| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223336
Identifier: 212223336
GI number: 212223336
Start: 165961
End: 167247
Strand: Reverse
Name: 212223336
Synonym: TON_0190
Alternate gene names: NA
Gene position: 167247-165961 (Counterclockwise)
Preceding gene: 212223337
Following gene: 212223329
Centisome position: 9.05
GC content: 49.73
Gene sequence:
>1287_bases ATGGATGAAATTAAGAAGTGGACAATATACCTGATATTCCTTGTTGCCGGATTCGCCACTGGAGCAGGTAGCATCGGTCT ATTCCCGCAGTTCTGGCTCCAGTACGGTTTGACTGGAATGGTTGTGCACTTAGTATTCCTTGCAATACTAACGTATGTCG CAATACTCGAGGCTGAGACCGTCATGAAATCCGGCTACTACTTCGTTGAACTCTACAACAAAGTCTCAAAACGGCCCGCT ATGGTGCTCTCAATCTTCGCTGCCATTGCAATGTTCCTCTCGTACTACACCGCCAACACCATGCTGACCGTTCTCTCACC GGTTCTTGGAACAGGAACCGTCGCCAGGCTCATAGCCAAGATACTGATGTTTGCTATAGCCTTCGTTATCCTCACTAGGG CTAAAGAGAAGACCTTCGCAATCATGGCGATAGGTTCTGTGATATTTGTCGTCGCGGTTACAATAACTACGGTTGCGTTC AAGGTACAGATATCTGAGGGTGCCACCTACCTGGCAATGGCCAAGCACATGCTCGTTGCAAGGCACCCAATAACACTTGA CCTCATAAAAGCTGCCGCTGAAAGGGCAATCTACGGTGTTGGACTTGGATTTGCATTCTACTTGATGCTCGGAAGCTTTA TCAACGAGCGCTTCAACGCGAAGGTAATCATTGGGGTTGGAATCCTGGTTCAGCTTTTCATCGGGATTCTATCAACGATA ACTGTTGTCTATGCAATTGCTCCCACCACCCCTGACAGGCTTCTCCAGTATGTCCATGGTGGTGAAGAAGGTGCTATTCA GCTCATGGGCGAACTGCCACACATCCTTGCGGACTATCCGACGCTGATACTCCTCATAGGAATCTCTGCGTTCTTTGCAG GTATCACCAGTCTGCTGCCAACTGCGGAGATCGGTCTCCAGATAGTTGAATCAACCCTTAGGGTGAGCAGGAATAAAGCT GCTGCCTATCTTGTAGCTGTGGCCCTTGCAATAGGCGTAATAGACTCCTCTCCATCAACAGCAGACATGGTGCTCAAAGC AGTGAGTGTGACAACGTTCTTCACGGCAATTTTTGAGCTCTATCCAGTGCTGGCTTCCAAGGAAAAACCATCAACTTCAG CCCTCGCAATGGCTGGAATAGCAGCGGTGCTGTTCCTCGTTGGTGGTCTCTACGCCCTATTTGCAGTCTTCAGGGCTGGC GGCGTCTACGTTGTCTCGGGAATCATTGCCGCGGTAGTGATTCTGTTCGGTCTCTTCGGCGACAAACTTGTGCCCGAAAA GGCCTGA
Upstream 100 bases:
>100_bases CCATAAACTAGAAGTAAGAACTTTTAGACGTTCCTCGTGGGAAGTCATATTTTTAACCTCAAACGTCCATTGTGGGATAT ACAAACCAGGGGGTGAAACC
Downstream 100 bases:
>100_bases ATAGGCCCCATATCCTTATTTTTGTTTTGCCATGGAAAATAAAAGAAGAGGTCACTTGTGGGCGAATATCGCCACCACTT TCTCGGGTGTCACATCATCT
Product: membrane protein, conserved
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAETVMKSGYYFVELYNKVSKRPA MVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAKILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAF KVQISEGATYLAMAKHMLVARHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLPTAEIGLQIVESTLRVSRNKA AAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFELYPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAG GVYVVSGIIAAVVILFGLFGDKLVPEKA
Sequences:
>Translated_428_residues MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAETVMKSGYYFVELYNKVSKRPA MVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAKILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAF KVQISEGATYLAMAKHMLVARHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLPTAEIGLQIVESTLRVSRNKA AAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFELYPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAG GVYVVSGIIAAVVILFGLFGDKLVPEKA >Mature_428_residues MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAETVMKSGYYFVELYNKVSKRPA MVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAKILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAF KVQISEGATYLAMAKHMLVARHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLPTAEIGLQIVESTLRVSRNKA AAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFELYPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAG GVYVVSGIIAAVVILFGLFGDKLVPEKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45778; Mature: 45778
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAET CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VMKSGYYFVELYNKVSKRPAMVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAK HHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAFKVQISEGATYLAMAKHMLVA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH RHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLP HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TAEIGLQIVESTLRVSRNKAAAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAGGVYVVSGIIAAVVILFGLFG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DKLVPEKA CCCCCCCC >Mature Secondary Structure MDEIKKWTIYLIFLVAGFATGAGSIGLFPQFWLQYGLTGMVVHLVFLAILTYVAILEAET CCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH VMKSGYYFVELYNKVSKRPAMVLSIFAAIAMFLSYYTANTMLTVLSPVLGTGTVARLIAK HHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ILMFAIAFVILTRAKEKTFAIMAIGSVIFVVAVTITTVAFKVQISEGATYLAMAKHMLVA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHH RHPITLDLIKAAAERAIYGVGLGFAFYLMLGSFINERFNAKVIIGVGILVQLFIGILSTI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH TVVYAIAPTTPDRLLQYVHGGEEGAIQLMGELPHILADYPTLILLIGISAFFAGITSLLP HHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC TAEIGLQIVESTLRVSRNKAAAYLVAVALAIGVIDSSPSTADMVLKAVSVTTFFTAIFEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YPVLASKEKPSTSALAMAGIAAVLFLVGGLYALFAVFRAGGVYVVSGIIAAVVILFGLFG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC DKLVPEKA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA