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The map label for this gene is yhfE [H]

Identifier: 212223775

GI number: 212223775

Start: 584768

End: 585790

Strand: Reverse

Name: yhfE [H]

Synonym: TON_0627

Alternate gene names: 212223775

Gene position: 585790-584768 (Counterclockwise)

Preceding gene: 212223776

Following gene: 212223774

Centisome position: 31.71

GC content: 56.3

Gene sequence:

>1023_bases
ATGGAGAGAGTCGTTAGGATACTCAAGGAGATTCTGGAGATACCTTCCCCGACAGGATACACTCAGGAGGTTTTAGCCCA
CATTGAGAAGCTCCTGAACGAGAACGGCGTAAAGACGTACTACACCAACAAAGGGGCTCTGATAGCTGGCAATCACTCGG
AGCCGGAGCTTGTGATAGCGGCCCATGTTGACACCCTCGGGGCGATGGTGAGGGGAATACTTCCCAACGGGCATCTGAGC
TTCACCAGAATCGGCGGCCTTCTCCTCCCGACGTTTGAAGGGGAGTACTGCACAATAATCACCCGCTCGGGCAAGCGCTA
CCGCGGAACGCTACTCCTTAGGAACCCGAGTGTTCACGTGAATAAGGAGGCAGGAAAGAAGGAACGCAAAGAGGAGAACA
TGTACATCCGCCTTGATGAACTCGTCGAGAAGAAGGAAGACACCGAGAAGCTCGGGATAAGGCCCGGGGACTTCATAGCC
TTCGATCCGAAGTTTGAGTACGTCAACGGCTTCGTCAAGGCCCACTTCCTCGACGACAAGGCCAGCGTTGCGGTTATGAT
GGACCTCATGCTTGACCTTGGAGCGGAAACCCTCGAAAAGCTCCCCGTGGCGTTCTTCTTCTCGCCCTACGAGGAGGTCG
GCCACGGTGGTTCGGCGGGTTATCCGCCGAGCATGAAGGAACTTTTAGTCGTGGACATGGGCGTCGTTGGCGAGGGCGTT
GCTGGCAAAGAGACTGCCGTTTCAATAGCGGCTAAGGATTCAAGCGGCCCCTACGACTACGGCATGACGACGAAGCTTAT
CGAGCTGGCCGAGAAGCATGAAATCCCCCACGTCATCGACGTCTTCCCCTACTACGGCTCCGACGGTTCAGCGGCCTTAA
GGGCGGGCTGGGACGTCAGGGTTGCACTCATCGGGCCGGGAGTTCATGCCAGCCACGGCATGGAGAGGACTCACGTCAAG
GGGCTTAAGGCGACGAAGGATCTGGTGAGGGCATACATTGAGAGTAAATACCGCCTTGAATGA

Upstream 100 bases:

>100_bases
TGACAGCTATCGGGCTCTTCATGGTTCTTAGGGCACTCGGGGTCTGAGGACCTCCAGTGGGGTTTTAAATCTCAGCGATG
AATCTCCAGCGGTGATTAAT

Downstream 100 bases:

>100_bases
ATGTACTTCTATTTCTTCCCAATTTATCTAGAACCTTTAATGAGTGTATTACCAACTTGTTCGTTACATATGACTATGTT
AAAAGAAAATTTTTATACTT

Product: deblocking aminopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MERVVRILKEILEIPSPTGYTQEVLAHIEKLLNENGVKTYYTNKGALIAGNHSEPELVIAAHVDTLGAMVRGILPNGHLS
FTRIGGLLLPTFEGEYCTIITRSGKRYRGTLLLRNPSVHVNKEAGKKERKEENMYIRLDELVEKKEDTEKLGIRPGDFIA
FDPKFEYVNGFVKAHFLDDKASVAVMMDLMLDLGAETLEKLPVAFFFSPYEEVGHGGSAGYPPSMKELLVVDMGVVGEGV
AGKETAVSIAAKDSSGPYDYGMTTKLIELAEKHEIPHVIDVFPYYGSDGSAALRAGWDVRVALIGPGVHASHGMERTHVK
GLKATKDLVRAYIESKYRLE

Sequences:

>Translated_340_residues
MERVVRILKEILEIPSPTGYTQEVLAHIEKLLNENGVKTYYTNKGALIAGNHSEPELVIAAHVDTLGAMVRGILPNGHLS
FTRIGGLLLPTFEGEYCTIITRSGKRYRGTLLLRNPSVHVNKEAGKKERKEENMYIRLDELVEKKEDTEKLGIRPGDFIA
FDPKFEYVNGFVKAHFLDDKASVAVMMDLMLDLGAETLEKLPVAFFFSPYEEVGHGGSAGYPPSMKELLVVDMGVVGEGV
AGKETAVSIAAKDSSGPYDYGMTTKLIELAEKHEIPHVIDVFPYYGSDGSAALRAGWDVRVALIGPGVHASHGMERTHVK
GLKATKDLVRAYIESKYRLE
>Mature_340_residues
MERVVRILKEILEIPSPTGYTQEVLAHIEKLLNENGVKTYYTNKGALIAGNHSEPELVIAAHVDTLGAMVRGILPNGHLS
FTRIGGLLLPTFEGEYCTIITRSGKRYRGTLLLRNPSVHVNKEAGKKERKEENMYIRLDELVEKKEDTEKLGIRPGDFIA
FDPKFEYVNGFVKAHFLDDKASVAVMMDLMLDLGAETLEKLPVAFFFSPYEEVGHGGSAGYPPSMKELLVVDMGVVGEGV
AGKETAVSIAAKDSSGPYDYGMTTKLIELAEKHEIPHVIDVFPYYGSDGSAALRAGWDVRVALIGPGVHASHGMERTHVK
GLKATKDLVRAYIESKYRLE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 37490; Mature: 37490

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVVRILKEILEIPSPTGYTQEVLAHIEKLLNENGVKTYYTNKGALIAGNHSEPELVIA
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCEEEE
AHVDTLGAMVRGILPNGHLSFTRIGGLLLPTFEGEYCTIITRSGKRYRGTLLLRNPSVHV
ECHHHHHHHHHHCCCCCCEEHEECCCEEEECCCCCEEEEEECCCCCEEEEEEEECCCEEE
NKEAGKKERKEENMYIRLDELVEKKEDTEKLGIRPGDFIAFDPKFEYVNGFVKAHFLDDK
EHHHCHHHHHHCCEEEEHHHHHHHHCCHHHHCCCCCCEEEECCCHHHHCCEEEEEEECCC
ASVAVMMDLMLDLGAETLEKLPVAFFFSPYEEVGHGGSAGYPPSMKELLVVDMGVVGEGV
HHHHHHHHHHHHCCHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHHEEEECCCCCCCC
AGKETAVSIAAKDSSGPYDYGMTTKLIELAEKHEIPHVIDVFPYYGSDGSAALRAGWDVR
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCEECCCCCEEEECCCEEE
VALIGPGVHASHGMERTHVKGLKATKDLVRAYIESKYRLE
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MERVVRILKEILEIPSPTGYTQEVLAHIEKLLNENGVKTYYTNKGALIAGNHSEPELVIA
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEEEECCCCCCCEEEE
AHVDTLGAMVRGILPNGHLSFTRIGGLLLPTFEGEYCTIITRSGKRYRGTLLLRNPSVHV
ECHHHHHHHHHHCCCCCCEEHEECCCEEEECCCCCEEEEEECCCCCEEEEEEEECCCEEE
NKEAGKKERKEENMYIRLDELVEKKEDTEKLGIRPGDFIAFDPKFEYVNGFVKAHFLDDK
EHHHCHHHHHHCCEEEEHHHHHHHHCCHHHHCCCCCCEEEECCCHHHHCCEEEEEEECCC
ASVAVMMDLMLDLGAETLEKLPVAFFFSPYEEVGHGGSAGYPPSMKELLVVDMGVVGEGV
HHHHHHHHHHHHCCHHHHHHCCEEEEECCHHHHCCCCCCCCCCCHHHHEEEECCCCCCCC
AGKETAVSIAAKDSSGPYDYGMTTKLIELAEKHEIPHVIDVFPYYGSDGSAALRAGWDVR
CCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCEECCCCCEEEECCCEEE
VALIGPGVHASHGMERTHVKGLKATKDLVRAYIESKYRLE
EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]