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The map label for this gene is sgcQ [C]

Identifier: 212224600

GI number: 212224600

Start: 1325659

End: 1326444

Strand: Reverse

Name: sgcQ [C]

Synonym: TON_1449

Alternate gene names: 212224600

Gene position: 1326444-1325659 (Counterclockwise)

Preceding gene: 212224602

Following gene: 212224599

Centisome position: 71.79

GC content: 53.69

Gene sequence:

>786_bases
ATGGACTTTGAGAAAAAGCTCCTTATCGGGATGGTGCACCTCAAGCCCCTGCCGGGTTCATACCTCTACGATGGTGACTT
TGATTCCCTCATTGAGCGGGCCATAGCGGACGCGAGAACGATTGAGGAAGCTGGCTTCGACGCGATCATGGTGGAAAACT
TCGGGGACGTGCCCTTCCCGAAGTATGTTGACAAAACTACAGTCGCGTCTCTGGCGGTCGTTGCCAGGGCCATACGTGAG
GAGGTTTCAATTCCCCTCGGGATAAACGTCCTCAGGAACGACGGAGTTGCAGCCTATTCGATTGCCTACGCCGTAAAGGC
CGATTTCATCAGAGTGAACGTCCTGAGTGGAGTGGCCTACACCGACCAAGGAATAATAGAGGGCATAGCCCACGAACTCG
CCCGGATCAAGAAGCTGCTTCCGAGCAAAATCAAGATCTTTGCTGACGTCCACGTCAAACACGCGGTTCATTTCGGGGAC
TTCGAGGACGCCTTGCTGGACACCGTAGAGAGAGGTCTTGCCGATGCAGTCGTGGTTAGTGGGAGGGCAACAGGAAAGCC
TGTTGACCTAGAAAAGCTCGCCCTGGCGAAGAAAATCTCCCCCGTGCCGGTCGTAGTTGGTTCTGGAACTTCCTATGACA
ACCTTCCTCTGCTCTGGAAGCATGCGGATGGCTTCATAATTGGCACGTGGATAAAGCGCGGGGGGAAAGTCGAGAACGAG
GTCTCGCTTGAGAGGGCCAGAAAACTGGTTGAACTTGTGAAAAATCTTCGGGAAAGCTTGTTCTGA

Upstream 100 bases:

>100_bases
GACTTCCTTAGGTCTCTCTTTCAGCTCTGCTTCTATCCTGATACGTTCCACCTGGGCAAAGTTTAATATCTCTCCTTCCA
ACCCTAACTGGTGGTATTCC

Downstream 100 bases:

>100_bases
ATTTTCCAATTTCGAATTTTCTTTTCCAAAAGCCTTATTACCCATAACTGCGTAATTTGTAGAAATGCAAGCCCTGTCCC
GCTTTTCTTTTCCACGAGAT

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MDFEKKLLIGMVHLKPLPGSYLYDGDFDSLIERAIADARTIEEAGFDAIMVENFGDVPFPKYVDKTTVASLAVVARAIRE
EVSIPLGINVLRNDGVAAYSIAYAVKADFIRVNVLSGVAYTDQGIIEGIAHELARIKKLLPSKIKIFADVHVKHAVHFGD
FEDALLDTVERGLADAVVVSGRATGKPVDLEKLALAKKISPVPVVVGSGTSYDNLPLLWKHADGFIIGTWIKRGGKVENE
VSLERARKLVELVKNLRESLF

Sequences:

>Translated_261_residues
MDFEKKLLIGMVHLKPLPGSYLYDGDFDSLIERAIADARTIEEAGFDAIMVENFGDVPFPKYVDKTTVASLAVVARAIRE
EVSIPLGINVLRNDGVAAYSIAYAVKADFIRVNVLSGVAYTDQGIIEGIAHELARIKKLLPSKIKIFADVHVKHAVHFGD
FEDALLDTVERGLADAVVVSGRATGKPVDLEKLALAKKISPVPVVVGSGTSYDNLPLLWKHADGFIIGTWIKRGGKVENE
VSLERARKLVELVKNLRESLF
>Mature_261_residues
MDFEKKLLIGMVHLKPLPGSYLYDGDFDSLIERAIADARTIEEAGFDAIMVENFGDVPFPKYVDKTTVASLAVVARAIRE
EVSIPLGINVLRNDGVAAYSIAYAVKADFIRVNVLSGVAYTDQGIIEGIAHELARIKKLLPSKIKIFADVHVKHAVHFGD
FEDALLDTVERGLADAVVVSGRATGKPVDLEKLALAKKISPVPVVVGSGTSYDNLPLLWKHADGFIIGTWIKRGGKVENE
VSLERARKLVELVKNLRESLF

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=259, Percent_Identity=28.957528957529, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115532828, Length=267, Percent_Identity=28.8389513108614, Blast_Score=107, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24659916, Length=263, Percent_Identity=32.319391634981, Blast_Score=132, Evalue=3e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 28535; Mature: 28535

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFEKKLLIGMVHLKPLPGSYLYDGDFDSLIERAIADARTIEEAGFDAIMVENFGDVPFP
CCCHHHHHHHHEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
KYVDKTTVASLAVVARAIREEVSIPLGINVLRNDGVAAYSIAYAVKADFIRVNVLSGVAY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEECCCEE
TDQGIIEGIAHELARIKKLLPSKIKIFADVHVKHAVHFGDFEDALLDTVERGLADAVVVS
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCHHHEEEC
GRATGKPVDLEKLALAKKISPVPVVVGSGTSYDNLPLLWKHADGFIIGTWIKRGGKVENE
CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEHHCCCCCCHH
VSLERARKLVELVKNLRESLF
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFEKKLLIGMVHLKPLPGSYLYDGDFDSLIERAIADARTIEEAGFDAIMVENFGDVPFP
CCCHHHHHHHHEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
KYVDKTTVASLAVVARAIREEVSIPLGINVLRNDGVAAYSIAYAVKADFIRVNVLSGVAY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHEEEEEEECCCEE
TDQGIIEGIAHELARIKKLLPSKIKIFADVHVKHAVHFGDFEDALLDTVERGLADAVVVS
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCHHHEEEC
GRATGKPVDLEKLALAKKISPVPVVVGSGTSYDNLPLLWKHADGFIIGTWIKRGGKVENE
CCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEECCCCEEEEEEHHCCCCCCHH
VSLERARKLVELVKNLRESLF
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA