVVNGSNL
EEEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCC
TGSLWIKGSLPELAEPRPLIKSSTGYYFTVVPLPNGTIFSVELYRGLPWDELEPLNITLY
EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEE
GRTNSTVLLSTELTEIPTERLTTTSPEMPGKSPDWIPYVALVTIGALLLLLAFRKGRL
ECCCCEEEEEECHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRALVLVFILLLILPSVEAYSVPERGVIYQVMVDRFYDGNQSNNEPFYDPMHTNYRLYW
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCCCEEEEE
GGDLEGLIEKLDYIQSLGVSMIWLSPLNDNINRMAGGSAPYHGYWTHDYKRIEEHFGDWK
CCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHCCCCCCCCCEECHHHHHHHHHCCCHH
TFKRLVEDAEKRGICIIVDYVPNHSNPATDGELGSLYDNGTLVTNYYYDAKNATVNPYTG
HHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCEECCCEEEEEEEEECCCCEECCCCC
SKELIYHHNGDIGDWFGFQLKYANLFGLADFNQLNPWVDSYLKDGARLFVEAGACGFRID
CCEEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCHHHHHHHCCCEEEEEEECCCCEEEE
AVKHMDLGWLESFYLDLYSSSERPLFIYGEYYSLSPQKTDDMYYFYLYSNVSPLLGIPIR
CEEECCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCEEECCCH
NDIVRTFAYGGSMKDLARELEDYYSLFVYPNKQVNFLDSHDLVRFLNENHRLDRYHMALA
HHHHHHHHCCCCHHHHHHHHHHHEEEEEECCCCEEECCHHHHHHHHCCCCCCCCEEEEEE
LTMTLPGIPVIYYGDESYLVSKDGKGDPYNRPMMVFNNTTEAARIIRTLAELRKTNDALA
EEEECCCCEEEEECCCEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCEE
FGDFRTLYADYNVWAFERAFGAHRLLVVMNKGPDKNLTLSLDWSDGRYVDALHGAEMVVE
ECCEEEEEECCCEEEEHHCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEECCCCEEEEE
NGRASVTLPRNSIYIFHVEGEQKEPLIGSLTPYTAQPGQRVLVAGAGFGNDGEVFIGGEK
CCCEEEEECCCEEEEEEECCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEECCCC
AKVLSWEDDQILVEVPEVETEDSWISVYVETSYGKSNTVKLHYYSSGDVPSLIVVNGSNL
EEEEEECCCEEEEECCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCC
TGSLWIKGSLPELAEPRPLIKSSTGYYFTVVPLPNGTIFSVELYRGLPWDELEPLNITLY
EEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCEEEEEE
GRTNSTVLLSTELTEIPTERLTTTSPEMPGKSPDWIPYVALVTIGALLLLLAFRKGRL
ECCCCEEEEEECHHHCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10387084 [H]