| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is sfsA [H]
Identifier: 212224164
GI number: 212224164
Start: 937706
End: 938428
Strand: Reverse
Name: sfsA [H]
Synonym: TON_1015
Alternate gene names: 212224164
Gene position: 938428-937706 (Counterclockwise)
Preceding gene: 212224188
Following gene: 212224163
Centisome position: 50.79
GC content: 51.45
Gene sequence:
>723_bases ATGATTAAGATACTCCTCAGGCTTAATGTTGTACCATGTACATTCATCAAAAGGCTCAACCGCTTCGTGGCACTAGTAGA TGTTGACGGGGAAGAAAGAAAAGCCCTAGTTACAAACACCGGCCGCTTGGAAGAGTTCATGATTCCAGGGAGGAAGGCCT TCTGCGTTCCCAAGAGCGGGGGAAAGACAGACTTCGTCCTAGTTGCCTTTGAAGACCTAGGTGGAAAGGGAGCCATCATA GACACGAGGACTCAGGCCAAAGCCTTTGAGAAGGCAGTGGAGCTTGGCTTGGTTCCATGGCTTAAAGACTGCAGGATAAA GAGGAGAGAGGTAACCATTGGAAGCTCAAGGCTGGACTACCTCTTCGAGTGTCCTGGCGGAGAGGTTTACGCTGAGATGA AGAGCGCGGTTCTGAGAGGTGGGGAGAGGGGAGAATATGCTATGTATCCAGACTGTCCTACCCTGCGGGGGCAGAAGCAC ATAAAAGAGCTGATAGAGCTCCAAAAGGCCGGGAGGAAGGCAATGATTTTTTTCATCGGCGCCATACCTAGTGTTGAGAA GTTCAGGCCATACGAGAGAGGCGACCCTGAGATAGCGCGCCTTCTGAGTGAAGCCAAGAACGCTGGCGTTGAAATCCACG CGCTGAGCATTTCACTCCTTCCAGATGGTAGGGTGATCCTCGAAAGGCCGAGCCTTGAGGTTGAGCTGAGGGAGGATTTT TAA
Upstream 100 bases:
>100_bases CCACTGTTTGATTAGATCGATGTACTCAATTTCCATCCCCAACACCTATGAAAGAGTATGCATACATCAATTTAAAAGTT TTGAAAACCAAAATATAAAT
Downstream 100 bases:
>100_bases AGACCCCACCCTATTTTCAAAGGGGTAACGACCCCGCGAGGTGATGGGAATGGCCATAGTCGATGTTAGAATTTTGGTTG AAGGTGCGAGCGACGTTGAA
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MIKILLRLNVVPCTFIKRLNRFVALVDVDGEERKALVTNTGRLEEFMIPGRKAFCVPKSGGKTDFVLVAFEDLGGKGAII DTRTQAKAFEKAVELGLVPWLKDCRIKRREVTIGSSRLDYLFECPGGEVYAEMKSAVLRGGERGEYAMYPDCPTLRGQKH IKELIELQKAGRKAMIFFIGAIPSVEKFRPYERGDPEIARLLSEAKNAGVEIHALSISLLPDGRVILERPSLEVELREDF
Sequences:
>Translated_240_residues MIKILLRLNVVPCTFIKRLNRFVALVDVDGEERKALVTNTGRLEEFMIPGRKAFCVPKSGGKTDFVLVAFEDLGGKGAII DTRTQAKAFEKAVELGLVPWLKDCRIKRREVTIGSSRLDYLFECPGGEVYAEMKSAVLRGGERGEYAMYPDCPTLRGQKH IKELIELQKAGRKAMIFFIGAIPSVEKFRPYERGDPEIARLLSEAKNAGVEIHALSISLLPDGRVILERPSLEVELREDF >Mature_240_residues MIKILLRLNVVPCTFIKRLNRFVALVDVDGEERKALVTNTGRLEEFMIPGRKAFCVPKSGGKTDFVLVAFEDLGGKGAII DTRTQAKAFEKAVELGLVPWLKDCRIKRREVTIGSSRLDYLFECPGGEVYAEMKSAVLRGGERGEYAMYPDCPTLRGQKH IKELIELQKAGRKAMIFFIGAIPSVEKFRPYERGDPEIARLLSEAKNAGVEIHALSISLLPDGRVILERPSLEVELREDF
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=229, Percent_Identity=29.6943231441048, Blast_Score=84, Evalue=7e-18,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 26911; Mature: 26911
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKILLRLNVVPCTFIKRLNRFVALVDVDGEERKALVTNTGRLEEFMIPGRKAFCVPKSG CEEEEEEECCCCHHHHHHHHHEEEEEECCCCCCEEEEECCCCHHHHCCCCCEEEEEECCC GKTDFVLVAFEDLGGKGAIIDTRTQAKAFEKAVELGLVPWLKDCRIKRREVTIGSSRLDY CCCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCE LFECPGGEVYAEMKSAVLRGGERGEYAMYPDCPTLRGQKHIKELIELQKAGRKAMIFFIG EEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE AIPSVEKFRPYERGDPEIARLLSEAKNAGVEIHALSISLLPDGRVILERPSLEVELREDF CCCCHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEEECCCEEEEEECCC >Mature Secondary Structure MIKILLRLNVVPCTFIKRLNRFVALVDVDGEERKALVTNTGRLEEFMIPGRKAFCVPKSG CEEEEEEECCCCHHHHHHHHHEEEEEECCCCCCEEEEECCCCHHHHCCCCCEEEEEECCC GKTDFVLVAFEDLGGKGAIIDTRTQAKAFEKAVELGLVPWLKDCRIKRREVTIGSSRLDY CCCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCCCCE LFECPGGEVYAEMKSAVLRGGERGEYAMYPDCPTLRGQKHIKELIELQKAGRKAMIFFIG EEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE AIPSVEKFRPYERGDPEIARLLSEAKNAGVEIHALSISLLPDGRVILERPSLEVELREDF CCCCHHHCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA