Click here to switch to the map view.

The map label for this gene is yqjC [H]

Identifier: 212224223

GI number: 212224223

Start: 991856

End: 992260

Strand: Reverse

Name: yqjC [H]

Synonym: TON_1074

Alternate gene names: 212224223

Gene position: 992260-991856 (Counterclockwise)

Preceding gene: 212224224

Following gene: 212224222

Centisome position: 53.71

GC content: 48.64

Gene sequence:

>405_bases
ATGATAAAGAAAATTGACCACGTCGGTATTGCAGTGAAGAACCTTGAAGAGGCCATAAAGATCTGGGAAGGTCTCGGCCT
CAAGGTCGAGGAGATTGAAGAAGTGCCGGATCAGAAGGTTAGAACTGCGATAATCCATGTCGGCGAGAGCAGAATCGAGC
TTCTGGAGCCAACGGCCGAGGACTCCCCAATAGCCAAGTTCATTGCCAAGCGTGGTGAAGGCATACACCACATAGCACTT
GGAGTTGATAACATAGAGGAACACCTTACAAAGCTGAAGGAAACGGGTTACAGACTGATCGACGAACAGCCTAGAATCGG
TGCAGGTGGTGCAAAAATCGCATTCATACATCCAAAGGCTGTAACGGGCGTTTTGCTCGAACTCTGTGAGAGAAATGGAG
AGTGA

Upstream 100 bases:

>100_bases
AGGAAGAGGTTTCGGGCCTGATAGATAGAATTGTGAAGCGGGAGATAGACCCGTACTCTGCCGCGGATTTGGTTCTTGAA
AAAACTCTGGGGGTGAGGGT

Downstream 100 bases:

>100_bases
TCTGGTACAGGATTCAGAAATCCCCAATTTCTTGTTATTTTTCCAGGAGTTGGTTGAACCAAATGACTTGTTGTGGAATC
CTTTACTTAACTCACAGTAA

Product: methylmalonyl-CoA epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MIKKIDHVGIAVKNLEEAIKIWEGLGLKVEEIEEVPDQKVRTAIIHVGESRIELLEPTAEDSPIAKFIAKRGEGIHHIAL
GVDNIEEHLTKLKETGYRLIDEQPRIGAGGAKIAFIHPKAVTGVLLELCERNGE

Sequences:

>Translated_134_residues
MIKKIDHVGIAVKNLEEAIKIWEGLGLKVEEIEEVPDQKVRTAIIHVGESRIELLEPTAEDSPIAKFIAKRGEGIHHIAL
GVDNIEEHLTKLKETGYRLIDEQPRIGAGGAKIAFIHPKAVTGVLLELCERNGE
>Mature_134_residues
MIKKIDHVGIAVKNLEEAIKIWEGLGLKVEEIEEVPDQKVRTAIIHVGESRIELLEPTAEDSPIAKFIAKRGEGIHHIAL
GVDNIEEHLTKLKETGYRLIDEQPRIGAGGAKIAFIHPKAVTGVLLELCERNGE

Specific function: Unknown

COG id: COG0346

COG function: function code E; Lactoylglutathione lyase and related lyases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glyoxalase I family [H]

Homologues:

Organism=Homo sapiens, GI188035928, Length=127, Percent_Identity=40.1574803149606, Blast_Score=97, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17506387, Length=129, Percent_Identity=40.3100775193798, Blast_Score=102, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360
- InterPro:   IPR018146
- InterPro:   IPR017515 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 14797; Mature: 14797

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKIDHVGIAVKNLEEAIKIWEGLGLKVEEIEEVPDQKVRTAIIHVGESRIELLEPTAE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCC
DSPIAKFIAKRGEGIHHIALGVDNIEEHLTKLKETGYRLIDEQPRIGAGGAKIAFIHPKA
CCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCHH
VTGVLLELCERNGE
HHHHHHHHHHCCCC
>Mature Secondary Structure
MIKKIDHVGIAVKNLEEAIKIWEGLGLKVEEIEEVPDQKVRTAIIHVGESRIELLEPTAE
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCC
DSPIAKFIAKRGEGIHHIALGVDNIEEHLTKLKETGYRLIDEQPRIGAGGAKIAFIHPKA
CCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEEEECCHH
VTGVLLELCERNGE
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]