| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224156
Identifier: 212224156
GI number: 212224156
Start: 930932
End: 931486
Strand: Reverse
Name: 212224156
Synonym: TON_1007
Alternate gene names: NA
Gene position: 931486-930932 (Counterclockwise)
Preceding gene: 212224157
Following gene: 212224155
Centisome position: 50.42
GC content: 50.63
Gene sequence:
>555_bases ATGGAGTCGACAAAACTCCCGGCATACATCTCCCTCCTCCTACCACTCGTATTTCTTATTGGGCTAATCGTTGTCATTTA CCAGAATCCTTGGTTTTCATTCACCGACAACGCCCTCAGCGACATGGGGTCAGTACGGAATCCCGTGAACTACTACTTCA ACGGCTTCATAATGCTCTTTGCCGTTCTGGGCTTCATAGCCTCGCTCGGGGCCTTCAAGAACGGCCTCTCTTATCTCATG CCCACCGCCATGGTCTCGCTCTTCCTTGTTGGCATCTTTCCTGAGGAATATTCCCTACATACTCCTTCAGCAACTCTCTT CTATGTCCTGGCGCTAGCGGATATAGTCCTCATAGGGCTCAAGCTCGCTCGTTCTGGCCTTTCCGTCGGGATGCTCTGGG CAATTCTTTCGGTTGTTACTTTTGTGGTGATGCTCTACATGGTGAAAGCTCGCGTTTTCAAGGGCCTTGCTATCCCCGAG CTTATAGGTGCGGCCATGATACTGGCCTGGTTTACCTATATTGGCCTGCTCCAGATTAGAGGTTCCCAACTCTAA
Upstream 100 bases:
>100_bases GAGGCATCCAGTAATAAGGGGTTCCTGGGAGGAGTTCAGAAAGCTCTACAAGGCCGTCTTCGGCGAAGAACCGAAAAATA GGGCATGTTGAGGTGATGTT
Downstream 100 bases:
>100_bases GTTGAGGAAAACTTCATATATGGCTCTCCCCTTCTTCCGAACATGAAAGCTGTTGCACTGCTCAGCTCGGGCATTGATTC TCCAGTGGCGATATACCTCA
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLFAVLGFIASLGAFKNGLSYLM PTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGLKLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPE LIGAAMILAWFTYIGLLQIRGSQL
Sequences:
>Translated_184_residues MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLFAVLGFIASLGAFKNGLSYLM PTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGLKLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPE LIGAAMILAWFTYIGLLQIRGSQL >Mature_184_residues MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLFAVLGFIASLGAFKNGLSYLM PTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGLKLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPE LIGAAMILAWFTYIGLLQIRGSQL
Specific function: Unknown
COG id: COG3371
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20264; Mature: 20264
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH AVLGFIASLGAFKNGLSYLMPTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPELIGAAMILAWFTYIGLLQIR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC GSQL CCCC >Mature Secondary Structure MESTKLPAYISLLLPLVFLIGLIVVIYQNPWFSFTDNALSDMGSVRNPVNYYFNGFIMLF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH AVLGFIASLGAFKNGLSYLMPTAMVSLFLVGIFPEEYSLHTPSATLFYVLALADIVLIGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH KLARSGLSVGMLWAILSVVTFVVMLYMVKARVFKGLAIPELIGAAMILAWFTYIGLLQIR HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC GSQL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA