| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224229
Identifier: 212224229
GI number: 212224229
Start: 999396
End: 1001204
Strand: Reverse
Name: 212224229
Synonym: TON_1080
Alternate gene names: NA
Gene position: 1001204-999396 (Counterclockwise)
Preceding gene: 212224237
Following gene: 212224228
Centisome position: 54.19
GC content: 53.18
Gene sequence:
>1809_bases ATGAGAGTGTTCGTTGCTGATACGAGTGTTATAGTAGATGGCCGCCTTACGCAGTTCCTATCAACGCTTGAAGACAAAGT TAAGGTTGTTATCCCTGAGGCAGTCATTGCTGAGATAGAGCATCAGGCCAACGAGGGAAAGGCTATCGGTCATGTGGGAC TTGAGGAGCTCAAAAAGCTCCGTGAGATGTCCGACAGGGGGAAGATACTCCTCGAGTTCTACGGCGAGCGGCCCGAGCTC TGGCAGATAAGTAGAGCGAAGGCTGGAGAAATAGACCACATGGTTAGGGAGGTTGCCCAGACGCTGAGCGCCACGCTCAT AACTGGTGACCAGGTGCAGAGGGACATAGCCATCGCCAAGGGTATAGACGTGATTTACCTGACGGCCAAGAAAGAAGTCA GGCACCGCTTGGAGGACTTCTTTGACGAGACGACGATGAGTGTTCACCTGAAAGCTGGCTTAAGGCCCATGGCAAAGAAG GGAAGACCGGGAGAGTGGAAGCTCGTTCCCGTTCGTGACGAGATTCTGACCGATGAAGAGCTTGAAGAGATTGCCGATGA CATAGTCGAGCGCGCGAGACGTGACCCAGAATCCTTTATAGAACTCGACGAGCCTGGAGCGACCGTCGTCCAGCTCAGGA ACTACCGTATAGTCATAGCCAAGCCGCCCTTTGCAGACAGGATTGAGATAACTGCCGTTAGACCAGTCACGAAACTAAGT ATAGAAGACTACGATCTGAGCGAGAAGCTCCTGGAGAGGCTCGTGGATAAGGCGGAGGGAATACTCATCGCAGGTGCACC TGGAGAAGGAAAGACGACCTTCGCACAGGCTTTGGCCGAGTGGTACGCCTCCATGGGCAAGATAGTGAAAACGATGGAGA AGCCAAGGGACCTGCAGGTGAGCGACGAGATAACCCAGTACACAGCTCTGGCCGGTAGAATGGAAAAGACGGGGGACATA CTCCTCCTCGTCAGGCCGGATTACACAATATTCGACGAGATGAGAAAGACCAGCGACTTCAAAATATACGCTGATCTGAG ACTTGCAGGCGTCGGAATGGTTGGTGTCGTGCATGCTACCAAGCCCATCGATGCGATCCAGAGGTTCATCGGAAGGGTCG AGCTGGGAATGATACCCCAGATAGTCGATACTGTGATTTTCATCAAGGCAGGAAGGATCGCCAAGGTTCTAACGCTGGAG TACCTCGTTAAGGTGCCAAGCGGCATGAAAGAAGAGGACTTGGCCAGGCCTGTCATCGAGGTTCGCGACTTTGAGACAGG CGAGCTTGAGTACGAGATATACACCTACGGCGAGGAGATAAGCGTTGTCCCGGTAAAGAAGGAGGAGAAATCACCGGCGC TGAGACTTGCAGAGAAGAGGCTCAAGCAGGAGATAAAGAAGTTCCTGCCCGATGTTTACGCTGAGGTTGAGATAGTCAGC CCGCACAAGGCGGTTATTTATGCCGACGAGTTCGACATTCCTGCAATCATAGGCAAGAAGGGCAAGCGTATCACCGAGCT TGAGAAGCGCATAGGAATAAGCATCGACGTCAAGAGCTTCGCCGAGAGGGAAGCGACAAAGCCGAAGGAGAGGATACATG TCGAGGTCGAGGAGAAAAAGAAAACGATAGTGCTCCGTGTTTCGCCGGACTATGCCAAGAGGCCGCTCAAGTTCTACGGA GGCGAGCAGTACGTCTTTACTGCAACGCCAAGCAAGAAGGGCCTCGTCAAAGTAAGCAAGAGCACGCCGATAGGCAAGGA ACTCAAGAGGCTCCTCGACGCGGGCATTCCGATATGGGCCTCGGCCTGA
Upstream 100 bases:
>100_bases TCCTATTTTCGACTAAACCTTTATGAACCTTTAGTCAGAGCATCGGTTAGGGAAGTCTTATAAACGGATGAGAGTTTCCG GGACTTCTGAGGTGAGAGAA
Downstream 100 bases:
>100_bases AAAAACTTTTTATGATTGATTTTTTATTTCTTTTAGTGGTACTAACCACGGAGGAATGTTTTATGGTATGGAGAGACAAG GTGTTCTGGGGTCTGGCTGG
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKLREMSDRGKILLEFYGERPEL WQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAKGIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKK GRPGEWKLVPVRDEILTDEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQVSDEITQYTALAGRMEKTGDI LLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLE YLVKVPSGMKEEDLARPVIEVRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKKKTIVLRVSPDYAKRPLKFYG GEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWASA
Sequences:
>Translated_602_residues MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKLREMSDRGKILLEFYGERPEL WQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAKGIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKK GRPGEWKLVPVRDEILTDEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQVSDEITQYTALAGRMEKTGDI LLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLE YLVKVPSGMKEEDLARPVIEVRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKKKTIVLRVSPDYAKRPLKFYG GEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWASA >Mature_602_residues MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKLREMSDRGKILLEFYGERPEL WQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAKGIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKK GRPGEWKLVPVRDEILTDEELEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQVSDEITQYTALAGRMEKTGDI LLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHATKPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLE YLVKVPSGMKEEDLARPVIEVRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKKKTIVLRVSPDYAKRPLKFYG GEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWASA
Specific function: Unknown
COG id: COG1855
COG function: function code R; ATPase (PilT family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR004087 - InterPro: IPR009019 - InterPro: IPR004088 - InterPro: IPR018111 - InterPro: IPR002716 - InterPro: IPR006596 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E; PF00013 KH_1; PF01850 PIN [H]
EC number: NA
Molecular weight: Translated: 67856; Mature: 67856
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKL CEEEEECCEEEECHHHHHHHHHHHHHHEEEECHHHHHHHHHCCCCCCEEECCCHHHHHHH REMSDRGKILLEFYGERPELWQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAK HHHHCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEECHHHHHHHHHHC GIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKKGRPGEWKLVPVRDEILTDEE CCCEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCEEEEECHHHHCCHHH LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS HHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEECEEEEEECCCCCCCEEEEEECCEEEEE IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQV CCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SDEITQYTALAGRMEKTGDILLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHAT HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEECC KPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLEYLVKVPSGMKEEDLARPVIE CCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCHHHHHCCHHH VRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS HCCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEEEEC PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKK CCEEEEEECCCCCCHHCCCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCHHHEEEEEECCC KTIVLRVSPDYAKRPLKFYGGEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWA CEEEEEECCHHHHCCHHHCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCEEE SA CC >Mature Secondary Structure MRVFVADTSVIVDGRLTQFLSTLEDKVKVVIPEAVIAEIEHQANEGKAIGHVGLEELKKL CEEEEECCEEEECHHHHHHHHHHHHHHEEEECHHHHHHHHHCCCCCCEEECCCHHHHHHH REMSDRGKILLEFYGERPELWQISRAKAGEIDHMVREVAQTLSATLITGDQVQRDIAIAK HHHHCCCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHEEEECHHHHHHHHHHC GIDVIYLTAKKEVRHRLEDFFDETTMSVHLKAGLRPMAKKGRPGEWKLVPVRDEILTDEE CCCEEEEECHHHHHHHHHHHHCCCEEEEEEECCCCHHHHCCCCCCEEEEECHHHHCCHHH LEEIADDIVERARRDPESFIELDEPGATVVQLRNYRIVIAKPPFADRIEITAVRPVTKLS HHHHHHHHHHHHHCCCHHHEEECCCCCEEEEEECEEEEEECCCCCCCEEEEEECCEEEEE IEDYDLSEKLLERLVDKAEGILIAGAPGEGKTTFAQALAEWYASMGKIVKTMEKPRDLQV CCCCCHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SDEITQYTALAGRMEKTGDILLLVRPDYTIFDEMRKTSDFKIYADLRLAGVGMVGVVHAT HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEECC KPIDAIQRFIGRVELGMIPQIVDTVIFIKAGRIAKVLTLEYLVKVPSGMKEEDLARPVIE CCHHHHHHHHHHHHHCCHHHHHHHHHHEECCCHHHHHHHHHHHHCCCCCCHHHHHCCHHH VRDFETGELEYEIYTYGEEISVVPVKKEEKSPALRLAEKRLKQEIKKFLPDVYAEVEIVS HCCCCCCCEEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHCEEEEEC PHKAVIYADEFDIPAIIGKKGKRITELEKRIGISIDVKSFAEREATKPKERIHVEVEEKK CCEEEEEECCCCCCHHCCCCCCHHHHHHHHCCCEEEHHHHHHHHCCCCHHHEEEEEECCC KTIVLRVSPDYAKRPLKFYGGEQYVFTATPSKKGLVKVSKSTPIGKELKRLLDAGIPIWA CEEEEEECCHHHHCCHHHCCCCEEEEEECCCCCCEEEEECCCCCHHHHHHHHHCCCCEEE SA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]