Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212224274

Identifier: 212224274

GI number: 212224274

Start: 1036865

End: 1037326

Strand: Reverse

Name: 212224274

Synonym: TON_1125

Alternate gene names: NA

Gene position: 1037326-1036865 (Counterclockwise)

Preceding gene: 212224276

Following gene: 212224273

Centisome position: 56.14

GC content: 49.78

Gene sequence:

>462_bases
ATGAAGTTCATCGCCGACATGATGCTTGGTCGTTTGGCCCGCTGGTTGAGGCTCTACGGCTACGATACACTCTATGGAAT
CGAGGATGACAATGAGATACTCAGGATTGCCCTAGAGGAAGGGCGAATAATACTCACAAGAGATTCCGGTTTGGCCAGAG
TGGCGAAAAGGCTCGGTGCAGAAGTGATTCTTATCCACTCAAACTCACTTGAGGAGCAGGTTAAGGAACTCAAGGAGCAT
GGACTGGAGTTCAAAGATCTCTTCCCCACCAACGCGAGATGTCCGAAGTGCAACGGGCTGATAAGGCCGATTCGAAAGGG
GGAAATCAGAGACAAAGTTCCATCGAGCGTTTACGCAAATTACGACGAGTTCTATATCTGCGAGAGCTGTGGTCAGATAT
ACTGGCCGGGGAGGCAGTGGAGGGAGATGCTAAAAATCGACGAAAGGCTGAGGAGGATTTAA

Upstream 100 bases:

>100_bases
CCTCGCTCCCGCCGGTGCCGATAAAGTAAACTATCATCCTGCCACCTATTTTACGGTCGTAAAATAGTCCCCTTATAAGG
ATTGCCACCAACTCTAATCC

Downstream 100 bases:

>100_bases
AAACTTCTGCCCCAACTCGGTTTGGTGAGCCAATGGAGTGGGAAGAGTGGGAGCCTTTCTACCTACGCATAGTCCGTGAG
ATGGGTTATTCCATTGAGAA

Product: protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKFIADMMLGRLARWLRLYGYDTLYGIEDDNEILRIALEEGRIILTRDSGLARVAKRLGAEVILIHSNSLEEQVKELKEH
GLEFKDLFPTNARCPKCNGLIRPIRKGEIRDKVPSSVYANYDEFYICESCGQIYWPGRQWREMLKIDERLRRI

Sequences:

>Translated_153_residues
MKFIADMMLGRLARWLRLYGYDTLYGIEDDNEILRIALEEGRIILTRDSGLARVAKRLGAEVILIHSNSLEEQVKELKEH
GLEFKDLFPTNARCPKCNGLIRPIRKGEIRDKVPSSVYANYDEFYICESCGQIYWPGRQWREMLKIDERLRRI
>Mature_153_residues
MKFIADMMLGRLARWLRLYGYDTLYGIEDDNEILRIALEEGRIILTRDSGLARVAKRLGAEVILIHSNSLEEQVKELKEH
GLEFKDLFPTNARCPKCNGLIRPIRKGEIRDKVPSSVYANYDEFYICESCGQIYWPGRQWREMLKIDERLRRI

Specific function: Unknown

COG id: COG1656

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17993; Mature: 17993

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIADMMLGRLARWLRLYGYDTLYGIEDDNEILRIALEEGRIILTRDSGLARVAKRLGA
CHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCEEEEECCCHHHHHHHCCC
EVILIHSNSLEEQVKELKEHGLEFKDLFPTNARCPKCNGLIRPIRKGEIRDKVPSSVYAN
EEEEEECCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHCCCHHHCCCHHHHCC
YDEFYICESCGQIYWPGRQWREMLKIDERLRRI
CCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFIADMMLGRLARWLRLYGYDTLYGIEDDNEILRIALEEGRIILTRDSGLARVAKRLGA
CHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEEECCCCEEEEECCCHHHHHHHCCC
EVILIHSNSLEEQVKELKEHGLEFKDLFPTNARCPKCNGLIRPIRKGEIRDKVPSSVYAN
EEEEEECCCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCHHCCCHHHCCCHHHHCC
YDEFYICESCGQIYWPGRQWREMLKIDERLRRI
CCCEEEEHHCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA