Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224448

Identifier: 212224448

GI number: 212224448

Start: 1179126

End: 1180382

Strand: Reverse

Name: 212224448

Synonym: TON_1298

Alternate gene names: NA

Gene position: 1180382-1179126 (Counterclockwise)

Preceding gene: 212224454

Following gene: 212224447

Centisome position: 63.89

GC content: 47.41

Gene sequence:

>1257_bases
ATGAACTGGAAGGCCCCTGTGGTGTTACTCATCGGACTTTTCTTGTTAGGGGGGGTCGTGACGGCAGTCCCATTTGACAA
GCCCGAAGCAGTGCCCTTAGCCACAGTCAAAGCACTCGCACTTAGGGAACTCCACAAGTTCCCGGAATTCAACCGAGCAA
TCCCAACCAACCCAACCCCCCTCTACTTCCCCGATGGTAGATTAGTAGCTTACGAATTTAGAATTGTCAAAAATGGAAAA
ACCATCGGCTACATCATAGTATCAGCCAACAGGAATTTGCCGCCGGCAATTCTCGAAGCGGGCTTTGGGGAAAAGACCCC
AAGCGACTTGATGAAAGAACTTGCAGTGAGGAAAGGAGCGAAAAACTACCGCTTTGCCTACCTTGGAGGGCTAAGCTATG
GGTTACTAATAGGAGACAAATTAATGGACATAAAGGGGAGGGAGTACAAAAAGCCAAGCAGGTACACTCTCTCACTGGAA
GTTGAGGCCACCAAGAACCAAAAAGAGTGGAAATCAATAGAATCCATAGTACTTACAACACCGAAATACCCGATTACTCC
ACTGGCAACAATAACGTCTGAGAAGATAATCTACGGCGTTCCAGCATGGACCGATACAGATCCAGGAGGAGCATCAGATA
CAGATTCAAACCTTGGGCCAGCCCCGGATCCCTGGGGAGATAACGACGGATGCGCTCCAATCGCAGGTTCTATGGTTGTG
GGTTATTACGAGCCTCAATATCGTACTGACTGGTATCGGGAGGCCATAATAGATATCCTCCATGACCTTATGCACACTGA
TTACTATGGGAACACTGCCCCCGATGACATTGGGCCTGGTCTTGAAGCATTTTACCAAGACGCCATTCGCCGCTACTGGG
AAGGGGAACTGGCTGATCCTCCACATTGCTCATATCAAGTTTATTGGTACGAGAATCCAGATCCCTCCTGGTTGTTTGGC
AAATTGAAGTATGAGGTTGACAACAACAGACCAGGATTATTTAGAACATTTCAGGCGTATTTAGAGGAAAGTGGTAAATG
GATAACATGGCCTCATGTAATGTCCTTTACAGGATACCGAATTTACAGCAACGGGTACGAATACCTACAAGTCCACACGG
GAGCAAGAAATTATGAGGCATTAAGCGTGGACTGGATTTTGGTAGGGAACTGGCAAAACGCGGATTTATACGTAATATAC
CCAACATGCATAAGCGGGCCAGAACCATTATCCGGGGGTGATACAGTTGAACGGTAG

Upstream 100 bases:

>100_bases
ATAACTTAGTTCTAGCCAAGTTTTCACTTCTGATGATAGAAAGAGTTAAATAATCTAACGGCATATTTTGTAACGCGACC
CCCTATTCGAGGTGCAGATT

Downstream 100 bases:

>100_bases
AACTATCACAAAAACTGCTCATACTTTCCATTATTTTACTTTTTCTTGCGGTGGTGTTGTATTCCAAAATGCCCATCCGA
GAGACAGAACAGGATGAAGG

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MNWKAPVVLLIGLFLLGGVVTAVPFDKPEAVPLATVKALALRELHKFPEFNRAIPTNPTPLYFPDGRLVAYEFRIVKNGK
TIGYIIVSANRNLPPAILEAGFGEKTPSDLMKELAVRKGAKNYRFAYLGGLSYGLLIGDKLMDIKGREYKKPSRYTLSLE
VEATKNQKEWKSIESIVLTTPKYPITPLATITSEKIIYGVPAWTDTDPGGASDTDSNLGPAPDPWGDNDGCAPIAGSMVV
GYYEPQYRTDWYREAIIDILHDLMHTDYYGNTAPDDIGPGLEAFYQDAIRRYWEGELADPPHCSYQVYWYENPDPSWLFG
KLKYEVDNNRPGLFRTFQAYLEESGKWITWPHVMSFTGYRIYSNGYEYLQVHTGARNYEALSVDWILVGNWQNADLYVIY
PTCISGPEPLSGGDTVER

Sequences:

>Translated_418_residues
MNWKAPVVLLIGLFLLGGVVTAVPFDKPEAVPLATVKALALRELHKFPEFNRAIPTNPTPLYFPDGRLVAYEFRIVKNGK
TIGYIIVSANRNLPPAILEAGFGEKTPSDLMKELAVRKGAKNYRFAYLGGLSYGLLIGDKLMDIKGREYKKPSRYTLSLE
VEATKNQKEWKSIESIVLTTPKYPITPLATITSEKIIYGVPAWTDTDPGGASDTDSNLGPAPDPWGDNDGCAPIAGSMVV
GYYEPQYRTDWYREAIIDILHDLMHTDYYGNTAPDDIGPGLEAFYQDAIRRYWEGELADPPHCSYQVYWYENPDPSWLFG
KLKYEVDNNRPGLFRTFQAYLEESGKWITWPHVMSFTGYRIYSNGYEYLQVHTGARNYEALSVDWILVGNWQNADLYVIY
PTCISGPEPLSGGDTVER
>Mature_418_residues
MNWKAPVVLLIGLFLLGGVVTAVPFDKPEAVPLATVKALALRELHKFPEFNRAIPTNPTPLYFPDGRLVAYEFRIVKNGK
TIGYIIVSANRNLPPAILEAGFGEKTPSDLMKELAVRKGAKNYRFAYLGGLSYGLLIGDKLMDIKGREYKKPSRYTLSLE
VEATKNQKEWKSIESIVLTTPKYPITPLATITSEKIIYGVPAWTDTDPGGASDTDSNLGPAPDPWGDNDGCAPIAGSMVV
GYYEPQYRTDWYREAIIDILHDLMHTDYYGNTAPDDIGPGLEAFYQDAIRRYWEGELADPPHCSYQVYWYENPDPSWLFG
KLKYEVDNNRPGLFRTFQAYLEESGKWITWPHVMSFTGYRIYSNGYEYLQVHTGARNYEALSVDWILVGNWQNADLYVIY
PTCISGPEPLSGGDTVER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47089; Mature: 47089

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWKAPVVLLIGLFLLGGVVTAVPFDKPEAVPLATVKALALRELHKFPEFNRAIPTNPTP
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
LYFPDGRLVAYEFRIVKNGKTIGYIIVSANRNLPPAILEAGFGEKTPSDLMKELAVRKGA
EECCCCCEEEEEEEEEECCCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCC
KNYRFAYLGGLSYGLLIGDKLMDIKGREYKKPSRYTLSLEVEATKNQKEWKSIESIVLTT
CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHEEEEEC
PKYPITPLATITSEKIIYGVPAWTDTDPGGASDTDSNLGPAPDPWGDNDGCAPIAGSMVV
CCCCCCCHHEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
GYYEPQYRTDWYREAIIDILHDLMHTDYYGNTAPDDIGPGLEAFYQDAIRRYWEGELADP
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PHCSYQVYWYENPDPSWLFGKLKYEVDNNRPGLFRTFQAYLEESGKWITWPHVMSFTGYR
CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEECHHHHCCCCEE
IYSNGYEYLQVHTGARNYEALSVDWILVGNWQNADLYVIYPTCISGPEPLSGGDTVER
EECCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNWKAPVVLLIGLFLLGGVVTAVPFDKPEAVPLATVKALALRELHKFPEFNRAIPTNPTP
CCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCE
LYFPDGRLVAYEFRIVKNGKTIGYIIVSANRNLPPAILEAGFGEKTPSDLMKELAVRKGA
EECCCCCEEEEEEEEEECCCEEEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHCCC
KNYRFAYLGGLSYGLLIGDKLMDIKGREYKKPSRYTLSLEVEATKNQKEWKSIESIVLTT
CCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHEEEEEC
PKYPITPLATITSEKIIYGVPAWTDTDPGGASDTDSNLGPAPDPWGDNDGCAPIAGSMVV
CCCCCCCHHEECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
GYYEPQYRTDWYREAIIDILHDLMHTDYYGNTAPDDIGPGLEAFYQDAIRRYWEGELADP
EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PHCSYQVYWYENPDPSWLFGKLKYEVDNNRPGLFRTFQAYLEESGKWITWPHVMSFTGYR
CCCCEEEEEEECCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCEEECHHHHCCCCEE
IYSNGYEYLQVHTGARNYEALSVDWILVGNWQNADLYVIYPTCISGPEPLSGGDTVER
EECCCEEEEEEECCCCCCEEEEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA