| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212224105
Identifier: 212224105
GI number: 212224105
Start: 878905
End: 879852
Strand: Reverse
Name: 212224105
Synonym: TON_0956
Alternate gene names: NA
Gene position: 879852-878905 (Counterclockwise)
Preceding gene: 212224106
Following gene: 212224104
Centisome position: 47.62
GC content: 51.69
Gene sequence:
>948_bases ATGCCCACTCCTGAAAATCAAAAATCCCGAAGAAGGAAGTCAGCTCTGATTGGGCTATTCCTGACTCTCTTCATTTTGAC AGTCCCTCTGGCGGGCGGACAGACCTATGACTATGAAATAAACGCCTACGCGGTCTATTTTGAGGTCATCAGTCCGGACG ATATTAAGGAAACTATAGAGATAGACCTGACCTCGCATACAAACCTGAGCCAGTACGTTATCTACACGGACTACCCGGTT GATAACCCGAGCGCCATTGTGGAGTTGGGCAAGGGCGTTGAGACAATAAACGTGACCGTCAGGGAGGTGCTCGATGGGAC CAACGCGGTCTACCTCAACTTTCCGATGCTTAAACCTAGCCAGAGCGCCAGGATAAAGCTTACCTTCGAGACAAGAGGGA TGATAAGTGAGGCCGATGGTAAGGAGCAGTTTACATACTACATCAAGTTCAGCCAGCCAGTTGGGGTTTTCCACATGCAG CTGCTCGTTCCTAAGGGCTACGCGATTCTCTCGCCGATAATCCCATCTCCGGACAAGGTTGAAAGCTCCACCAACAGACT TCTCCTCGAGTGGACGAGGAACAACATTCGTGTGGGGGACGAGTTTTACTTCATTGTCGGCTTCTCTGGCGAGATAAAGA TCGAGAAGCCTTCGCCGCTGACTTACCTTGTCCTCTTCCTCGCAGGCATGCTCCTTGGTGCCGGCGGCGTTTACGGTTAC TTCCTCTACAACGAGCGGAAGCGTGAGAAGGAGATGGAGTTCCTGAGGGGCGACGAAGAGAAGATAATGGCAATCCTCCG TGAAGGTCCAGTTCTCCAGAGTGAGCTCGCTGAAAAGCTCGGCGTTTCCAAAGCAAAGGTCAGCATAATCCTCCGCGAGA TGGAGGAGAAGGGCCTGATCACGCGCGTGAAAGAGGGCAGAACCTACCGCATCTATATCAAAGAGTAG
Upstream 100 bases:
>100_bases TGGGCAAGTGTCCTGAAGGAGCACTCAGCATAGATCCTGTGAGCAAAAAGATAATGGTGAATCCCGAGCTCTGCATCCAC TGCAGGGAGTGTATGGACGT
Downstream 100 bases:
>100_bases CTTTATAAACCGCTCCCCTCTTCTTCCCACTGGTGAGAGACATGGAGGAGTACTTCATCTGTCCTGAGTGCGGTAGCGAT GACGTTGAAGTCATCAAAGA
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPTPENQKSRRRKSALIGLFLTLFILTVPLAGGQTYDYEINAYAVYFEVISPDDIKETIEIDLTSHTNLSQYVIYTDYPV DNPSAIVELGKGVETINVTVREVLDGTNAVYLNFPMLKPSQSARIKLTFETRGMISEADGKEQFTYYIKFSQPVGVFHMQ LLVPKGYAILSPIIPSPDKVESSTNRLLLEWTRNNIRVGDEFYFIVGFSGEIKIEKPSPLTYLVLFLAGMLLGAGGVYGY FLYNERKREKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSIILREMEEKGLITRVKEGRTYRIYIKE
Sequences:
>Translated_315_residues MPTPENQKSRRRKSALIGLFLTLFILTVPLAGGQTYDYEINAYAVYFEVISPDDIKETIEIDLTSHTNLSQYVIYTDYPV DNPSAIVELGKGVETINVTVREVLDGTNAVYLNFPMLKPSQSARIKLTFETRGMISEADGKEQFTYYIKFSQPVGVFHMQ LLVPKGYAILSPIIPSPDKVESSTNRLLLEWTRNNIRVGDEFYFIVGFSGEIKIEKPSPLTYLVLFLAGMLLGAGGVYGY FLYNERKREKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSIILREMEEKGLITRVKEGRTYRIYIKE >Mature_314_residues PTPENQKSRRRKSALIGLFLTLFILTVPLAGGQTYDYEINAYAVYFEVISPDDIKETIEIDLTSHTNLSQYVIYTDYPVD NPSAIVELGKGVETINVTVREVLDGTNAVYLNFPMLKPSQSARIKLTFETRGMISEADGKEQFTYYIKFSQPVGVFHMQL LVPKGYAILSPIIPSPDKVESSTNRLLLEWTRNNIRVGDEFYFIVGFSGEIKIEKPSPLTYLVLFLAGMLLGAGGVYGYF LYNERKREKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSIILREMEEKGLITRVKEGRTYRIYIKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35799; Mature: 35668
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPENQKSRRRKSALIGLFLTLFILTVPLAGGQTYDYEINAYAVYFEVISPDDIKETIE CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCCCEEEE IDLTSHTNLSQYVIYTDYPVDNPSAIVELGKGVETINVTVREVLDGTNAVYLNFPMLKPS EEEECCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEECCCCCC QSARIKLTFETRGMISEADGKEQFTYYIKFSQPVGVFHMQLLVPKGYAILSPIIPSPDKV CCCEEEEEEECCCCEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCC ESSTNRLLLEWTRNNIRVGDEFYFIVGFSGEIKIEKPSPLTYLVLFLAGMLLGAGGVYGY CCCCCEEEEEEECCCEEECCEEEEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE FLYNERKREKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSIILREMEEKGLI EEECCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCE TRVKEGRTYRIYIKE EEECCCCEEEEEEEC >Mature Secondary Structure PTPENQKSRRRKSALIGLFLTLFILTVPLAGGQTYDYEINAYAVYFEVISPDDIKETIE CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCCCEEEE IDLTSHTNLSQYVIYTDYPVDNPSAIVELGKGVETINVTVREVLDGTNAVYLNFPMLKPS EEEECCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEEEEHHHHHCCCCEEEEEECCCCCC QSARIKLTFETRGMISEADGKEQFTYYIKFSQPVGVFHMQLLVPKGYAILSPIIPSPDKV CCCEEEEEEECCCCEECCCCCCEEEEEEEECCCCCEEEEEEECCCCCEEECCCCCCCCCC ESSTNRLLLEWTRNNIRVGDEFYFIVGFSGEIKIEKPSPLTYLVLFLAGMLLGAGGVYGY CCCCCEEEEEEECCCEEECCEEEEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCEEEE FLYNERKREKEMEFLRGDEEKIMAILREGPVLQSELAEKLGVSKAKVSIILREMEEKGLI EEECCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCE TRVKEGRTYRIYIKE EEECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA