Definition Thermococcus onnurineus NA1, complete genome.
Accession NC_011529
Length 1,847,607

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The map label for this gene is 212223455

Identifier: 212223455

GI number: 212223455

Start: 278165

End: 279202

Strand: Reverse

Name: 212223455

Synonym: TON_0309

Alternate gene names: NA

Gene position: 279202-278165 (Counterclockwise)

Preceding gene: 212223462

Following gene: 212223454

Centisome position: 15.11

GC content: 45.28

Gene sequence:

>1038_bases
GTGAGGGGGTTAAAAATCTTTAGCCTCGCCTTTTTCAGTTATCTCCTCATCTCCCTCTATTCCAACTACTTTGACGGCGA
GTTAAGAGAGCTAATTTATGCTAAAGGTCTTTCTCCTTCGATGCTACTGTTGGGCGTGGTTTATGCTCTGGCGTTCTTTG
CAGTATTTGCCCTCGGATATTCAACCAGATTCAAGGTAAATCCTTGGTTCTACGCTCTGGGAATATTTGTGCTTTCATTC
CTCGAATATCCCCTCGGCCCGCTGTTGGCCACCTTGCTCATTGTGGCTTATTATCTCCGTATCAATGTGTACAACAGATT
TGCAGTTCATGCCTTGGTCATTGCCCTTCTTATCCCGATTGGTCTTTATCTGGTCGTGGGTGTTCCTCTATTTGAAAAAC
ACCTGAGGTATGAGCTGGTTGGACCACTTGTCTTTTCTGCGCTTTTGGGAGCCCTCAGTATTGTGTATACAGACACCAGC
ACCAAAGTGAAGACTCTACTATTCCTGATCTTTACCTTCATCTTCTTCCTCGGAACGTTCCGCTCCCTTATAGTGCTGAT
GTATCTCGCCTACGTATTTGACATGTACTCCCGCGGGATTTTCAGAGTTGATACAAAAACTCTGGGAAGTGGTCTCCTCT
TGGGCCTTTTGGTGATATGGCTCAGCGGTAGCATCGAAGCAATTCTGATTAGGATTGGCTTTACTTTTTTAGTGTTTCAC
AACTTGGTTCGTCTTTCCCTTCCGACTGGCATCTTCCATGGGAGTCTGCTATTCAGCGACAATCCTAGACATATGATTGC
GGGGCTCTTTGGGGCGAGCGGCAACTACACATATTTCTTTTTCGGACAGGCAATTGCCGATTTTGGATTTTTTGGACTTC
TGGAGGCTTATTTGTTAGGTTTTCTCCTGAGGGAAAGCGAGAAAAACACAAAAAGTTTTGCATTTGTGCTTGCCATTATG
ATATACGCCCTCGATCCTGGAATCGATGCCTTCCTGCTGATATTCCTTCTGGGGGCACTGCTGTTTCTAAAGGAGTAA

Upstream 100 bases:

>100_bases
CGAGGAGCAGTGAAAGGTAACGCTTTTCAGTCCCAGTTTTCATCTCACCGGCACCCCTCAAACCTTTTAAGCTCTCCCTT
TAACATTTGTTGGTGGTAAA

Downstream 100 bases:

>100_bases
CCGGTGCCGTTCCTATCCGAGTCAAGGTGGATTCTAAGAAGGGTGTCGGAGTCACATCGCTCTGTATCAGTATTAACTTT
CTGTTCTACTGAGATTGACA

Product: membrane protein, conserved

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGYSTRFKVNPWFYALGIFVLSF
LEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPIGLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTS
TKVKTLLFLIFTFIFFLGTFRSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH
NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLGFLLRESEKNTKSFAFVLAIM
IYALDPGIDAFLLIFLLGALLFLKE

Sequences:

>Translated_345_residues
MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGYSTRFKVNPWFYALGIFVLSF
LEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPIGLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTS
TKVKTLLFLIFTFIFFLGTFRSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH
NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLGFLLRESEKNTKSFAFVLAIM
IYALDPGIDAFLLIFLLGALLFLKE
>Mature_345_residues
MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGYSTRFKVNPWFYALGIFVLSF
LEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPIGLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTS
TKVKTLLFLIFTFIFFLGTFRSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH
NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLGFLLRESEKNTKSFAFVLAIM
IYALDPGIDAFLLIFLLGALLFLKE

Specific function: Unknown

COG id: COG1822

COG function: function code S; Predicted archaeal membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38804; Mature: 38804

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGY
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
STRFKVNPWFYALGIFVLSFLEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPI
CCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTSTKVKTLLFLIFTFIFFLGTF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH
HHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLG
HHHHHHCCCHHHCCEEEECCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
FLLRESEKNTKSFAFVLAIMIYALDPGIDAFLLIFLLGALLFLKE
HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRGLKIFSLAFFSYLLISLYSNYFDGELRELIYAKGLSPSMLLLGVVYALAFFAVFALGY
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC
STRFKVNPWFYALGIFVLSFLEYPLGPLLATLLIVAYYLRINVYNRFAVHALVIALLIPI
CCEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLYLVVGVPLFEKHLRYELVGPLVFSALLGALSIVYTDTSTKVKTLLFLIFTFIFFLGTF
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RSLIVLMYLAYVFDMYSRGIFRVDTKTLGSGLLLGLLVIWLSGSIEAILIRIGFTFLVFH
HHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NLVRLSLPTGIFHGSLLFSDNPRHMIAGLFGASGNYTYFFFGQAIADFGFFGLLEAYLLG
HHHHHHCCCHHHCCEEEECCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHH
FLLRESEKNTKSFAFVLAIMIYALDPGIDAFLLIFLLGALLFLKE
HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA