| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223661
Identifier: 212223661
GI number: 212223661
Start: 471403
End: 471795
Strand: Reverse
Name: 212223661
Synonym: TON_0513
Alternate gene names: NA
Gene position: 471795-471403 (Counterclockwise)
Preceding gene: 212223662
Following gene: 212223660
Centisome position: 25.54
GC content: 52.42
Gene sequence:
>393_bases ATGAAACTCAAGGGCAGAAAGATCGTCGGTGGCAAGGCTGAGGGAGAACTGATAGTCTCGCAGAAGCCCCTTTCATTCCT CGGCGGCGTTGACCCCAATACAGGAATAGTTACCGACGCCGAGAGCGATATAAGGGGCCAGAGCATAGCTGGAAAAGTCC TGGCATTTCCACGTGGTAAGGGATCAACCGTTGGCTCTTACGTTATCTACGCCCTTAAGAAGAACGGAAAGGCGCCGAAG GCAATAATCGTCGGTGAGGCCGAGACAATAGTGGCAACAGGAGCTATAATAGCGGGTATTCCTATGGTTGATGGCATAGA CGTCTCCAAGCTCAAGAGTGGACAGAGGGTCAGGGTCAAAGCCGACGAGGGACTGGTCGAAGTTGAGGAATAG
Upstream 100 bases:
>100_bases CAACAGCGGAAAATCAGCCTTCTACTTCCGGTCCTTTGGCTTCAAGGTTAGGCTCGACGATGCAGAAAACCTCATAAAAG AGGCACCGTGAGGTGAGAAA
Downstream 100 bases:
>100_bases CATTTTTAAGGTCCGTTTCAATTCTTTTTAGGGAGTGCAAAAAATGTCGAGGGGCATCTACGAGTGCATCAACTGTGGAC ATAGGGAGATCCTAGATTCA
Product: protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGKGSTVGSYVIYALKKNGKAPK AIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVKADEGLVEVEE
Sequences:
>Translated_130_residues MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGKGSTVGSYVIYALKKNGKAPK AIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVKADEGLVEVEE >Mature_130_residues MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGKGSTVGSYVIYALKKNGKAPK AIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVKADEGLVEVEE
Specific function: Unknown
COG id: COG1786
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0107 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR002840 - InterPro: IPR008279 - InterPro: IPR012016 - InterPro: IPR020794 [H]
Pfam domain/function: PF01989 DUF126 [H]
EC number: NA
Molecular weight: Translated: 13430; Mature: 13430
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGK CCCCCCEEECCCCCCEEEEECCCHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCC GSTVGSYVIYALKKNGKAPKAIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVK CCCCCEEEEEEEECCCCCCEEEEEECCCEEEECCCEEECCCCCCCCCHHHCCCCCEEEEE ADEGLVEVEE CCCCEEEECC >Mature Secondary Structure MKLKGRKIVGGKAEGELIVSQKPLSFLGGVDPNTGIVTDAESDIRGQSIAGKVLAFPRGK CCCCCCEEECCCCCCEEEEECCCHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCC GSTVGSYVIYALKKNGKAPKAIIVGEAETIVATGAIIAGIPMVDGIDVSKLKSGQRVRVK CCCCCEEEEEEEECCCCCCEEEEEECCCEEEECCCEEECCCCCCCCCHHHCCCCCEEEEE ADEGLVEVEE CCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA