| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224374
Identifier: 212224374
GI number: 212224374
Start: 1118357
End: 1119004
Strand: Reverse
Name: 212224374
Synonym: TON_1225
Alternate gene names: NA
Gene position: 1119004-1118357 (Counterclockwise)
Preceding gene: 212224376
Following gene: 212224373
Centisome position: 60.57
GC content: 54.48
Gene sequence:
>648_bases ATGGACTACGAGCTCCGCGTGAGGCCGGTAAAGTACGCCCGGCTTGAGGTCAGGCCGGATGGAAAGGTAGTTGTTACGGC CCCGTTCGGCTTTGACGTTGATTCCTTTATTGAGAATCACAGGAAGTGGCTTGAGAAAAAACTTGCTGGGGTTGAAAAAG CCCGGAAAGAGGCGGAAAAGGGTTTTCCCCTCGATGGCAGGTTCTACCACGTCATCCATGGTAGAAAGCCGAAGATACAC GACCGGTTCGGGACGGTCGTCCTCCCTCCGATGCCCGAACAGATGATCTCGCTCCTCAGAGAGCGCCTCAGGAGGGAACT CCACGAGCTTATCGGTGAGTACTCCCGGAAGATGGGCGTCGAACCCGGAAAGATCTACGTGAGGCTCGGCAGGAGCAAGT GGGGAAGCTGCTCTTCGAGGAAAAACCTGAGCTTCAACCTCCGTCTCATAGTCGTTCCAGAAAATCTGAAGCGATACGTT GTTGTTCACGAGCTTGCTCACCTGAGGTATCTCAACCACTCAAAGGCCTTCTGGGAACTCGTCGGAAGGTTTTATCCTGA CTACAAAACCGCCAGAAGGGAGCTCAAACACTGGTGGCGCGTGGTTGAGCTGAACGAATACTGGCGCTGGCTGGAGGGAA GGGAATGA
Upstream 100 bases:
>100_bases TCCTGGAATCTTCGAGCGGGTGTAGATGCTCTTGGCTTTTCTCTTGAGAACCTCAACTTTCATAAGCTCAGCTTCTTACT TTTCCTTAAAGGTGAGCGGG
Downstream 100 bases:
>100_bases AAAAGGGAAATATTCTCAAGCTTCTCGCATTGATGGCGGACGAACTTATTGTGGCCGTTCTGCTCTTAATCGTCCTCCCC GCAATGGGCATAAACGTTCC
Product: putative zinc-dependent protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MDYELRVRPVKYARLEVRPDGKVVVTAPFGFDVDSFIENHRKWLEKKLAGVEKARKEAEKGFPLDGRFYHVIHGRKPKIH DRFGTVVLPPMPEQMISLLRERLRRELHELIGEYSRKMGVEPGKIYVRLGRSKWGSCSSRKNLSFNLRLIVVPENLKRYV VVHELAHLRYLNHSKAFWELVGRFYPDYKTARRELKHWWRVVELNEYWRWLEGRE
Sequences:
>Translated_215_residues MDYELRVRPVKYARLEVRPDGKVVVTAPFGFDVDSFIENHRKWLEKKLAGVEKARKEAEKGFPLDGRFYHVIHGRKPKIH DRFGTVVLPPMPEQMISLLRERLRRELHELIGEYSRKMGVEPGKIYVRLGRSKWGSCSSRKNLSFNLRLIVVPENLKRYV VVHELAHLRYLNHSKAFWELVGRFYPDYKTARRELKHWWRVVELNEYWRWLEGRE >Mature_215_residues MDYELRVRPVKYARLEVRPDGKVVVTAPFGFDVDSFIENHRKWLEKKLAGVEKARKEAEKGFPLDGRFYHVIHGRKPKIH DRFGTVVLPPMPEQMISLLRERLRRELHELIGEYSRKMGVEPGKIYVRLGRSKWGSCSSRKNLSFNLRLIVVPENLKRYV VVHELAHLRYLNHSKAFWELVGRFYPDYKTARRELKHWWRVVELNEYWRWLEGRE
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25837; Mature: 25837
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYELRVRPVKYARLEVRPDGKVVVTAPFGFDVDSFIENHRKWLEKKLAGVEKARKEAEK CCCCEEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFPLDGRFYHVIHGRKPKIHDRFGTVVLPPMPEQMISLLRERLRRELHELIGEYSRKMGV CCCCCCEEEEEEECCCCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPGKIYVRLGRSKWGSCSSRKNLSFNLRLIVVPENLKRYVVVHELAHLRYLNHSKAFWEL CCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHH VGRFYPDYKTARRELKHWWRVVELNEYWRWLEGRE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDYELRVRPVKYARLEVRPDGKVVVTAPFGFDVDSFIENHRKWLEKKLAGVEKARKEAEK CCCCEEEEEEEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GFPLDGRFYHVIHGRKPKIHDRFGTVVLPPMPEQMISLLRERLRRELHELIGEYSRKMGV CCCCCCEEEEEEECCCCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC EPGKIYVRLGRSKWGSCSSRKNLSFNLRLIVVPENLKRYVVVHELAHLRYLNHSKAFWEL CCCEEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHHH VGRFYPDYKTARRELKHWWRVVELNEYWRWLEGRE HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA