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The map label for this gene is vhuG [H]

Identifier: 212223683

GI number: 212223683

Start: 489614

End: 490411

Strand: Reverse

Name: vhuG [H]

Synonym: TON_0535

Alternate gene names: 212223683

Gene position: 490411-489614 (Counterclockwise)

Preceding gene: 212223684

Following gene: 212223682

Centisome position: 26.54

GC content: 52.26

Gene sequence:

>798_bases
ATGGAGGGGAAGGTTCGTATAGGGTTTTACGCTCTCACCTCATGCTACGGCTGTCAGCTCCGGTTCGCCATGATGGACGA
GATACTTCAGCTGCTCCCGAACGCTGAAATCGTCTGCTGGTACATGCTTGACCGTGACAGCAGTGAAGATGAGCCCGTCG
ATATAGCCTTCATCGAAGGAAGCGTTTCAACAGAGGAAGAGGTTGAACTCGTCAAGAAGATACGCGAGAACGCCAAGATA
GTCGTTGCAGTTGGGGCGTGTGCAACCCAGGGTGGGGTTCAGAGCTGGGAGAAGGATAAGAGCCTCGAAGAGCTATGGAA
GGCCGTTTACGGCGATGGGAAGGTTAAGTTCGAGCCGAAGATGGCCGAACCCCTCGAAAACTACATCAAAGTTGACTACC
GCATCTACGGTTGCCCACCTGAGAAGAAGGACTTCATCTATGCCATAGGTACCTTCCTCGTTGGTTCTTGGCCAGAGGAC
ATCGATTACCCGGTCTGTCTTGAGTGCAGACTGAAGGGTAACACATGCATTCTCATCGAGAAGGGCGAGCCGTGCCTTGG
CCCGATAACGAGAGCGGGCTGTGACGCAAGATGCCCGAGCTACGGAATAGCATGCATAGGATGTAGAGGGGCGATAGGCT
ACGACGTTGCATGGTTCGACTCACTTGCCAGGACGTTCAAGGAAAAGGGCCTCACCAAGGAAGAAATCCTCGAAAGAATG
AAGATTTTCAACGCACACAATCCAAAGCTGGAGGAGATGGTCGATAAGGTCTTTCAGTTTCAGGGGGTGAAAGAATGA

Upstream 100 bases:

>100_bases
GGAACGAGTACTAGCTGGAAGTACGTCTGCAGAGATGGACCGGTTTTCACGTACTTCGACATAGTATCAACGCCGGGACT
GCTGGACTGAGGTGGTGGAG

Downstream 100 bases:

>100_bases
AGAACCTCTACCTTCCAATCACCGTTGATCACATAGCGCGTGTAGAGGGCAAGGGCGGCGTTGAAATAGTCGTTGGTGAT
GACGGGGTCAAGGAGGTCAA

Product: cytosolic NiFe-hydrogenase, delta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MEGKVRIGFYALTSCYGCQLRFAMMDEILQLLPNAEIVCWYMLDRDSSEDEPVDIAFIEGSVSTEEEVELVKKIRENAKI
VVAVGACATQGGVQSWEKDKSLEELWKAVYGDGKVKFEPKMAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFLVGSWPED
IDYPVCLECRLKGNTCILIEKGEPCLGPITRAGCDARCPSYGIACIGCRGAIGYDVAWFDSLARTFKEKGLTKEEILERM
KIFNAHNPKLEEMVDKVFQFQGVKE

Sequences:

>Translated_265_residues
MEGKVRIGFYALTSCYGCQLRFAMMDEILQLLPNAEIVCWYMLDRDSSEDEPVDIAFIEGSVSTEEEVELVKKIRENAKI
VVAVGACATQGGVQSWEKDKSLEELWKAVYGDGKVKFEPKMAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFLVGSWPED
IDYPVCLECRLKGNTCILIEKGEPCLGPITRAGCDARCPSYGIACIGCRGAIGYDVAWFDSLARTFKEKGLTKEEILERM
KIFNAHNPKLEEMVDKVFQFQGVKE
>Mature_265_residues
MEGKVRIGFYALTSCYGCQLRFAMMDEILQLLPNAEIVCWYMLDRDSSEDEPVDIAFIEGSVSTEEEVELVKKIRENAKI
VVAVGACATQGGVQSWEKDKSLEELWKAVYGDGKVKFEPKMAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFLVGSWPED
IDYPVCLECRLKGNTCILIEKGEPCLGPITRAGCDARCPSYGIACIGCRGAIGYDVAWFDSLARTFKEKGLTKEEILERM
KIFNAHNPKLEEMVDKVFQFQGVKE

Specific function: Unknown

COG id: COG1941

COG function: function code C; Coenzyme F420-reducing hydrogenase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 29898; Mature: 29898

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGKVRIGFYALTSCYGCQLRFAMMDEILQLLPNAEIVCWYMLDRDSSEDEPVDIAFIEG
CCCEEEEHHEEECHHHCCEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEC
SVSTEEEVELVKKIRENAKIVVAVGACATQGGVQSWEKDKSLEELWKAVYGDGKVKFEPK
CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHCCCEEEECCC
MAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFLVGSWPEDIDYPVCLECRLKGNTCILIE
HHHHHHHHEEEEEEEECCCCCCCCCEEEEEHHHHCCCCCCCCCCEEEEEEECCCEEEEEE
KGEPCLGPITRAGCDARCPSYGIACIGCRGAIGYDVAWFDSLARTFKEKGLTKEEILERM
CCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KIFNAHNPKLEEMVDKVFQFQGVKE
HHHCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEGKVRIGFYALTSCYGCQLRFAMMDEILQLLPNAEIVCWYMLDRDSSEDEPVDIAFIEG
CCCEEEEHHEEECHHHCCEEHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEEEEC
SVSTEEEVELVKKIRENAKIVVAVGACATQGGVQSWEKDKSLEELWKAVYGDGKVKFEPK
CCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHCCCEEEECCC
MAEPLENYIKVDYRIYGCPPEKKDFIYAIGTFLVGSWPEDIDYPVCLECRLKGNTCILIE
HHHHHHHHEEEEEEEECCCCCCCCCEEEEEHHHHCCCCCCCCCCEEEEEEECCCEEEEEE
KGEPCLGPITRAGCDARCPSYGIACIGCRGAIGYDVAWFDSLARTFKEKGLTKEEILERM
CCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHH
KIFNAHNPKLEEMVDKVFQFQGVKE
HHHCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]