| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is ftnA [H]
Identifier: 212224001
GI number: 212224001
Start: 789237
End: 789761
Strand: Reverse
Name: ftnA [H]
Synonym: TON_0852
Alternate gene names: 212224001
Gene position: 789761-789237 (Counterclockwise)
Preceding gene: 212224002
Following gene: 212224000
Centisome position: 42.75
GC content: 51.81
Gene sequence:
>525_bases ATGCTGAGTGAAAGAATGTTGAAAGCTCTAAATGAACAACTTAACAGAGAACTTTATTCTGCATACTTGTACTTTGCAAT GGCAGCCTATTTCGAGGACCTCAACTTGGAAGGGTTTGCCAACTGGATGAAGGCCCAGGCCGAGGAGGAACTTGGCCACG CCCTAAGATTCTACAACTACATTTACGACAGAAATGGGAGGGTCGAGTTGAAGGCCGTAAAGGAGCCACCGAAAGAGTGG GAGTCTCCGCTGGCAGCATTTGAGGCGGCATACGAGCACGAGCAGTTCATAAGCAAGTGCATAAACGAGCTCGCTGCTCT GGCCGAGGAGGAGAAGGACTACTCAACGAGGGCATTTTTGGAGTGGTTCATCAACGAGCAGGTCGAGGAGGAGGCAAGCG TCAAGAAGATCGTTGATAAGCTCAAGTTTGCAAAGGACAGTCCGCAGGTTCTCTTCATGCTCGACCAAGAGCTCGGCCAG AGGCAGCCGCAGCTTCCGGGCCTGCTCCTCCAGTCAGAGGGCTAA
Upstream 100 bases:
>100_bases TTGGATATTTTGGAAAAGGAAGGAATAATTTAAAGTTTTTCAAAAATCTGAGGAGAAATCTTTTAAAGTAACCGGGTGTA ACTATAGGAGGGTGATGGCC
Downstream 100 bases:
>100_bases ATCCTCTGCCTGTCTTTTCCACTGCCTCTCTTTTGCATTTTGCATTGGTTCTACCTTTTCTGGATTTCTTAAGTATACAA ATTTGTGAAGAAAGGTTTTA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MLSERMLKALNEQLNRELYSAYLYFAMAAYFEDLNLEGFANWMKAQAEEELGHALRFYNYIYDRNGRVELKAVKEPPKEW ESPLAAFEAAYEHEQFISKCINELAALAEEEKDYSTRAFLEWFINEQVEEEASVKKIVDKLKFAKDSPQVLFMLDQELGQ RQPQLPGLLLQSEG
Sequences:
>Translated_174_residues MLSERMLKALNEQLNRELYSAYLYFAMAAYFEDLNLEGFANWMKAQAEEELGHALRFYNYIYDRNGRVELKAVKEPPKEW ESPLAAFEAAYEHEQFISKCINELAALAEEEKDYSTRAFLEWFINEQVEEEASVKKIVDKLKFAKDSPQVLFMLDQELGQ RQPQLPGLLLQSEG >Mature_174_residues MLSERMLKALNEQLNRELYSAYLYFAMAAYFEDLNLEGFANWMKAQAEEELGHALRFYNYIYDRNGRVELKAVKEPPKEW ESPLAAFEAAYEHEQFISKCINELAALAEEEKDYSTRAFLEWFINEQVEEEASVKKIVDKLKFAKDSPQVLFMLDQELGQ RQPQLPGLLLQSEG
Specific function: May alleviate iron toxicity in the presence of oxygen [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Homo sapiens, GI29126241, Length=137, Percent_Identity=37.2262773722628, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI56682959, Length=137, Percent_Identity=35.036496350365, Blast_Score=77, Evalue=7e-15, Organism=Homo sapiens, GI13994244, Length=138, Percent_Identity=31.1594202898551, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1788216, Length=164, Percent_Identity=39.6341463414634, Blast_Score=120, Evalue=3e-29, Organism=Escherichia coli, GI1788212, Length=158, Percent_Identity=27.8481012658228, Blast_Score=67, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17558956, Length=124, Percent_Identity=37.0967741935484, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17506345, Length=138, Percent_Identity=34.7826086956522, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI24641673, Length=156, Percent_Identity=31.4102564102564, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 20331; Mature: 20331
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSERMLKALNEQLNRELYSAYLYFAMAAYFEDLNLEGFANWMKAQAEEELGHALRFYNY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IYDRNGRVELKAVKEPPKEWESPLAAFEAAYEHEQFISKCINELAALAEEEKDYSTRAFL HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWFINEQVEEEASVKKIVDKLKFAKDSPQVLFMLDQELGQRQPQLPGLLLQSEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCCCCCCCCEEECCCC >Mature Secondary Structure MLSERMLKALNEQLNRELYSAYLYFAMAAYFEDLNLEGFANWMKAQAEEELGHALRFYNY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH IYDRNGRVELKAVKEPPKEWESPLAAFEAAYEHEQFISKCINELAALAEEEKDYSTRAFL HHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EWFINEQVEEEASVKKIVDKLKFAKDSPQVLFMLDQELGQRQPQLPGLLLQSEG HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHCCCCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA