| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223979
Identifier: 212223979
GI number: 212223979
Start: 769158
End: 769862
Strand: Reverse
Name: 212223979
Synonym: TON_0830
Alternate gene names: NA
Gene position: 769862-769158 (Counterclockwise)
Preceding gene: 212223980
Following gene: 212223968
Centisome position: 41.67
GC content: 51.06
Gene sequence:
>705_bases ATGAGTTTTGTGAAGAAGTTCCTCGCCATTTACAGGATTGACTGGAAGATGCTGAAAAGGGACCCGATGCTCGTTTACAG CATCATCATTACCATAATCCTTCTTTTCGTCGTCCGCTACTTCAAGGACCGGCTGGGGGTTCTCTATCCGCCTGCAGCAA TCTTTTCCATCATCTTCATTCCCCTCATCTTCGGCATGATTCCTGGCTTCATGATGGCCAACGAAAAGGAAGAGAAAACT ATAGAGGCCCTTCAGGTGATTCCGATATCGAGCGAGGCCTTCTTGACATACCGGCTCCTCTGGGCGTCTGCTGTAACGGG TATCCTCACGGGCCTAGCGCCGAAAATTCTTGACATAACTGTTCCGTGGAAAGGCCTCCTGGCGCTCATGGCACTTTTCA TCATTGAAGTGTGGACCTATGCGCTGTTGATAACTGACTTCTCGGAGACTAGGATGCAGGCTTTGACAGTTTCAAAAGTC GCCGGCTGGCTGCTAATCCTTCCGCCGGCCATAAAGTTCATCGTGATCGCCAGGAACATATCAACTGATTGGAGCAAGTT CACGGCCTTTCTTCCGACCTACTGGATCCACAGGCTCTTCGAGGGGATTCCTTTCAACGACTACGGCGATTTCTGGCCGG GGCTGGCGGTTCACCTAGCGTGGCTTGTCCCACTTGTAGTGCTGTTCAAGAAGAGGGTGCTTTGA
Upstream 100 bases:
>100_bases AAACGCTGATGTGGTCGGGCATTGCCCTTGTAATCTGGGGCATCGTAGCATACAACCTCGCTAAAATCCGCTTTTACAAA TACGCCGTGGAGGGATTGAG
Downstream 100 bases:
>100_bases AAATCCTTGCTTTAGCTTTTATTTTGGGCTTTACAGCCCAACAGAAGAGAAATCAGAAAAGAAGGGCAAAAGTCCATTTT CACTCAAGCTTCTTGTAACA
Product: permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MSFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFIPLIFGMIPGFMMANEKEEKT IEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDITVPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKV AGWLLILPPAIKFIVIARNISTDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL
Sequences:
>Translated_234_residues MSFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFIPLIFGMIPGFMMANEKEEKT IEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDITVPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKV AGWLLILPPAIKFIVIARNISTDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL >Mature_233_residues SFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFIPLIFGMIPGFMMANEKEEKTI EALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDITVPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKVA GWLLILPPAIKFIVIARNISTDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26892; Mature: 26761
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFI CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PLIFGMIPGFMMANEKEEKTIEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDIT HHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEE VPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKVAGWLLILPPAIKFIVIARNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC STDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SFVKKFLAIYRIDWKMLKRDPMLVYSIIITIILLFVVRYFKDRLGVLYPPAAIFSIIFI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH PLIFGMIPGFMMANEKEEKTIEALQVIPISSEAFLTYRLLWASAVTGILTGLAPKILDIT HHHHHHHCHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHEEE VPWKGLLALMALFIIEVWTYALLITDFSETRMQALTVSKVAGWLLILPPAIKFIVIARNI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC STDWSKFTAFLPTYWIHRLFEGIPFNDYGDFWPGLAVHLAWLVPLVVLFKKRVL CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA