| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223720
Identifier: 212223720
GI number: 212223720
Start: 525810
End: 526328
Strand: Reverse
Name: 212223720
Synonym: TON_0572
Alternate gene names: NA
Gene position: 526328-525810 (Counterclockwise)
Preceding gene: 212223727
Following gene: 212223716
Centisome position: 28.49
GC content: 54.14
Gene sequence:
>519_bases ATGAGGAGCTCAGAACTTAAGTTCTGGCTTTTAGTGGTTCTTGTCTTCGCCCTCACCCATCCCGGCTCTATCGCCTTCGC CAACTGGGACGCTCCCTACGGGTTTTACAAAGACCTTTCGGTCTGGCTCAGCTCCGCGGCAGGTGGATTGTTGCTGGTGC TCACCTACGGCGTGCACGAGTGGAAAAATGGAAAGCTGAGTTCCCCGAACCTTCTTCTGGCGGCGATTCTGGTGGTTTCA ACTGCCATAATCGGCTACCGTGCGGAGCTTGCTCTCGGAGAGAAGATGGATTACGGCAGTGAAAACATGGTGTTTTTCGT AATCGGGGGAGTCCTCGGATTTACGTTATCGATAATGCTCCTCCCGCTTTCCCTGCCCTACGCCCTCACAGGGGAGCTCT ACTACTCCTACGATAGGCCATTGCTGGTGGCGTGGCTCCTTACGGTGGCCTTGGCTGTTTTCCTCGGCGTTTCCTACGTA AAGATAAGAAAGGCAGAGAGACCTCACGGCACAGGATAA
Upstream 100 bases:
>100_bases CGGCTATGAGGCCAATGCCAAGGCCGAGGATGAAGTCCAGGAGGTAATTCAACATAAAAACTCTTTTTAGAGGGAGCGTT AAAAATCCTCCGGTGGTTCT
Downstream 100 bases:
>100_bases CCCAGCCCCTTCAGAATCATCCTCAGGGCAAGCAGAGCCATGACGACCGCGAAGGCGTTCTTCAGGTTCTTCGCCTTGGT TCTCTTGGCAATCCTTGCCC
Product: membrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MRSSELKFWLLVVLVFALTHPGSIAFANWDAPYGFYKDLSVWLSSAAGGLLLVLTYGVHEWKNGKLSSPNLLLAAILVVS TAIIGYRAELALGEKMDYGSENMVFFVIGGVLGFTLSIMLLPLSLPYALTGELYYSYDRPLLVAWLLTVALAVFLGVSYV KIRKAERPHGTG
Sequences:
>Translated_172_residues MRSSELKFWLLVVLVFALTHPGSIAFANWDAPYGFYKDLSVWLSSAAGGLLLVLTYGVHEWKNGKLSSPNLLLAAILVVS TAIIGYRAELALGEKMDYGSENMVFFVIGGVLGFTLSIMLLPLSLPYALTGELYYSYDRPLLVAWLLTVALAVFLGVSYV KIRKAERPHGTG >Mature_172_residues MRSSELKFWLLVVLVFALTHPGSIAFANWDAPYGFYKDLSVWLSSAAGGLLLVLTYGVHEWKNGKLSSPNLLLAAILVVS TAIIGYRAELALGEKMDYGSENMVFFVIGGVLGFTLSIMLLPLSLPYALTGELYYSYDRPLLVAWLLTVALAVFLGVSYV KIRKAERPHGTG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18849; Mature: 18849
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSELKFWLLVVLVFALTHPGSIAFANWDAPYGFYKDLSVWLSSAAGGLLLVLTYGVHE CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHH WKNGKLSSPNLLLAAILVVSTAIIGYRAELALGEKMDYGSENMVFFVIGGVLGFTLSIML CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LPLSLPYALTGELYYSYDRPLLVAWLLTVALAVFLGVSYVKIRKAERPHGTG HHHCCCCEEECCEEEECCCHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCC >Mature Secondary Structure MRSSELKFWLLVVLVFALTHPGSIAFANWDAPYGFYKDLSVWLSSAAGGLLLVLTYGVHE CCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHH WKNGKLSSPNLLLAAILVVSTAIIGYRAELALGEKMDYGSENMVFFVIGGVLGFTLSIML CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHHH LPLSLPYALTGELYYSYDRPLLVAWLLTVALAVFLGVSYVKIRKAERPHGTG HHHCCCCEEECCEEEECCCHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA