| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224306
Identifier: 212224306
GI number: 212224306
Start: 1059717
End: 1060217
Strand: Reverse
Name: 212224306
Synonym: TON_1157
Alternate gene names: NA
Gene position: 1060217-1059717 (Counterclockwise)
Preceding gene: 212224311
Following gene: 212224305
Centisome position: 57.38
GC content: 54.69
Gene sequence:
>501_bases ATGAATCGCCTCCTCGCGCTCGCCGTCGCGTTGCTCATCATTTCCGCCTCCCTCGGCTACGCATACCATCAGCAGGAAAG GGAGTTTGAGGCCACTCTGAATGGCATACTCGATGTTTCAAACATCGCGGTCTTCTGCCTGGAAGACATGAACACCATCG GGATAATGCTCGATGGCAACGTGAGCAATGATGTCCTTAGGGAAAGGCTGAGCCGGTACGCTTACTGCTCCTTGATGCTG GAAAAGGCAGCGTTCTCCTTCTATCTGCTGAATGAAGATGAGAGGTACTGGAGGCTCCATGTGGCGGCCAGTAATCTGGA GGTCTACCTCCACACGGCCATGAACAGTCCAAATCCCGATGAAGTGCTCTCGGACGACGTGAAACTCCTCGATGAAATCT CAAGAGAACTGGGTGCGATACTCGAAAACGGAGGGGTGGGTGAACTGTCCCCCGCCCGCGCGGAGAGGCTGTTCAACCTG ACGCAGAGGCTATCAAGCTGA
Upstream 100 bases:
>100_bases TCAGGTCTGGCTTCCCTTATGGGAGGTTCCATACCACCACCCGTTGCCTGATTGGAAAAACACTTTTAAGCACCTTTCGT TATTACGTTTGATGGTGTTA
Downstream 100 bases:
>100_bases GGCGAGGTTTTGGAGGTATCCTCATGGAGCGCTGGGACTTCGACGGTTGGGCCAGGAGCTACGATGAAGATGTAGAAAGG GAGGACTGGATACACAAGGA
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MNRLLALAVALLIISASLGYAYHQQEREFEATLNGILDVSNIAVFCLEDMNTIGIMLDGNVSNDVLRERLSRYAYCSLML EKAAFSFYLLNEDERYWRLHVAASNLEVYLHTAMNSPNPDEVLSDDVKLLDEISRELGAILENGGVGELSPARAERLFNL TQRLSS
Sequences:
>Translated_166_residues MNRLLALAVALLIISASLGYAYHQQEREFEATLNGILDVSNIAVFCLEDMNTIGIMLDGNVSNDVLRERLSRYAYCSLML EKAAFSFYLLNEDERYWRLHVAASNLEVYLHTAMNSPNPDEVLSDDVKLLDEISRELGAILENGGVGELSPARAERLFNL TQRLSS >Mature_166_residues MNRLLALAVALLIISASLGYAYHQQEREFEATLNGILDVSNIAVFCLEDMNTIGIMLDGNVSNDVLRERLSRYAYCSLML EKAAFSFYLLNEDERYWRLHVAASNLEVYLHTAMNSPNPDEVLSDDVKLLDEISRELGAILENGGVGELSPARAERLFNL TQRLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18630; Mature: 18630
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLLALAVALLIISASLGYAYHQQEREFEATLNGILDVSNIAVFCLEDMNTIGIMLDGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECC VSNDVLRERLSRYAYCSLMLEKAAFSFYLLNEDERYWRLHVAASNLEVYLHTAMNSPNPD CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCEEEEEEECCCCCCHH EVLSDDVKLLDEISRELGAILENGGVGELSPARAERLFNLTQRLSS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRLLALAVALLIISASLGYAYHQQEREFEATLNGILDVSNIAVFCLEDMNTIGIMLDGN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEECC VSNDVLRERLSRYAYCSLMLEKAAFSFYLLNEDERYWRLHVAASNLEVYLHTAMNSPNPD CCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEEEECCEEEEEEECCCCCCHH EVLSDDVKLLDEISRELGAILENGGVGELSPARAERLFNLTQRLSS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA