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The map label for this gene is uidR [C]

Identifier: 212223428

GI number: 212223428

Start: 250786

End: 251337

Strand: Reverse

Name: uidR [C]

Synonym: TON_0282

Alternate gene names: 212223428

Gene position: 251337-250786 (Counterclockwise)

Preceding gene: 212223436

Following gene: 212223427

Centisome position: 13.6

GC content: 41.67

Gene sequence:

>552_bases
ATGGACACTAAGGAACGGATATTGAAAGCTGCAGAAGAACTCTTTGCCGAGAAGGGCTACGATAAGACCACTGTTGATGA
AATCGTTGAGAAAGCTAGAGTTGCTAAGGGCACTTTCTACAACTACTTTAAGAGTAAAGAGGAATTGATAAAAATCGTTG
CTCTCCAGTCTCTGCCGTACTCAGCAATACGAGAGGAGCTTGAAAAAGAGCATGAGAACCTCGCTGATTTTCTGCACAGT
ATTGCAAAGGCGTACATCGTATATTACTGCGATCCTGTTCTGAGATCCCTGTTTTTCTACACACTAGCTGTTAAGGGTAA
GATAAGAGAGGTTGAGGAAATTCACAGGAAATTCTGCACAGAGGCGATTTCCAAAGGTGCCAAGAAGATATCACAGCTCG
CAAACGTGGATGAAAAAACTGCCATGGTTGTTTTTAAGGCGTTTTATGGAGCCTTATTTTCGAGACTTGTTTTTGCTGAG
TATTCGTGTACCCCTGATGTTGATTATGTTTCGGAACTCATCCAGCTTATAGAGAAAAGCTTGAAAAACTAG

Upstream 100 bases:

>100_bases
ATGATTATTCTATTGAGTGAATTGAATTATTTAAATTGCCGTAACTTTTTTATATAACGCCAATGACCTCGCAGTCAGTA
CTATACGGGGAGTGCTGGGG

Downstream 100 bases:

>100_bases
CACTTTTTATGAATAATTTTTTAGATATTTCGCTTGTTATTGAACTATTTTATGCATCCCAATGGAAGTGCGAACGAAAG
TAAATACAATATATCGCTTG

Product: putative transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDTKERILKAAEELFAEKGYDKTTVDEIVEKARVAKGTFYNYFKSKEELIKIVALQSLPYSAIREELEKEHENLADFLHS
IAKAYIVYYCDPVLRSLFFYTLAVKGKIREVEEIHRKFCTEAISKGAKKISQLANVDEKTAMVVFKAFYGALFSRLVFAE
YSCTPDVDYVSELIQLIEKSLKN

Sequences:

>Translated_183_residues
MDTKERILKAAEELFAEKGYDKTTVDEIVEKARVAKGTFYNYFKSKEELIKIVALQSLPYSAIREELEKEHENLADFLHS
IAKAYIVYYCDPVLRSLFFYTLAVKGKIREVEEIHRKFCTEAISKGAKKISQLANVDEKTAMVVFKAFYGALFSRLVFAE
YSCTPDVDYVSELIQLIEKSLKN
>Mature_183_residues
MDTKERILKAAEELFAEKGYDKTTVDEIVEKARVAKGTFYNYFKSKEELIKIVALQSLPYSAIREELEKEHENLADFLHS
IAKAYIVYYCDPVLRSLFFYTLAVKGKIREVEEIHRKFCTEAISKGAKKISQLANVDEKTAMVVFKAFYGALFSRLVFAE
YSCTPDVDYVSELIQLIEKSLKN

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21079; Mature: 21079

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTKERILKAAEELFAEKGYDKTTVDEIVEKARVAKGTFYNYFKSKEELIKIVALQSLPY
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SAIREELEKEHENLADFLHSIAKAYIVYYCDPVLRSLFFYTLAVKGKIREVEEIHRKFCT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAISKGAKKISQLANVDEKTAMVVFKAFYGALFSRLVFAEYSCTPDVDYVSELIQLIEKS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LKN
HCC
>Mature Secondary Structure
MDTKERILKAAEELFAEKGYDKTTVDEIVEKARVAKGTFYNYFKSKEELIKIVALQSLPY
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
SAIREELEKEHENLADFLHSIAKAYIVYYCDPVLRSLFFYTLAVKGKIREVEEIHRKFCT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAISKGAKKISQLANVDEKTAMVVFKAFYGALFSRLVFAEYSCTPDVDYVSELIQLIEKS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LKN
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA