| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224598
Identifier: 212224598
GI number: 212224598
Start: 1323272
End: 1324975
Strand: Reverse
Name: 212224598
Synonym: TON_1447
Alternate gene names: NA
Gene position: 1324975-1323272 (Counterclockwise)
Preceding gene: 212224599
Following gene: 212224597
Centisome position: 71.71
GC content: 57.92
Gene sequence:
>1704_bases ATGAGAAAATCCGGCATCTTCGTTGCATTTTTCCTTGTTGTGGGCCTTTTCCTGCCCCTTACAAGTCCCTCCAGCGCGTG GGAGGTTGTTTACGGCGTCCAGCGCGATAAAACGATGTTCGACAGCGTCTACAACCCCATGGCATTCGTTCCGGGGAACG CGGGGGACTACTACCTCCTCGGAAGCCACGGGGCCGGATTAGCGGTTCTGATACACCTCTCGCCGATGGGGGAGGTACTC TGGGTCAAGAATCTCAGCCTCAGCCAGGAACTTCCCCTCAACCTCCCCTACGGGCAGTATCAGGTTGTATCGGACATCGC CGTAGGAAATGATGGCATCTATGTTGTCTTAAGAACGAACGGCGTCCTCAACGTCTCGGCACCGGATGACTGGATCAAGG GGGACCCGCTCTTCACGCTGGTCAAGTTCGACTTCTCAGGAAACCCGGTCTGGGCCAAGGCCTTCAAGAACTCAAAAGGT GGTTATTCGGGCATCAGGGTTCAGCCCACGGGCGATGGGGCCATTGTTGTGGCCCCCGTCTACGCGCACATGCATCATAA AAACCCGGACGATCCATATGATTGGGAAGGCATAGCCTCGGCCCTCGACATAGGGGCGATAAAGTTCGACTCCTCCGGAA ACCTGGAGTGGATCCACATCTACGGCAGGGAGAGCATCCACGAGTACGTGAACGCAGTGGGCTTCGACGGGAGTGAAGTT GCCATAGCATTCTCTTCCTCCCTCGGCGGTCCGGACCTCGGATTCCTGGCAATAGACCCCGAAACCGGAAAACCTGAGTG GGTCAGGGAGTACAAGCAGGCGGTAGACGGCGGTGAGCTCTGGAAGATGGGGCGCTTCAACACTCTCTCTGGTGGAAGAC CGATGCTCTACAGCGTCCCCGACGGATGGCTCTACACCAACGGCCTTCCCGGGAAGTACGACGGCGGTGCCTCAATCTGG GTAAAGCTTGACAAGAAGGGCAACATCCTCTGGAGCGGCTTCTGGAACACGACCCTCTACAATGGAGAATCCCCTGCCGG CTTTGCCCTCGCCGATGACGGGAACTACGTTTTCTTCGACCCGCTCGTTAAGATGTCCCCCTCCGGAGATGTTCTCAGAG TTTACTACGACGTCCAGCCCCACAGCTGGTATATAGCCCGCGCCAGAAACGGCTTTGCTATCTTCCTTCTTCCTGACAGG CTCCTGAAGCTGGACTCCAACATGAGCTTTGCTGGCTGTGACGTCCACCATGTCGAGAAGGGAGGCGAACTGACCGCGTG GGTTCCGAACTTCGTGGACCTGGGAAAGGACGACGTGAAGTTCGTGAAGGTCCCCCTCTACTCTGAGGCCAGCTTTGAAG GAACCTTTGAGTTCGACGACCTCCCGACGTGGGAGTGGTACAGGGTTGCCCCGGTGGATGTTTGGGTTCACGACCACCCA AGCGAGTACTTCCACGTTGAGGAAGCCTGCAACCAGACGGGTTCATCCGAGGGGGGAACTGAGGACTCTGCCGGCCCTGC CACATCGGTTCACTCGCCAGCCACCACATCTGAAGGTTCCGGCTTCACAAGCCCAAGCCCATCCAGCGGCTCCAGCAGCG AGGGAACAGGCACTGACGGGGGAGTTTCGGTAGACGTGACCTGCGGGCCAGGGATAATGGCCCTGCTCGCGCTGCTGGTG ATTGCAATAACTCGGAGGAGGTGA
Upstream 100 bases:
>100_bases CGGCGACCTACTGAAGGCCTCTCCGGGGAGCTCTCGGCAGAGGAGTTCGCGAACTCGATAAGCGTTGTTAAAATCAGAAA ACCATGAGGGAGTGTGGAAA
Downstream 100 bases:
>100_bases TGATATGGGACTGATCAAAAAGCTGATCGTTGGCTTCTTCCTGCTCATAGTCATAGGCATAGTCGCGGTCTTCGGCATGC AGTACTACTACCTCAACGCC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 567; Mature: 567
Protein sequence:
>567_residues MRKSGIFVAFFLVVGLFLPLTSPSSAWEVVYGVQRDKTMFDSVYNPMAFVPGNAGDYYLLGSHGAGLAVLIHLSPMGEVL WVKNLSLSQELPLNLPYGQYQVVSDIAVGNDGIYVVLRTNGVLNVSAPDDWIKGDPLFTLVKFDFSGNPVWAKAFKNSKG GYSGIRVQPTGDGAIVVAPVYAHMHHKNPDDPYDWEGIASALDIGAIKFDSSGNLEWIHIYGRESIHEYVNAVGFDGSEV AIAFSSSLGGPDLGFLAIDPETGKPEWVREYKQAVDGGELWKMGRFNTLSGGRPMLYSVPDGWLYTNGLPGKYDGGASIW VKLDKKGNILWSGFWNTTLYNGESPAGFALADDGNYVFFDPLVKMSPSGDVLRVYYDVQPHSWYIARARNGFAIFLLPDR LLKLDSNMSFAGCDVHHVEKGGELTAWVPNFVDLGKDDVKFVKVPLYSEASFEGTFEFDDLPTWEWYRVAPVDVWVHDHP SEYFHVEEACNQTGSSEGGTEDSAGPATSVHSPATTSEGSGFTSPSPSSGSSSEGTGTDGGVSVDVTCGPGIMALLALLV IAITRRR
Sequences:
>Translated_567_residues MRKSGIFVAFFLVVGLFLPLTSPSSAWEVVYGVQRDKTMFDSVYNPMAFVPGNAGDYYLLGSHGAGLAVLIHLSPMGEVL WVKNLSLSQELPLNLPYGQYQVVSDIAVGNDGIYVVLRTNGVLNVSAPDDWIKGDPLFTLVKFDFSGNPVWAKAFKNSKG GYSGIRVQPTGDGAIVVAPVYAHMHHKNPDDPYDWEGIASALDIGAIKFDSSGNLEWIHIYGRESIHEYVNAVGFDGSEV AIAFSSSLGGPDLGFLAIDPETGKPEWVREYKQAVDGGELWKMGRFNTLSGGRPMLYSVPDGWLYTNGLPGKYDGGASIW VKLDKKGNILWSGFWNTTLYNGESPAGFALADDGNYVFFDPLVKMSPSGDVLRVYYDVQPHSWYIARARNGFAIFLLPDR LLKLDSNMSFAGCDVHHVEKGGELTAWVPNFVDLGKDDVKFVKVPLYSEASFEGTFEFDDLPTWEWYRVAPVDVWVHDHP SEYFHVEEACNQTGSSEGGTEDSAGPATSVHSPATTSEGSGFTSPSPSSGSSSEGTGTDGGVSVDVTCGPGIMALLALLV IAITRRR >Mature_567_residues MRKSGIFVAFFLVVGLFLPLTSPSSAWEVVYGVQRDKTMFDSVYNPMAFVPGNAGDYYLLGSHGAGLAVLIHLSPMGEVL WVKNLSLSQELPLNLPYGQYQVVSDIAVGNDGIYVVLRTNGVLNVSAPDDWIKGDPLFTLVKFDFSGNPVWAKAFKNSKG GYSGIRVQPTGDGAIVVAPVYAHMHHKNPDDPYDWEGIASALDIGAIKFDSSGNLEWIHIYGRESIHEYVNAVGFDGSEV AIAFSSSLGGPDLGFLAIDPETGKPEWVREYKQAVDGGELWKMGRFNTLSGGRPMLYSVPDGWLYTNGLPGKYDGGASIW VKLDKKGNILWSGFWNTTLYNGESPAGFALADDGNYVFFDPLVKMSPSGDVLRVYYDVQPHSWYIARARNGFAIFLLPDR LLKLDSNMSFAGCDVHHVEKGGELTAWVPNFVDLGKDDVKFVKVPLYSEASFEGTFEFDDLPTWEWYRVAPVDVWVHDHP SEYFHVEEACNQTGSSEGGTEDSAGPATSVHSPATTSEGSGFTSPSPSSGSSSEGTGTDGGVSVDVTCGPGIMALLALLV IAITRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61587; Mature: 61587
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKSGIFVAFFLVVGLFLPLTSPSSAWEVVYGVQRDKTMFDSVYNPMAFVPGNAGDYYLL CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEEE GSHGAGLAVLIHLSPMGEVLWVKNLSLSQELPLNLPYGQYQVVSDIAVGNDGIYVVLRTN ECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECC GVLNVSAPDDWIKGDPLFTLVKFDFSGNPVWAKAFKNSKGGYSGIRVQPTGDGAIVVAPV CEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEEE YAHMHHKNPDDPYDWEGIASALDIGAIKFDSSGNLEWIHIYGRESIHEYVNAVGFDGSEV EEEHHCCCCCCCCCHHHHHHHHEEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCCEE AIAFSSSLGGPDLGFLAIDPETGKPEWVREYKQAVDGGELWKMGRFNTLSGGRPMLYSVP EEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECC DGWLYTNGLPGKYDGGASIWVKLDKKGNILWSGFWNTTLYNGESPAGFALADDGNYVFFD CCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEECCCCCCCEEEECCCCEEEEC PLVKMSPSGDVLRVYYDVQPHSWYIARARNGFAIFLLPDRLLKLDSNMSFAGCDVHHVEK CEEEECCCCCEEEEEEECCCCEEEEEEECCCEEEEEECCHHEEECCCCCEECCCEEEECC GGELTAWVPNFVDLGKDDVKFVKVPLYSEASFEGTFEFDDLPTWEWYRVAPVDVWVHDHP CCCEEEECCCHHHCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEEEECCC SEYFHVEEACNQTGSSEGGTEDSAGPATSVHSPATTSEGSGFTSPSPSSGSSSEGTGTDG CCEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVSVDVTCGPGIMALLALLVIAITRRR CEEEEEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKSGIFVAFFLVVGLFLPLTSPSSAWEVVYGVQRDKTMFDSVYNPMAFVPGNAGDYYLL CCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEECCCCCCEEEE GSHGAGLAVLIHLSPMGEVLWVKNLSLSQELPLNLPYGQYQVVSDIAVGNDGIYVVLRTN ECCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEECC GVLNVSAPDDWIKGDPLFTLVKFDFSGNPVWAKAFKNSKGGYSGIRVQPTGDGAIVVAPV CEEECCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEEE YAHMHHKNPDDPYDWEGIASALDIGAIKFDSSGNLEWIHIYGRESIHEYVNAVGFDGSEV EEEHHCCCCCCCCCHHHHHHHHEEEEEEECCCCCEEEEEEECCHHHHHHHHHCCCCCCEE AIAFSSSLGGPDLGFLAIDPETGKPEWVREYKQAVDGGELWKMGRFNTLSGGRPMLYSVP EEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEECC DGWLYTNGLPGKYDGGASIWVKLDKKGNILWSGFWNTTLYNGESPAGFALADDGNYVFFD CCEEEECCCCCCCCCCEEEEEEECCCCCEEEEEECCCEEECCCCCCCEEEECCCCEEEEC PLVKMSPSGDVLRVYYDVQPHSWYIARARNGFAIFLLPDRLLKLDSNMSFAGCDVHHVEK CEEEECCCCCEEEEEEECCCCEEEEEEECCCEEEEEECCHHEEECCCCCEECCCEEEECC GGELTAWVPNFVDLGKDDVKFVKVPLYSEASFEGTFEFDDLPTWEWYRVAPVDVWVHDHP CCCEEEECCCHHHCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCEEEEEEEEEEEECCC SEYFHVEEACNQTGSSEGGTEDSAGPATSVHSPATTSEGSGFTSPSPSSGSSSEGTGTDG CCEEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GVSVDVTCGPGIMALLALLVIAITRRR CEEEEEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA