| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is aegA [H]
Identifier: 212224487
GI number: 212224487
Start: 1208759
End: 1210210
Strand: Reverse
Name: aegA [H]
Synonym: TON_1336
Alternate gene names: 212224487
Gene position: 1210210-1208759 (Counterclockwise)
Preceding gene: 212224488
Following gene: 212224484
Centisome position: 65.5
GC content: 55.44
Gene sequence:
>1452_bases ATGGCCCTTAAGAGAAAGCTCATTAAGGAACGCGTTCCGACTCCCGAGATCCCGGTTGGGGAAAGGATAAATTCATTCAA AGAAGTCAATCTTGGTTATACCTTCGAGCTGGCCGTTAAGGAGGCCGAGCGCTGCCTTCAGTGTCCATACAACTATGCAC CCTGTATCAAGGGATGTCCTGTTCACATCGACATTCCAGGATTCATAAGCAAGCTCGTTGAGTACCGTGACAACCCTGAC AAGGCCGTTAAGGAGGCTCTCAACGTCATCTGGGCCTGCAACTCTCTGCCGGCAACCACCGGTCGTGTCTGCCCTCAGGA GGATCAGTGTGAGATGAACTGTGTTATGGGCAAAGTTGGTGACAAGATAAACATCGGCAAGCTCGAGAGGTTTGTCGCCG ACTACGCGAGGGAGCACGGCATAGACGAGGAGCTTCTCTTTGAGATAGTACCCAAGATAGAGAAGAAGGGCCAGAAAGTT GCAATCATCGGAGCCGGTCCGGCTGGACTTACCGCCGCTGGCGAGCTGGCCAAGCTCGGCTACGACGTCACAATCTACGA GGCTCTCCACGAGGCCGGTGGAGTCCTTATGTACGGCATTCCAGAGTTCAGGCTGCCTAAGGAGATAGTCCAGAGCGAGA TTGAAAAGCTCAAGAAGCTCGGTGTGAAAATCCTGACTGACCACATCGTCGGAAAGACCGTCACCATGGAAGAGTTGCTC GAGGAGTACGACGCCGTCTTTATTGGCTCCGGAGCTGGAACGCCGAGGTTCATCAACGCTCCAGGAATTAACCTCAACGG CATCTACTCGGCCAACGAGTTCCTGACCAGGGTCAACCTCATGAAGGCCTATAAGTTCCCGGAGTACGACACGCCCGTCA AAGTCGGCAAGCGTGTTATAGTCATTGGTGCCGGAAACACCGGAATGGACGCAGCGAGGAGCGCGAGGCGCTTCGGCGCC GAGGTCATCATCGCCTACAGGCGCGGTCCCGAGGATGTAAGTGCCCGTGTCGAGGAGGTTGAGCACGCCAAGGAGGAGGG CATCAAGTTCGAGTTCTTCCTCAACCCGGTCGAGTTCATAGGCGACGGCAAGGGCAACCTCAAGGCGGTTAAGTTCGAGA AGATGAGGCCGCTCGATAAGCGCGATAGCAGGGGCAAGAGGAAGATAGTCGGCACCGGCGAGTACGTCACCATCGAGACC GACACGGTCATCATAGCCATAGGCAAGCATCCAAACAGGCTCATCGTCAACACGCCCGGCCTGAAGGTCGAGCGCGGTAA GATAGTCGTCGACGAGAACCTCATGACGAGCATTCCAGGGGTCTTCGCCGGTGGCGATGCGATAAGGGGCGAAGCAACGG TTATCCTTGCCATGGGTGACGGAAGGAGGGCTGCCAAAGCCATCCATGAGTATCTGACGAAGAAGAGGGAAGAACAGAGA GAGAATGCCTGA
Upstream 100 bases:
>100_bases TCGCGTGGGACGAGCTCATAGCGAGGAGCGGTTACTATACTGACCTGGAGGCGAAGGCCATGCAGGAGTACATGAAAGCC CTCCAGGGAGGTGGGCAGTG
Downstream 100 bases:
>100_bases GCTCTTTTCTGTTCTTCTCAACTTTCCTCTTACGACTACTATCTCATGCTTCTGCCATAGAAGTTGCGGCACCTTTATCA ATTCCCTGGCGAATGAAACT
Product: putative oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 483; Mature: 482
Protein sequence:
>483_residues MALKRKLIKERVPTPEIPVGERINSFKEVNLGYTFELAVKEAERCLQCPYNYAPCIKGCPVHIDIPGFISKLVEYRDNPD KAVKEALNVIWACNSLPATTGRVCPQEDQCEMNCVMGKVGDKINIGKLERFVADYAREHGIDEELLFEIVPKIEKKGQKV AIIGAGPAGLTAAGELAKLGYDVTIYEALHEAGGVLMYGIPEFRLPKEIVQSEIEKLKKLGVKILTDHIVGKTVTMEELL EEYDAVFIGSGAGTPRFINAPGINLNGIYSANEFLTRVNLMKAYKFPEYDTPVKVGKRVIVIGAGNTGMDAARSARRFGA EVIIAYRRGPEDVSARVEEVEHAKEEGIKFEFFLNPVEFIGDGKGNLKAVKFEKMRPLDKRDSRGKRKIVGTGEYVTIET DTVIIAIGKHPNRLIVNTPGLKVERGKIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRRAAKAIHEYLTKKREEQR ENA
Sequences:
>Translated_483_residues MALKRKLIKERVPTPEIPVGERINSFKEVNLGYTFELAVKEAERCLQCPYNYAPCIKGCPVHIDIPGFISKLVEYRDNPD KAVKEALNVIWACNSLPATTGRVCPQEDQCEMNCVMGKVGDKINIGKLERFVADYAREHGIDEELLFEIVPKIEKKGQKV AIIGAGPAGLTAAGELAKLGYDVTIYEALHEAGGVLMYGIPEFRLPKEIVQSEIEKLKKLGVKILTDHIVGKTVTMEELL EEYDAVFIGSGAGTPRFINAPGINLNGIYSANEFLTRVNLMKAYKFPEYDTPVKVGKRVIVIGAGNTGMDAARSARRFGA EVIIAYRRGPEDVSARVEEVEHAKEEGIKFEFFLNPVEFIGDGKGNLKAVKFEKMRPLDKRDSRGKRKIVGTGEYVTIET DTVIIAIGKHPNRLIVNTPGLKVERGKIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRRAAKAIHEYLTKKREEQR ENA >Mature_482_residues ALKRKLIKERVPTPEIPVGERINSFKEVNLGYTFELAVKEAERCLQCPYNYAPCIKGCPVHIDIPGFISKLVEYRDNPDK AVKEALNVIWACNSLPATTGRVCPQEDQCEMNCVMGKVGDKINIGKLERFVADYAREHGIDEELLFEIVPKIEKKGQKVA IIGAGPAGLTAAGELAKLGYDVTIYEALHEAGGVLMYGIPEFRLPKEIVQSEIEKLKKLGVKILTDHIVGKTVTMEELLE EYDAVFIGSGAGTPRFINAPGINLNGIYSANEFLTRVNLMKAYKFPEYDTPVKVGKRVIVIGAGNTGMDAARSARRFGAE VIIAYRRGPEDVSARVEEVEHAKEEGIKFEFFLNPVEFIGDGKGNLKAVKFEKMRPLDKRDSRGKRKIVGTGEYVTIETD TVIIAIGKHPNRLIVNTPGLKVERGKIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRRAAKAIHEYLTKKREEQRE NA
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=463, Percent_Identity=34.341252699784, Blast_Score=196, Evalue=3e-50, Organism=Escherichia coli, GI1788811, Length=464, Percent_Identity=36.4224137931034, Blast_Score=256, Evalue=2e-69, Organism=Escherichia coli, GI1789606, Length=475, Percent_Identity=34.1052631578947, Blast_Score=244, Evalue=7e-66, Organism=Escherichia coli, GI87082180, Length=469, Percent_Identity=32.8358208955224, Blast_Score=223, Evalue=3e-59, Organism=Escherichia coli, GI1788468, Length=454, Percent_Identity=34.3612334801762, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI1789243, Length=420, Percent_Identity=35.4761904761905, Blast_Score=198, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17570289, Length=483, Percent_Identity=29.8136645962733, Blast_Score=190, Evalue=1e-48, Organism=Caenorhabditis elegans, GI71984108, Length=471, Percent_Identity=33.9702760084926, Blast_Score=171, Evalue=8e-43, Organism=Caenorhabditis elegans, GI17543860, Length=208, Percent_Identity=26.4423076923077, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320030, Length=474, Percent_Identity=30.379746835443, Blast_Score=186, Evalue=6e-48, Organism=Drosophila melanogaster, GI24665547, Length=496, Percent_Identity=31.25, Blast_Score=195, Evalue=7e-50, Organism=Drosophila melanogaster, GI24665543, Length=496, Percent_Identity=31.25, Blast_Score=195, Evalue=7e-50, Organism=Drosophila melanogaster, GI28574881, Length=496, Percent_Identity=31.25, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI24665539, Length=496, Percent_Identity=31.25, Blast_Score=194, Evalue=9e-50, Organism=Drosophila melanogaster, GI24640763, Length=477, Percent_Identity=32.4947589098532, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI18858217, Length=477, Percent_Identity=32.4947589098532, Blast_Score=179, Evalue=3e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 53316; Mature: 53184
Theoretical pI: Translated: 7.98; Mature: 7.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKRKLIKERVPTPEIPVGERINSFKEVNLGYTFELAVKEAERCLQCPYNYAPCIKGCP CCHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCE VHIDIPGFISKLVEYRDNPDKAVKEALNVIWACNSLPATTGRVCPQEDQCEMNCVMGKVG EEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCC DKINIGKLERFVADYAREHGIDEELLFEIVPKIEKKGQKVAIIGAGPAGLTAAGELAKLG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCC YDVTIYEALHEAGGVLMYGIPEFRLPKEIVQSEIEKLKKLGVKILTDHIVGKTVTMEELL CCCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHH EEYDAVFIGSGAGTPRFINAPGINLNGIYSANEFLTRVNLMKAYKFPEYDTPVKVGKRVI HHHCEEEEECCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCHHHCCEEE VIGAGNTGMDAARSARRFGAEVIIAYRRGPEDVSARVEEVEHAKEEGIKFEFFLNPVEFI EEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHH GDGKGNLKAVKFEKMRPLDKRDSRGKRKIVGTGEYVTIETDTVIIAIGKHPNRLIVNTPG CCCCCCEEEEEEHHCCCCCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCEEEEECCC LKVERGKIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRRAAKAIHEYLTKKREEQR CEEECCEEEECCCHHHHCCCEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH ENA CCC >Mature Secondary Structure ALKRKLIKERVPTPEIPVGERINSFKEVNLGYTFELAVKEAERCLQCPYNYAPCIKGCP CHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCE VHIDIPGFISKLVEYRDNPDKAVKEALNVIWACNSLPATTGRVCPQEDQCEMNCVMGKVG EEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCC DKINIGKLERFVADYAREHGIDEELLFEIVPKIEKKGQKVAIIGAGPAGLTAAGELAKLG CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCC YDVTIYEALHEAGGVLMYGIPEFRLPKEIVQSEIEKLKKLGVKILTDHIVGKTVTMEELL CCCHHHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCEECHHHHH EEYDAVFIGSGAGTPRFINAPGINLNGIYSANEFLTRVNLMKAYKFPEYDTPVKVGKRVI HHHCEEEEECCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHCCCCCCCCHHHCCEEE VIGAGNTGMDAARSARRFGAEVIIAYRRGPEDVSARVEEVEHAKEEGIKFEFFLNPVEFI EEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEECHHHHH GDGKGNLKAVKFEKMRPLDKRDSRGKRKIVGTGEYVTIETDTVIIAIGKHPNRLIVNTPG CCCCCCEEEEEEHHCCCCCCCCCCCCEEEEECCCEEEEECCEEEEEECCCCCEEEEECCC LKVERGKIVVDENLMTSIPGVFAGGDAIRGEATVILAMGDGRRAAKAIHEYLTKKREEQR CEEECCEEEECCCHHHHCCCEEECCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHH ENA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]