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The map label for this gene is sufB [C]

Identifier: 212223999

GI number: 212223999

Start: 786938

End: 788365

Strand: Reverse

Name: sufB [C]

Synonym: TON_0850

Alternate gene names: 212223999

Gene position: 788365-786938 (Counterclockwise)

Preceding gene: 212224000

Following gene: 212223998

Centisome position: 42.67

GC content: 53.57

Gene sequence:

>1428_bases
ATGACAGGGCAGACAAGGCTTGAGGAGATCCTCAAGGCCGGCTCGCTGGAGGAAATCCTTGGTACGGCAGTGCCATATCC
TAAGGAAATCGAGCTGAAAGGCGAGCTGACCAGGGACATGATAGAGGAGCTTTCGCGCATAAAGAACGAGCCAGAATGGA
TGCTCAGGCACAGGCTCAAAGCTCTTGAGCTGTTCCACAAGCTCCCCATGCCTAAATGGGTAGTCGGCGTTGAGGAGCTC
GACCTTGAAAGCCTCACCCTATACTCCAAGCCCGAGATCGGCAACGAGGTCAGGGACTGGGAGGACCTGCCCGAGAACAT
AAGGAGAACCTTCGAGCGCCTGAACATTCCTGAGATAGAGAAAAAGTTCCTCTCTGGCTTAACGGCTGTCTTCGACAGCG
AAAGCGTCTACTCTAACCTCAAGGCCGAGTTCGAGAAGATGGGCATAATCATGCTCCCGATGGAGGAAGCCGTCCAGAAA
TACCCTGATCTCGTAAAGAGGTACTTTGGTAGAGTCTTTCCGGCCGGAGAGCACAAGTTTTCGGCACTGCATCACGCTCT
CTGGAGCGGTGGAGTTTTCATCTACGTCCCGAAGGGCGTTAGGATACCTTTTCCGGTTGAGGCATTCTTCGTCATAGGCT
CGGCTTTGGAAGGACAGTTCGAGCACACTCTCCTAGTTGCTGACGAGGGGAGCTACATCCACTTCATAGAAGGCTGTTCT
GCGCCGATGTACAAGGGCTTCTCCTTCCACGACGGAATGGTCGAGATATACGCCCACAAGGGAGCGACCGTCAAGTTCAC
CACGATACAGAACTGGAGCAGGAACGTCATCAACTTCAACAACAAGCGCGCGATAATCGAGGAGAACGCCTACGTCGAGT
GGATTGAGGGGAGTATAGGAAGTAAGATAACCTACACATACCCGTCGAGCGTCCTGAAGGGAGAAGGGGCGAGGACGGCT
CAATATGTCGTTTCGCTCAGCAACGGGCCCTTCATGAAGGACACCGGGGCCAAAACCTGGCACCTCGCACCCAACACTAG
CTCCAAGATAGTCTCGAAGAGCATAAGCGCCAACGGCGGAATCAACATCTATCGCGGACTGGTGAGGATCTTGAAGGGAG
CTAAAAATTCGACGGCGACGGTATCTTGTGACTCACTCATACTCGACGAGGAGAGCAAGGCCTACACCTATCCACACAAC
CAGAACGACGAGCCAAGCGCGAGCATAATCCACGAAGCCACCACTGGAAAGCTCGGCGAGGACAAGCTCTTCTACATGAA
CTCGCGCGGAATAGGTGAGGAGGAAGCGAAGAGCCTTATAGTGCTTGGCTTCATTAGCGAAATCCTTGAGGGGTTGCCTT
TCGAGTACGTTGAGGTGCTCAAGAAGGTCATAGAGCTGGAGTTCAGTGAGGTTGGGGGTGTTGGCTGA

Upstream 100 bases:

>100_bases
CAGAGAGTTCACATCATCAAGGATGGGCGGCTTGTCGTTTCTGGCGGAATGGAGCTTGTAAAACTCATTGAAGAGAAAGG
CTTCGCGGCGGTGAAAGACA

Downstream 100 bases:

>100_bases
TGCATTCCATGCTTCCAAAAATAACTCTTGAGAAGCTTGAAGCCCTTGAGTACCAGAAGTACGGTGACAGCCCGACCATA
AAGAGCTACACCAAGTGGAA

Product: protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 475; Mature: 474

Protein sequence:

>475_residues
MTGQTRLEEILKAGSLEEILGTAVPYPKEIELKGELTRDMIEELSRIKNEPEWMLRHRLKALELFHKLPMPKWVVGVEEL
DLESLTLYSKPEIGNEVRDWEDLPENIRRTFERLNIPEIEKKFLSGLTAVFDSESVYSNLKAEFEKMGIIMLPMEEAVQK
YPDLVKRYFGRVFPAGEHKFSALHHALWSGGVFIYVPKGVRIPFPVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCS
APMYKGFSFHDGMVEIYAHKGATVKFTTIQNWSRNVINFNNKRAIIEENAYVEWIEGSIGSKITYTYPSSVLKGEGARTA
QYVVSLSNGPFMKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRILKGAKNSTATVSCDSLILDEESKAYTYPHN
QNDEPSASIIHEATTGKLGEDKLFYMNSRGIGEEEAKSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG

Sequences:

>Translated_475_residues
MTGQTRLEEILKAGSLEEILGTAVPYPKEIELKGELTRDMIEELSRIKNEPEWMLRHRLKALELFHKLPMPKWVVGVEEL
DLESLTLYSKPEIGNEVRDWEDLPENIRRTFERLNIPEIEKKFLSGLTAVFDSESVYSNLKAEFEKMGIIMLPMEEAVQK
YPDLVKRYFGRVFPAGEHKFSALHHALWSGGVFIYVPKGVRIPFPVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCS
APMYKGFSFHDGMVEIYAHKGATVKFTTIQNWSRNVINFNNKRAIIEENAYVEWIEGSIGSKITYTYPSSVLKGEGARTA
QYVVSLSNGPFMKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRILKGAKNSTATVSCDSLILDEESKAYTYPHN
QNDEPSASIIHEATTGKLGEDKLFYMNSRGIGEEEAKSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG
>Mature_474_residues
TGQTRLEEILKAGSLEEILGTAVPYPKEIELKGELTRDMIEELSRIKNEPEWMLRHRLKALELFHKLPMPKWVVGVEELD
LESLTLYSKPEIGNEVRDWEDLPENIRRTFERLNIPEIEKKFLSGLTAVFDSESVYSNLKAEFEKMGIIMLPMEEAVQKY
PDLVKRYFGRVFPAGEHKFSALHHALWSGGVFIYVPKGVRIPFPVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCSA
PMYKGFSFHDGMVEIYAHKGATVKFTTIQNWSRNVINFNNKRAIIEENAYVEWIEGSIGSKITYTYPSSVLKGEGARTAQ
YVVSLSNGPFMKDTGAKTWHLAPNTSSKIVSKSISANGGINIYRGLVRILKGAKNSTATVSCDSLILDEESKAYTYPHNQ
NDEPSASIIHEATTGKLGEDKLFYMNSRGIGEEEAKSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=459, Percent_Identity=38.1263616557734, Blast_Score=336, Evalue=2e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 53353; Mature: 53221

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGQTRLEEILKAGSLEEILGTAVPYPKEIELKGELTRDMIEELSRIKNEPEWMLRHRLK
CCCHHHHHHHHHCCCHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALELFHKLPMPKWVVGVEELDLESLTLYSKPEIGNEVRDWEDLPENIRRTFERLNIPEIE
HHHHHHHCCCCHHEECHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
KKFLSGLTAVFDSESVYSNLKAEFEKMGIIMLPMEEAVQKYPDLVKRYFGRVFPAGEHKF
HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHH
SALHHALWSGGVFIYVPKGVRIPFPVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCS
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCC
APMYKGFSFHDGMVEIYAHKGATVKFTTIQNWSRNVINFNNKRAIIEENAYVEWIEGSIG
CCHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEECCCCEEEEECCCEEEEECCCCC
SKITYTYPSSVLKGEGARTAQYVVSLSNGPFMKDTGAKTWHLAPNTSSKIVSKSISANGG
CEEEEECCCHHHCCCCCCEEEEEEEECCCCEECCCCCCEEEECCCCHHHHHHHHCCCCCC
INIYRGLVRILKGAKNSTATVSCDSLILDEESKAYTYPHNQNDEPSASIIHEATTGKLGE
HHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCEEECCCCCCCCCCHHHEEHHCCCCCCC
DKLFYMNSRGIGEEEAKSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG
CEEEEECCCCCCHHHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TGQTRLEEILKAGSLEEILGTAVPYPKEIELKGELTRDMIEELSRIKNEPEWMLRHRLK
CCHHHHHHHHHCCCHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALELFHKLPMPKWVVGVEELDLESLTLYSKPEIGNEVRDWEDLPENIRRTFERLNIPEIE
HHHHHHHCCCCHHEECHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHH
KKFLSGLTAVFDSESVYSNLKAEFEKMGIIMLPMEEAVQKYPDLVKRYFGRVFPAGEHKF
HHHHHHHHHHHCCHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCHHH
SALHHALWSGGVFIYVPKGVRIPFPVEAFFVIGSALEGQFEHTLLVADEGSYIHFIEGCS
HHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCC
APMYKGFSFHDGMVEIYAHKGATVKFTTIQNWSRNVINFNNKRAIIEENAYVEWIEGSIG
CCHHCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEECCCCEEEEECCCEEEEECCCCC
SKITYTYPSSVLKGEGARTAQYVVSLSNGPFMKDTGAKTWHLAPNTSSKIVSKSISANGG
CEEEEECCCHHHCCCCCCEEEEEEEECCCCEECCCCCCEEEECCCCHHHHHHHHCCCCCC
INIYRGLVRILKGAKNSTATVSCDSLILDEESKAYTYPHNQNDEPSASIIHEATTGKLGE
HHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCEEECCCCCCCCCCHHHEEHHCCCCCCC
DKLFYMNSRGIGEEEAKSLIVLGFISEILEGLPFEYVEVLKKVIELEFSEVGGVG
CEEEEECCCCCCHHHHHHEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA