Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223910

Identifier: 212223910

GI number: 212223910

Start: 708121

End: 708531

Strand: Reverse

Name: 212223910

Synonym: TON_0761

Alternate gene names: NA

Gene position: 708531-708121 (Counterclockwise)

Preceding gene: 212223911

Following gene: 212223909

Centisome position: 38.35

GC content: 52.07

Gene sequence:

>411_bases
ATGAGGGTGGAGATAAAGGCCAGAAACAACGCCGAGCTCATAAGGAAACTCAATGAAGTCTTAAACGACGAGGTTACCGA
GGTCTACATCAACCTCCGCCCGACAAAGGAGATACTCGTGAGGATACTTGAGCGTGCGCCGAACGTTAGGAAAATCTCCT
GTCCGCCGAGTCTCTATCCCAAGGTCTCGAAAAAAGCGATAAACGCCCTTGCGCAGATGGGCATAGAGCTCGTTCCCGAG
GGCTATCCCCGTGGAAGGCCGCGGAAGTACGATGAGCGGACTATCCGCGAGGTTTACAACCTTATACGGAAGGGTATAAC
CCCCAAGGAGATAAGCTCCCGCATGGGAATTCCGCTAAGGACGGTTTACTACATGATCGAGCAGATAGGTGCTCGGCAAT
GGAAAGAATGA

Upstream 100 bases:

>100_bases
CTCCACAAGACGCTCTTCGCCGACACCAAGAAGTTCGAGAAGTTCATGCCCAAGAGCGACAGGGCGAAGCAGTTCCTAGC
GCTCCTCCAGGGGTGAGGAC

Downstream 100 bases:

>100_bases
AGGCCCTCTACGGGGTCCTTTTCTCCACTCTCCTTATCACCTTAGCCCTTCTCGGAAGCACGGCCGTTTACGGTGGCGTC
ACGGTGTTCAACATCGAATG

Product: DNA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYPKVSKKAINALAQMGIELVPE
GYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLRTVYYMIEQIGARQWKE

Sequences:

>Translated_136_residues
MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYPKVSKKAINALAQMGIELVPE
GYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLRTVYYMIEQIGARQWKE
>Mature_136_residues
MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYPKVSKKAINALAQMGIELVPE
GYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLRTVYYMIEQIGARQWKE

Specific function: Unknown

COG id: COG1710

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15904; Mature: 15904

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYP
CEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCH
KVSKKAINALAQMGIELVPEGYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLR
HHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
TVYYMIEQIGARQWKE
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRVEIKARNNAELIRKLNEVLNDEVTEVYINLRPTKEILVRILERAPNVRKISCPPSLYP
CEEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCEEECCCCCCCH
KVSKKAINALAQMGIELVPEGYPRGRPRKYDERTIREVYNLIRKGITPKEISSRMGIPLR
HHHHHHHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
TVYYMIEQIGARQWKE
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA