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The map label for this gene is eif1a [H]

Identifier: 212223916

GI number: 212223916

Start: 714144

End: 714500

Strand: Reverse

Name: eif1a [H]

Synonym: TON_0767

Alternate gene names: 212223916

Gene position: 714500-714144 (Counterclockwise)

Preceding gene: 212223920

Following gene: 212223915

Centisome position: 38.67

GC content: 57.14

Gene sequence:

>357_bases
ATGGCCTACCATAAGGGTGGTAAAAAGAAGAACAGGCAGGTTCAGGGGGATGAGGTCATTCGTGTTCCCCTTCCAAAAGA
GGGACAGCTGTTCGGAGTTATCGAGCAGGCTCTCGGAGCCGGATGGATGGACGTTCGCTGCTCCGACGGAAAGGTCAGGA
GATGCAGGATACCCGGCAAGCTCAAGAGGAGGATGTGGATGCGCGTCGGCGACGTCGTCATAGTCCAGCCCTGGCCGGTT
CAGACGGACGAGAGAGGGGACATAGTCTACCGCTACACTAAGACACAGGTTGACTGGCTCCTGAGGAAGGGCAAGATAAG
CCAGGATTTCCTCACGGGCGGCGAGCTGCTCTTCTGA

Upstream 100 bases:

>100_bases
GTGCAAAAATTTTAAAAGTCTGTCGCCTAAGGGTCATTGGAAAATTTTTGCAAGGCTTAAGCTTATAAGGGCTCAAGCCT
AGGGGGAGGAGGTGATGCTC

Downstream 100 bases:

>100_bases
GCTCTCAAAACCCTTTGAGTGATAGCGATGCGCGAGGAGTTCATCGAGCGGGAAGTCGAGGAGATGCTCGGTCTCACGGA
GAGACGCGAAAAGGACAGCG

Product: translation initiation factor IF-1A

Products: NA

Alternate protein names: aIF-1A [H]

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MAYHKGGKKKNRQVQGDEVIRVPLPKEGQLFGVIEQALGAGWMDVRCSDGKVRRCRIPGKLKRRMWMRVGDVVIVQPWPV
QTDERGDIVYRYTKTQVDWLLRKGKISQDFLTGGELLF

Sequences:

>Translated_118_residues
MAYHKGGKKKNRQVQGDEVIRVPLPKEGQLFGVIEQALGAGWMDVRCSDGKVRRCRIPGKLKRRMWMRVGDVVIVQPWPV
QTDERGDIVYRYTKTQVDWLLRKGKISQDFLTGGELLF
>Mature_117_residues
AYHKGGKKKNRQVQGDEVIRVPLPKEGQLFGVIEQALGAGWMDVRCSDGKVRRCRIPGKLKRRMWMRVGDVVIVQPWPVQ
TDERGDIVYRYTKTQVDWLLRKGKISQDFLTGGELLF

Specific function: Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits [H]

COG id: COG0361

COG function: function code J; Translation initiation factor 1 (IF-1)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1-like domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17540984, Length=107, Percent_Identity=35.5140186915888, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR006196
- InterPro:   IPR001253
- InterPro:   IPR018104
- ProDom:   PD005579 [H]

Pfam domain/function: PF01176 eIF-1a [H]

EC number: NA

Molecular weight: Translated: 13614; Mature: 13483

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS50832 S1_IF1_TYPE ; PS01262 IF1A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYHKGGKKKNRQVQGDEVIRVPLPKEGQLFGVIEQALGAGWMDVRCSDGKVRRCRIPGK
CCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCEEEEECCHH
LKRRMWMRVGDVVIVQPWPVQTDERGDIVYRYTKTQVDWLLRKGKISQDFLTGGELLF
HHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCHHCCCCEECC
>Mature Secondary Structure 
AYHKGGKKKNRQVQGDEVIRVPLPKEGQLFGVIEQALGAGWMDVRCSDGKVRRCRIPGK
CCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHCCCEEEEEECCCCEEEEECCHH
LKRRMWMRVGDVVIVQPWPVQTDERGDIVYRYTKTQVDWLLRKGKISQDFLTGGELLF
HHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA