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The map label for this gene is yjbQ [C]

Identifier: 212224367

GI number: 212224367

Start: 1113903

End: 1114307

Strand: Reverse

Name: yjbQ [C]

Synonym: TON_1218

Alternate gene names: 212224367

Gene position: 1114307-1113903 (Counterclockwise)

Preceding gene: 212224368

Following gene: 212224365

Centisome position: 60.31

GC content: 51.11

Gene sequence:

>405_bases
ATGCTCTTCGAGATTGAGGTGCCCACGAAGGAGAGATTTCAGATAATAGACATAACGAAGGAGATTCAGCACCTCGTCTG
GAGGAGTGACGTCACGAGCGGCATCGTCGTTGTTTTTACCAAGCACACGACGACGGGCCTCTTAATAAATGAGAATGAGG
AGAGGCTCCTCCAGGATATAAAGGCCAAGATGAAGGAACTTGTTCCCAAAGGGGCCGGCTACGGTCATGACTCAATAGAC
AGCAACGCCCACTCCCATATAAGGGCGAGCCTCTTCCTCAGCCCAGAGATCGTCGTGCCTGTAGACGAGGGAGAACTTCT
GCTTGGAACTTGGCAGAGGATACTCTTCGTCGAACTCGATGGGCCGAGGCACAGAAAAGTTCTGGTAAAGATATGCAAGT
GCTGA

Upstream 100 bases:

>100_bases
TGAGAAGGCAGTCCTTTTAAGGGCCATAGTCTCTGGGGATATTAAAAGTCCGGAGGAAGTCCTTATTGATATCCGGAAGA
ACCTCCGCGTGGTGAAGTAA

Downstream 100 bases:

>100_bases
TCAGACGTACTGGGCGTAATAGGCTAACGCCTTCAGCAGGTCGTTGAAGCCTTCGTAGGTGACCAGCGAGAGAGGGATGG
CCTCCTGTTCAAGGCGCTTC

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MLFEIEVPTKERFQIIDITKEIQHLVWRSDVTSGIVVVFTKHTTTGLLINENEERLLQDIKAKMKELVPKGAGYGHDSID
SNAHSHIRASLFLSPEIVVPVDEGELLLGTWQRILFVELDGPRHRKVLVKICKC

Sequences:

>Translated_134_residues
MLFEIEVPTKERFQIIDITKEIQHLVWRSDVTSGIVVVFTKHTTTGLLINENEERLLQDIKAKMKELVPKGAGYGHDSID
SNAHSHIRASLFLSPEIVVPVDEGELLLGTWQRILFVELDGPRHRKVLVKICKC
>Mature_134_residues
MLFEIEVPTKERFQIIDITKEIQHLVWRSDVTSGIVVVFTKHTTTGLLINENEERLLQDIKAKMKELVPKGAGYGHDSID
SNAHSHIRASLFLSPEIVVPVDEGELLLGTWQRILFVELDGPRHRKVLVKICKC

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15268; Mature: 15268

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFEIEVPTKERFQIIDITKEIQHLVWRSDVTSGIVVVFTKHTTTGLLINENEERLLQDI
CEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHHHHHH
KAKMKELVPKGAGYGHDSIDSNAHSHIRASLFLSPEIVVPVDEGELLLGTWQRILFVELD
HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCEEEEEEEC
GPRHRKVLVKICKC
CCCHHHHHHHHHCC
>Mature Secondary Structure
MLFEIEVPTKERFQIIDITKEIQHLVWRSDVTSGIVVVFTKHTTTGLLINENEERLLQDI
CEEEEECCCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCHHHHHHHH
KAKMKELVPKGAGYGHDSIDSNAHSHIRASLFLSPEIVVPVDEGELLLGTWQRILFVELD
HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEEEECCCCEEEEECCEEEEEEEC
GPRHRKVLVKICKC
CCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]