| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223437
Identifier: 212223437
GI number: 212223437
Start: 259183
End: 260628
Strand: Reverse
Name: 212223437
Synonym: TON_0291
Alternate gene names: NA
Gene position: 260628-259183 (Counterclockwise)
Preceding gene: 212223438
Following gene: 212223436
Centisome position: 14.11
GC content: 50.48
Gene sequence:
>1446_bases ATGTGCGAGTATACCTACGAAAACGGTAAAAAGTGCAGGTTGAAATCCCTTGAAGGCTCTAAGTACTGCGCCCTCCATAT CTCCTACGACGAGGGCGAACGCCTGTTCGGGGAGGATATAAAGCGCATCAAAGAGGAAGCCTTTCTCAAGAGGTTGAAGG AGGGTCAGACATACTTTGAGAGTGTCTACCTGTATGAAGCTAAAATAAGTAATTTCCGGGCTGAAAAACCGATAGTCTTC AAAAACTCGCGGATTAAGACAATCCTATTTGACGACGTCACAGTTCCGGGAATTACTTTCTACAACTCCTACGCAGGTAG AATAGTCGTCTTTGAGAGTAAGGTCGGAACGCTCCTTGTCCATAGTTCCAATGTCTTTGGCCTCAACATCCTCCGCGTAA AGTTCTCGAACTCGATGTATGTCAGGAACTCGAGTGTCAGGTATCTAATGATTAATTCGACAGAGTACGTTGGAAAGGCT GAGAAGAGTGAGGAGGAATACGGTGAGAGAAAGACGGCAACGGGCAGGATAGAGCTTAGCAATCTGGATAACATTCGCAG AATAGGTGTGAACGTCAGGTATCCACTTATGAGGCGTATCCTCGAGGAGCATGGCATAACGCCCTCTGGCTCGTCGGAGA GGAGTGTAAAGGCAACGGTACTCGCCTTCAGGAACGTCAGGTTTGACCAATCCGCGCGCTTTAAGAGGCAGGTCAGGCTG AGCGTGAGACACTTCCACGGCCAGCTCGTCCTTGAAAACCTCAACGTCTTTGGTCACGCTGAAATTCTTGGCGGCAGGAT AAAGTCCCCCGAGTTCGTTCACGTCACCGTGATGGGTAACTTCATTTTCAGAAGGGTTGGCTTCTACGGCGATGCCACCT GGAACGTGACGGTTCTGCCCCACCTTCCCCTCGAGCTAAGCGTTCAAGGCTTCGTCGTCGTTGAGGACTGCCGCTTCAGC AACCCAAGGATGGCGGAGATATTCTACAGGATAGCAAGAACTAGCTGGGAACGGAACGGTGATCTAGAGCGTGCCGATGA GTACTATTACAAAGAAATGGTTTCCAGAAGGCAGTCTCGCCTCACAGCGAGGGTGAGGGGAATTAAGAAGGTCCTGCTGA AGCTGGAAGCGACCTTTGAATGGCTCTTCGCCGATTTGACATGCAAGTACGGAATGGACTGGAAAAGGCCGATACTGATA TGGCTCGCGGCCGTTAACGTCTTCTTCCCACTCCTCTTCTTCTTAACCCAGAGCGTGGAAGGCGTTTCAGGTAACATGGG GTTCCTTGACTATGAGTACTTCAGCGTTGTGACCGCCACCACTCTTGGCTATGGCGACTACCATCCAGTGGGAGTGGGCA GGATTATAGCGTCTGTCGAGGCGCTGTTCGGAATGTTCATGTGGGCAGTGTTCCTTACAGTCTTTGCCAGGAAGTACATG AGGTGA
Upstream 100 bases:
>100_bases CTGATAGAGCTGGACTATAACGGGAAGAAGTTCTAGATGAGAACTATGGAAAGCAGGAGAAAACTTAATTAGTTGCCAGA TGAGTTTATTTGGGGGAGCC
Downstream 100 bases:
>100_bases GTCTATGAAAGTTGGACTGATCATTAACCCCATAGCAGGCATGGGAGGCAGGGTTGCCCTGAAGGGCACCGACGGAGTCG TTGAGGAAGCGATTAAGCGC
Product: membrane protein, conserved
Products: NA
Alternate protein names: Ion Transport 2 Domain Protein; Ion Channel Family Protein; Voltage-Gated Potassium Channel; Low-Complexity Protein; Pentapeptide Repeat Protein
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MCEYTYENGKKCRLKSLEGSKYCALHISYDEGERLFGEDIKRIKEEAFLKRLKEGQTYFESVYLYEAKISNFRAEKPIVF KNSRIKTILFDDVTVPGITFYNSYAGRIVVFESKVGTLLVHSSNVFGLNILRVKFSNSMYVRNSSVRYLMINSTEYVGKA EKSEEEYGERKTATGRIELSNLDNIRRIGVNVRYPLMRRILEEHGITPSGSSERSVKATVLAFRNVRFDQSARFKRQVRL SVRHFHGQLVLENLNVFGHAEILGGRIKSPEFVHVTVMGNFIFRRVGFYGDATWNVTVLPHLPLELSVQGFVVVEDCRFS NPRMAEIFYRIARTSWERNGDLERADEYYYKEMVSRRQSRLTARVRGIKKVLLKLEATFEWLFADLTCKYGMDWKRPILI WLAAVNVFFPLLFFLTQSVEGVSGNMGFLDYEYFSVVTATTLGYGDYHPVGVGRIIASVEALFGMFMWAVFLTVFARKYM R
Sequences:
>Translated_481_residues MCEYTYENGKKCRLKSLEGSKYCALHISYDEGERLFGEDIKRIKEEAFLKRLKEGQTYFESVYLYEAKISNFRAEKPIVF KNSRIKTILFDDVTVPGITFYNSYAGRIVVFESKVGTLLVHSSNVFGLNILRVKFSNSMYVRNSSVRYLMINSTEYVGKA EKSEEEYGERKTATGRIELSNLDNIRRIGVNVRYPLMRRILEEHGITPSGSSERSVKATVLAFRNVRFDQSARFKRQVRL SVRHFHGQLVLENLNVFGHAEILGGRIKSPEFVHVTVMGNFIFRRVGFYGDATWNVTVLPHLPLELSVQGFVVVEDCRFS NPRMAEIFYRIARTSWERNGDLERADEYYYKEMVSRRQSRLTARVRGIKKVLLKLEATFEWLFADLTCKYGMDWKRPILI WLAAVNVFFPLLFFLTQSVEGVSGNMGFLDYEYFSVVTATTLGYGDYHPVGVGRIIASVEALFGMFMWAVFLTVFARKYM R >Mature_481_residues MCEYTYENGKKCRLKSLEGSKYCALHISYDEGERLFGEDIKRIKEEAFLKRLKEGQTYFESVYLYEAKISNFRAEKPIVF KNSRIKTILFDDVTVPGITFYNSYAGRIVVFESKVGTLLVHSSNVFGLNILRVKFSNSMYVRNSSVRYLMINSTEYVGKA EKSEEEYGERKTATGRIELSNLDNIRRIGVNVRYPLMRRILEEHGITPSGSSERSVKATVLAFRNVRFDQSARFKRQVRL SVRHFHGQLVLENLNVFGHAEILGGRIKSPEFVHVTVMGNFIFRRVGFYGDATWNVTVLPHLPLELSVQGFVVVEDCRFS NPRMAEIFYRIARTSWERNGDLERADEYYYKEMVSRRQSRLTARVRGIKKVLLKLEATFEWLFADLTCKYGMDWKRPILI WLAAVNVFFPLLFFLTQSVEGVSGNMGFLDYEYFSVVTATTLGYGDYHPVGVGRIIASVEALFGMFMWAVFLTVFARKYM R
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55727; Mature: 55727
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCEYTYENGKKCRLKSLEGSKYCALHISYDEGERLFGEDIKRIKEEAFLKRLKEGQTYFE CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH SVYLYEAKISNFRAEKPIVFKNSRIKTILFDDVTVPGITFYNSYAGRIVVFESKVGTLLV HEEEEEEHHCCCCCCCCEEEECCCEEEEEEECCCCCCEEEECCCCCEEEEEECCCCEEEE HSSNVFGLNILRVKFSNSMYVRNSSVRYLMINSTEYVGKAEKSEEEYGERKTATGRIELS ECCCEEEEEEEEEEECCEEEEECCCEEEEEEECCHHCCCCCCCHHHHCCCCCCCCEEEEC NLDNIRRIGVNVRYPLMRRILEEHGITPSGSSERSVKATVLAFRNVRFDQSARFKRQVRL CCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHEEEEEHHCCCCCCHHHHHHHHHH SVRHFHGQLVLENLNVFGHAEILGGRIKSPEFVHVTVMGNFIFRRVGFYGDATWNVTVLP HHHHHCCEEEEECCCCEEEHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCCCCEEEEEEEE HLPLELSVQGFVVVEDCRFSNPRMAEIFYRIARTSWERNGDLERADEYYYKEMVSRRQSR CCCEEEEECEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LTARVRGIKKVLLKLEATFEWLFADLTCKYGMDWKRPILIWLAAVNVFFPLLFFLTQSVE HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GVSGNMGFLDYEYFSVVTATTLGYGDYHPVGVGRIIASVEALFGMFMWAVFLTVFARKYM CCCCCCCEEEHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure MCEYTYENGKKCRLKSLEGSKYCALHISYDEGERLFGEDIKRIKEEAFLKRLKEGQTYFE CCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHH SVYLYEAKISNFRAEKPIVFKNSRIKTILFDDVTVPGITFYNSYAGRIVVFESKVGTLLV HEEEEEEHHCCCCCCCCEEEECCCEEEEEEECCCCCCEEEECCCCCEEEEEECCCCEEEE HSSNVFGLNILRVKFSNSMYVRNSSVRYLMINSTEYVGKAEKSEEEYGERKTATGRIELS ECCCEEEEEEEEEEECCEEEEECCCEEEEEEECCHHCCCCCCCHHHHCCCCCCCCEEEEC NLDNIRRIGVNVRYPLMRRILEEHGITPSGSSERSVKATVLAFRNVRFDQSARFKRQVRL CCCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHEEEEEHHCCCCCCHHHHHHHHHH SVRHFHGQLVLENLNVFGHAEILGGRIKSPEFVHVTVMGNFIFRRVGFYGDATWNVTVLP HHHHHCCEEEEECCCCEEEHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCCCCEEEEEEEE HLPLELSVQGFVVVEDCRFSNPRMAEIFYRIARTSWERNGDLERADEYYYKEMVSRRQSR CCCEEEEECEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LTARVRGIKKVLLKLEATFEWLFADLTCKYGMDWKRPILIWLAAVNVFFPLLFFLTQSVE HHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC GVSGNMGFLDYEYFSVVTATTLGYGDYHPVGVGRIIASVEALFGMFMWAVFLTVFARKYM CCCCCCCEEEHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA