| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
Click here to switch to the map view.
The map label for this gene is 212223824
Identifier: 212223824
GI number: 212223824
Start: 628774
End: 629355
Strand: Reverse
Name: 212223824
Synonym: TON_0676
Alternate gene names: NA
Gene position: 629355-628774 (Counterclockwise)
Preceding gene: 212223825
Following gene: 212223821
Centisome position: 34.06
GC content: 43.3
Gene sequence:
>582_bases ATGAGCAAGGCTCTGGAAATGTTTATGGAAAAGGCCAGCATAAACGAAAACGTCATGAAAACTCTTCGTGAAATATCCAA GCGCTCATTGAAAGAAATCCTTTCATACATCATCAAAGGAGAAAGAGACGCTACGGGACTTTATACGTTCCTGCACCAAA ACATGCCTGAGGAGTACGCAAAAAAGAAATTCAAGGAGTTCGTTGAGATTGAGGAAAGTCACGACAAGAGAGTCCGGACG ATATTTGAGGGTCTGTTCCCCGGAGAAGAACCATTAGATATGCCTTTGAATAGCTGGGCAGAGGTTCTTGCGGAGAAAGA CTTCCGGCTTAAAAATGTAGAGGATTATCTAACTGTACTGCGTATAGGTATGGATACCGAGAAGCTTTCGGAAGCTATCT ACATAGTGCTCATGGAGAGGCTGGAAGATCCAGAACACAAACGTATCATGAGCGAACTCGCAAACGATGAGAGAGATCAC TATGAGTTTCTAAAGAAAGAATACGACTTTTACTCCAAAGTTGAAGCCAAGAAGTCCCTGGAGGAACTCGTTAGAGAGCT CAGAGAAAAGAAGGGGGCTTAA
Upstream 100 bases:
>100_bases TGCTACTGATTATACAAGGTTGTAGGAAATATTACAGGTCACGGTATCCTCGAAAAAAGTTTTTTAACAAGTGCCCACTA ATTGCCTTCAGGGATGTGAT
Downstream 100 bases:
>100_bases GATTTTTCTATGCTTTTTAGCAGTTGTAGCACAGCATCGCGGCCTTCTTGAGAAGTATGACCCTGTAAAGCTTGCCGTTG ATTATTCTAGGGTTGGAAAT
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSKALEMFMEKASINENVMKTLREISKRSLKEILSYIIKGERDATGLYTFLHQNMPEEYAKKKFKEFVEIEESHDKRVRT IFEGLFPGEEPLDMPLNSWAEVLAEKDFRLKNVEDYLTVLRIGMDTEKLSEAIYIVLMERLEDPEHKRIMSELANDERDH YEFLKKEYDFYSKVEAKKSLEELVRELREKKGA
Sequences:
>Translated_193_residues MSKALEMFMEKASINENVMKTLREISKRSLKEILSYIIKGERDATGLYTFLHQNMPEEYAKKKFKEFVEIEESHDKRVRT IFEGLFPGEEPLDMPLNSWAEVLAEKDFRLKNVEDYLTVLRIGMDTEKLSEAIYIVLMERLEDPEHKRIMSELANDERDH YEFLKKEYDFYSKVEAKKSLEELVRELREKKGA >Mature_192_residues SKALEMFMEKASINENVMKTLREISKRSLKEILSYIIKGERDATGLYTFLHQNMPEEYAKKKFKEFVEIEESHDKRVRTI FEGLFPGEEPLDMPLNSWAEVLAEKDFRLKNVEDYLTVLRIGMDTEKLSEAIYIVLMERLEDPEHKRIMSELANDERDHY EFLKKEYDFYSKVEAKKSLEELVRELREKKGA
Specific function: Unknown
COG id: COG1633
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22970; Mature: 22839
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKALEMFMEKASINENVMKTLREISKRSLKEILSYIIKGERDATGLYTFLHQNMPEEYA CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH KKKFKEFVEIEESHDKRVRTIFEGLFPGEEPLDMPLNSWAEVLAEKDFRLKNVEDYLTVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH RIGMDTEKLSEAIYIVLMERLEDPEHKRIMSELANDERDHYEFLKKEYDFYSKVEAKKSL HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EELVRELREKKGA HHHHHHHHHHCCC >Mature Secondary Structure SKALEMFMEKASINENVMKTLREISKRSLKEILSYIIKGERDATGLYTFLHQNMPEEYA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHH KKKFKEFVEIEESHDKRVRTIFEGLFPGEEPLDMPLNSWAEVLAEKDFRLKNVEDYLTVL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH RIGMDTEKLSEAIYIVLMERLEDPEHKRIMSELANDERDHYEFLKKEYDFYSKVEAKKSL HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH EELVRELREKKGA HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA