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The map label for this gene is yigC [C]

Identifier: 212223538

GI number: 212223538

Start: 362489

End: 363754

Strand: Reverse

Name: yigC [C]

Synonym: TON_0392

Alternate gene names: 212223538

Gene position: 363754-362489 (Counterclockwise)

Preceding gene: 212223540

Following gene: 212223533

Centisome position: 19.69

GC content: 53.55

Gene sequence:

>1266_bases
ATGCTGAGGGAAATCATCGAGCACTTTAATGATACGGTCGTCATTGATAAGCCCGTCAGCAAGGAGCTTGAGATAACGCG
CTATTTACTAGAATATAAGGACAGACCCGTTCTCTTCAGAAACGTGGACGGCTGGGAAGTTGCAGGAAACATCTGGTCAA
CGAGGGAGAGAATAGCAGGATATCTTGGGATCAGGAAGGAAGAAATTCTTCACCTCATAGCAGATGCCATGGAGAACCCC
CTGCCGTACCAGATGGTCAAGAACGCCCCGTTCATGGAGAGTTCTACCAGAGATTTCTCTCTTAAGGAGCTCCCGATTCC
AAAGTACTACCCGAAGGACGGCGGTCAGTACTTCACCTCGGCCATGGTCATCGCTAAGGACGAGAATGGCTTTGTTAACA
TGTCCTTTCACAGAATGATGGTTATCGACGAGAAGCGCGTCGCGATAAGGCTTGTGCCAAGGCACCTTTATTCGATGTGG
AAGGATAGAGCGGAGCGCGGGGAGGAGCTCGACGTTAGGATAGTCGTCGGCAATCCCATACACCTTCTCCTCGCCGGAGC
AACGAGTGTAGCCTACGGCGTGAGCGAACTCGAGATAGCGTCGGCTATAAGCCAGAGGGCCTTTGGAAAGCCCCTAGAAG
TCACTGAGATTGGTGACATTCCCGTTCCAGTTGAGAGCGAGTTCGTCTTCGAGGCCAAGATACTTCCGGAGCTCACCGAT
GAGGGTCCCTTCGTGGACATAACCGGAACCTACGACTACATAAGGAAGCAGCCCGTAGTGGTCTTCGAGAGAATGCACCA
CATGGAGAATCCAATATTCCACGCCCTCCTGCCTGGCGGCTACGAGCACTACATGCTCATGGGCCTCCCGAAGGAGCCTC
AGATATACGCGAGCGTAAAGAGGGTCGTCCCCAAGGTTCACGGTGTCCGCCTAACGGAGGGTGGGACAATGTGGCTCCAC
GCGGTCGTCAGCATAACCAAGCAACACGATGGCGACGGCAAGAACGCGATTTTAGCGGCATTTGCAGGGCACCCGAGCCT
GAAACACGTCGTCGTTGTGGACGAGGACATCAACATATACGATGACAGGGAAGTTGAGTGGGCGATAGCGACGCGCTTCC
AGGCCGATAAAGATCTTGTGGTAGTGCCCAACGCCCGCGGAAGCTCCCTTGATCCCTCGGCTGAAAAGAGCCTCACCACA
AAGTGGGGAATCGACGCCACAAAGCCGCTTGATAAAAAGGAAGAGTTCGAGAGGGCAAAACTCTGA

Upstream 100 bases:

>100_bases
GCCGTCTGGAATACGAAGTACCACCACGGGCATGGCCAATCGCTGGGAGTTTGGAAAAAGGCTTTATAGACCTTTTGGAA
CAGTAGTCTCAGGTGATAAA

Downstream 100 bases:

>100_bases
TTCTCTATTTTATTTCTGAAGACGGCCAAAATCCCCCTCAAAAAGGAAAAGAAAGTTATTCAATCATCTTGAGAAAGATC
TCCTCGAGGCTGGGTTCCTT

Product: 3-octaprenyl-4-hydroxybenzoate decarboxylyase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MLREIIEHFNDTVVIDKPVSKELEITRYLLEYKDRPVLFRNVDGWEVAGNIWSTRERIAGYLGIRKEEILHLIADAMENP
LPYQMVKNAPFMESSTRDFSLKELPIPKYYPKDGGQYFTSAMVIAKDENGFVNMSFHRMMVIDEKRVAIRLVPRHLYSMW
KDRAERGEELDVRIVVGNPIHLLLAGATSVAYGVSELEIASAISQRAFGKPLEVTEIGDIPVPVESEFVFEAKILPELTD
EGPFVDITGTYDYIRKQPVVVFERMHHMENPIFHALLPGGYEHYMLMGLPKEPQIYASVKRVVPKVHGVRLTEGGTMWLH
AVVSITKQHDGDGKNAILAAFAGHPSLKHVVVVDEDINIYDDREVEWAIATRFQADKDLVVVPNARGSSLDPSAEKSLTT
KWGIDATKPLDKKEEFERAKL

Sequences:

>Translated_421_residues
MLREIIEHFNDTVVIDKPVSKELEITRYLLEYKDRPVLFRNVDGWEVAGNIWSTRERIAGYLGIRKEEILHLIADAMENP
LPYQMVKNAPFMESSTRDFSLKELPIPKYYPKDGGQYFTSAMVIAKDENGFVNMSFHRMMVIDEKRVAIRLVPRHLYSMW
KDRAERGEELDVRIVVGNPIHLLLAGATSVAYGVSELEIASAISQRAFGKPLEVTEIGDIPVPVESEFVFEAKILPELTD
EGPFVDITGTYDYIRKQPVVVFERMHHMENPIFHALLPGGYEHYMLMGLPKEPQIYASVKRVVPKVHGVRLTEGGTMWLH
AVVSITKQHDGDGKNAILAAFAGHPSLKHVVVVDEDINIYDDREVEWAIATRFQADKDLVVVPNARGSSLDPSAEKSLTT
KWGIDATKPLDKKEEFERAKL
>Mature_421_residues
MLREIIEHFNDTVVIDKPVSKELEITRYLLEYKDRPVLFRNVDGWEVAGNIWSTRERIAGYLGIRKEEILHLIADAMENP
LPYQMVKNAPFMESSTRDFSLKELPIPKYYPKDGGQYFTSAMVIAKDENGFVNMSFHRMMVIDEKRVAIRLVPRHLYSMW
KDRAERGEELDVRIVVGNPIHLLLAGATSVAYGVSELEIASAISQRAFGKPLEVTEIGDIPVPVESEFVFEAKILPELTD
EGPFVDITGTYDYIRKQPVVVFERMHHMENPIFHALLPGGYEHYMLMGLPKEPQIYASVKRVVPKVHGVRLTEGGTMWLH
AVVSITKQHDGDGKNAILAAFAGHPSLKHVVVVDEDINIYDDREVEWAIATRFQADKDLVVVPNARGSSLDPSAEKSLTT
KWGIDATKPLDKKEEFERAKL

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=466, Percent_Identity=25.1072961373391, Blast_Score=105, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6320748, Length=471, Percent_Identity=24.416135881104, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 47781; Mature: 47781

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLREIIEHFNDTVVIDKPVSKELEITRYLLEYKDRPVLFRNVDGWEVAGNIWSTRERIAG
CHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCEECCCHHHHHHHHHH
YLGIRKEEILHLIADAMENPLPYQMVKNAPFMESSTRDFSLKELPIPKYYPKDGGQYFTS
HHCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEE
AMVIAKDENGFVNMSFHRMMVIDEKRVAIRLVPRHLYSMWKDRAERGEELDVRIVVGNPI
EEEEEECCCCEEEEEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCE
HLLLAGATSVAYGVSELEIASAISQRAFGKPLEVTEIGDIPVPVESEFVFEAKILPELTD
EEEEECCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCC
EGPFVDITGTYDYIRKQPVVVFERMHHMENPIFHALLPGGYEHYMLMGLPKEPQIYASVK
CCCEEEEECCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCHHHHHHH
RVVPKVHGVRLTEGGTMWLHAVVSITKQHDGDGKNAILAAFAGHPSLKHVVVVDEDINIY
HHHHHHCCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEE
DDREVEWAIATRFQADKDLVVVPNARGSSLDPSAEKSLTTKWGIDATKPLDKKEEFERAK
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHCCCEECCCCCCCCCCHHHHHHHHC
L
C
>Mature Secondary Structure
MLREIIEHFNDTVVIDKPVSKELEITRYLLEYKDRPVLFRNVDGWEVAGNIWSTRERIAG
CHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCEECCCHHHHHHHHHH
YLGIRKEEILHLIADAMENPLPYQMVKNAPFMESSTRDFSLKELPIPKYYPKDGGQYFTS
HHCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEE
AMVIAKDENGFVNMSFHRMMVIDEKRVAIRLVPRHLYSMWKDRAERGEELDVRIVVGNPI
EEEEEECCCCEEEEEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCEEEEEEECCCE
HLLLAGATSVAYGVSELEIASAISQRAFGKPLEVTEIGDIPVPVESEFVFEAKILPELTD
EEEEECCHHHHHCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCC
EGPFVDITGTYDYIRKQPVVVFERMHHMENPIFHALLPGGYEHYMLMGLPKEPQIYASVK
CCCEEEEECCHHHHHCCHHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCCCHHHHHHH
RVVPKVHGVRLTEGGTMWLHAVVSITKQHDGDGKNAILAAFAGHPSLKHVVVVDEDINIY
HHHHHHCCEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEECCCCEE
DDREVEWAIATRFQADKDLVVVPNARGSSLDPSAEKSLTTKWGIDATKPLDKKEEFERAK
CCCCEEEEEEEEECCCCCEEEEECCCCCCCCCCHHHCCCEECCCCCCCCCCHHHHHHHHC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]