| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212224365
Identifier: 212224365
GI number: 212224365
Start: 1112979
End: 1113293
Strand: Reverse
Name: 212224365
Synonym: TON_1216
Alternate gene names: NA
Gene position: 1113293-1112979 (Counterclockwise)
Preceding gene: 212224367
Following gene: 212224364
Centisome position: 60.26
GC content: 50.79
Gene sequence:
>315_bases ATGCCCAAGAGGATGAAACTCGGTCATCATTATTATTACATCGTTACGGTTGATGAGCTCCATGCCAGGGGTTTCAGGGG CAAGAACGTTGTCATCGAGGGTACTATTGAGGACAAGCCTTTGATTGAGTTCCTCCCCATGGAACTTCCTGGATACAGAG CCACGTTTAAAGTTTCCGGCATCAGGGTCGAGTTCTCCGGAAGCCCATGTCTGGGTAAAGGGGAGTGGGTGAGGGTTTAC GGAAGGTTCTTGGGCGACTGCATAATGGCGAGCGCGATAGAGACCGAAAAAGCCGTTTTCATCACGGAGGAGTGA
Upstream 100 bases:
>100_bases GCGTTGATTTACCGACGTTTTCGGCTCCTATAATCGCAACCTTTATCATATCCTCACCCCACAGATAGTACTCGAAGTCG GGCTATAAAGGTGATGAAGT
Downstream 100 bases:
>100_bases GCATGCTCGATCTGTTTTTTGAAGCAGGGAACCTCAAGAAGCTGCCGAGAACGGGCTGGCTTCTGAGGGGTGTTTCAAAC CCGGAGAGCATAGCTGACCA
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MPKRMKLGHHYYYIVTVDELHARGFRGKNVVIEGTIEDKPLIEFLPMELPGYRATFKVSGIRVEFSGSPCLGKGEWVRVY GRFLGDCIMASAIETEKAVFITEE
Sequences:
>Translated_104_residues MPKRMKLGHHYYYIVTVDELHARGFRGKNVVIEGTIEDKPLIEFLPMELPGYRATFKVSGIRVEFSGSPCLGKGEWVRVY GRFLGDCIMASAIETEKAVFITEE >Mature_103_residues PKRMKLGHHYYYIVTVDELHARGFRGKNVVIEGTIEDKPLIEFLPMELPGYRATFKVSGIRVEFSGSPCLGKGEWVRVYG RFLGDCIMASAIETEKAVFITEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11828; Mature: 11697
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRMKLGHHYYYIVTVDELHARGFRGKNVVIEGTIEDKPLIEFLPMELPGYRATFKVSG CCCCEECCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEE IRVEFSGSPCLGKGEWVRVYGRFLGDCIMASAIETEKAVFITEE EEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure PKRMKLGHHYYYIVTVDELHARGFRGKNVVIEGTIEDKPLIEFLPMELPGYRATFKVSG CCCEECCCEEEEEEEEEEECCCCCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEE IRVEFSGSPCLGKGEWVRVYGRFLGDCIMASAIETEKAVFITEE EEEEECCCCCCCCCCEEEEHHHHHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA