| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223455
Identifier: 212223455
GI number: 212223455
Start: 278165
End: 279202
Strand: Reverse
Name: 212223455
Synonym: TON_0309
Alternate gene names: NA
Gene position: 279202-278165 (Counterclockwise)
Preceding gene: 212223462
Following gene: 212223454
Centisome position: 15.11
GC content: 45.28
Gene sequence:
>1038_bases GTGAGGGGGTTAAAAATCTTTAGCCTCGCCTTTTTCAGTTATCTCCTCATCTCCCTCTATTCCAACTACTTTGACGGCGA GTTAAGAGAGCTAATTTATGCTAAAGGTCTTTCTCCTTCGATGCTACTGTTGGGCGTGGTTTATGCTCTGGCGTTCTTTG CAGTATTTGCCCTCGGATATTCAACCAGATTCAAGGTAAATCCTTGGTTCTACGCTCTGGGAATATTTGTGCTTTCATTC CTCGAATATCCCCTCGGCCCGCTGTTGGCCACCTTGCTCATTGTGGCTTATTATCTCCGTATCAATGTGTACAACAGATT TGCAGTTCATGCCTTGGTCATTGCCCTTCTTATCCCGATTGGTCTTTATCTGGTCGTGGGTGTTCCTCTATTTGAAAAAC ACCTGAGGTATGAGCTGGTTGGACCACTTGTCTTTTCTGCGCTTTTGGGAGCCCTCAGTATTGTGTATACAGACACCAGC ACCAAAGTGAAGACTCTACTATTCCTGATCTTTACCTTCATCTTCTTCCTCGGAACGTTCCGCTCCCTTATAGTGCTGAT GTATCTCGCCTACGTATTTGACATGTACTCCCGCGGGATTTTCAGAGTTGATACAAAAACTCTGGGAAGTGGTCTCCTCT TGGGCCTTTTGGTGATATGGCTCAGCGGTAGCATCGAAGCAATTCTGATTAGGATTGGCTTTACTTTTTTAGTGTTTCAC AACTTGGTTCGTCTTTCCCTTCCGACTGGCATCTTCCATGGGAGTCTGCTATTCAGCGACAATCCTAGACATATGATTGC GGGGCTCTTTGGGGCGAGCGGCAACTACACATATTTCTTTTTCGGACAGGCAATTGCCGATTTTGGATTTTTTGGACTTC TGGAGGCTTATTTGTTAGGTTTTCTCCTGAGGGAAAGCGAGAAAAACACAAAAAGTTTTGCATTTGTGCTTGCCATTATG ATATACGCCCTCGATCCTGGAATCGATGCCTTCCTGCTGATATTCCTTCTGGGGGCACTGCTGTTTCTAAAGGAGTAA
Upstream 100 bases:
>100_bases CGAGGAGCAGTGAAAGGTAACGCTTTTCAGTCCCAGTTTTCATCTCACCGGCACCCCTCAAACCTTTTAAGCTCTCCCTT TAACATTTGTTGGTGGTAAA
Downstream 100 bases:
>100_bases CCGGTGCCGTTCCTATCCGAGTCAAGGTGGATTCTAAGAAGGGTGTCGGAGTCACATCGCTCTGTATCAGTATTAACTTT CTGTTCTACTGAGATTGACA
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGYSTRFKVNPWFYALGIFVLSF LEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPIGLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTS TKVKTLLFLIFTFIFFLGTFRSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLGFLLRESEKNTKSFAFVLAIM IYALDPGIDAFLLIFLLGALLFLKE
Sequences:
>Translated_345_residues MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGYSTRFKVNPWFYALGIFVLSF LEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPIGLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTS TKVKTLLFLIFTFIFFLGTFRSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLGFLLRESEKNTKSFAFVLAIM IYALDPGIDAFLLIFLLGALLFLKE >Mature_345_residues MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGYSTRFKVNPWFYALGIFVLSF LEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPIGLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTS TKVKTLLFLIFTFIFFLGTFRSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLGFLLRESEKNTKSFAFVLAIM IYALDPGIDAFLLIFLLGALLFLKE
Specific function: Unknown
COG id: COG1822
COG function: function code S; Predicted archaeal membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38804; Mature: 38804
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGY CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC STRFKVNPWFYALGIFVLSFLEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPI CCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTSTKVKTLLFLIFTFIFFLGTF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH RSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH HHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLG HHHHHHCCCHHHCCEEEECCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH FLLRESEKNTKSFAFVLAIMIYALDPGIDAFLLIFLLGALLFLKE HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGY CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC STRFKVNPWFYALGIFVLSFLEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPI CCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTSTKVKTLLFLIFTFIFFLGTF HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH RSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH HHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLG HHHHHHCCCHHHCCEEEECCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH FLLRESEKNTKSFAFVLAIMIYALDPGIDAFLLIFLLGALLFLKE HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA