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The map label for this gene is asrB [H]

Identifier: 212223199

GI number: 212223199

Start: 48772

End: 49647

Strand: Reverse

Name: asrB [H]

Synonym: TON_0054

Alternate gene names: 212223199

Gene position: 49647-48772 (Counterclockwise)

Preceding gene: 212223200

Following gene: 212223198

Centisome position: 2.69

GC content: 56.85

Gene sequence:

>876_bases
ATGAGCGAGAATCCACATCAAACTTACGATGCGCGCATTCTGGAAGTGAAGGACCTAACACCCAGGGAGAAGCTCTTCAC
GCTCCGCTTCTTAGACCCGGAAATTGGCGAACACTTCACATTCAAGCCCGGCCAGTTCGTCATCGTCGATATACGGGGCT
TCGGTGAGTTCCCCATAAGCCTCTGCTCCTCACCAACGAGAAAAGGATACATTCAGCTCTGCATCAGAAAAGCCGGAAGG
ATGACCAAGTTCATCCATCAGATGAAAGAGGGAGAAGTGGTGGGCATCCGCGGGCCCTACGGCAACGGCTTCCCGATGGA
GAAAATGGAGGGCTCGAATCTACTCCTGGTCGCCGGTGGACTCGGTATGGCACCCCTCCGCTCGGTTCTCTGGTACGCGA
TAGACACCGGAAAGTACGAGCACGTCTGGCTCCTCTACGGCACCAAAGCCTACGAGGACATACTCTTCCGCGACGAGATA
ATCCACCTGCTGAAGCACGGCGACGCGGTTGGCTGCAGCGTAAAGCTCGCCTATGAGGTCGAAAGCCCCTCGTGCATCTA
CCTCGAGCGGGGCTTCTTCGACAGGGTGTGCAAGGGTGTCGTTACCGACCTCTTCCGCGGGGAGGAGTTCGACGTCGACA
AGGCTTACGCCCTCATCTGTGGGCCGCCGGTTATGTACCGCTTCGTCATCAAGGAGCTCCTAGACAGGAAACTCTCGCCG
GGCAGGATATACATGACCCTCGAGAGGCGCATGCGCTGCGGAATAGGCAAGTGCGGCCACTGTATAGTGGGAACGAGCAC
CTCCATAAAGTACGTCTGCAAGGACGGCCCCGTCTTCACATACTGGGATGCTCTCTCCACGAGGGGGTTGATATGA

Upstream 100 bases:

>100_bases
CCTCGGGTTATAACTGCGTAGGTTGTGGAAGGTGTGACGAGTTCTGCCCGGCGAAGATAGAGCACGTCAAGGTTCTTGAG
GAGGTCAGGGGGTCGCTGAG

Downstream 100 bases:

>100_bases
TGGACAAGCTCAAGTTGGCCGTCTTCGAGCTTACCGACTGCGGCGGCTGTGCGCTGAATATTCTCTTCCTCTACGAGAAG
CTGTTTGACCTGCTCGAGTT

Product: cytochrome-c3 hydrogenase subunit gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MSENPHQTYDARILEVKDLTPREKLFTLRFLDPEIGEHFTFKPGQFVIVDIRGFGEFPISLCSSPTRKGYIQLCIRKAGR
MTKFIHQMKEGEVVGIRGPYGNGFPMEKMEGSNLLLVAGGLGMAPLRSVLWYAIDTGKYEHVWLLYGTKAYEDILFRDEI
IHLLKHGDAVGCSVKLAYEVESPSCIYLERGFFDRVCKGVVTDLFRGEEFDVDKAYALICGPPVMYRFVIKELLDRKLSP
GRIYMTLERRMRCGIGKCGHCIVGTSTSIKYVCKDGPVFTYWDALSTRGLI

Sequences:

>Translated_291_residues
MSENPHQTYDARILEVKDLTPREKLFTLRFLDPEIGEHFTFKPGQFVIVDIRGFGEFPISLCSSPTRKGYIQLCIRKAGR
MTKFIHQMKEGEVVGIRGPYGNGFPMEKMEGSNLLLVAGGLGMAPLRSVLWYAIDTGKYEHVWLLYGTKAYEDILFRDEI
IHLLKHGDAVGCSVKLAYEVESPSCIYLERGFFDRVCKGVVTDLFRGEEFDVDKAYALICGPPVMYRFVIKELLDRKLSP
GRIYMTLERRMRCGIGKCGHCIVGTSTSIKYVCKDGPVFTYWDALSTRGLI
>Mature_290_residues
SENPHQTYDARILEVKDLTPREKLFTLRFLDPEIGEHFTFKPGQFVIVDIRGFGEFPISLCSSPTRKGYIQLCIRKAGRM
TKFIHQMKEGEVVGIRGPYGNGFPMEKMEGSNLLLVAGGLGMAPLRSVLWYAIDTGKYEHVWLLYGTKAYEDILFRDEII
HLLKHGDAVGCSVKLAYEVESPSCIYLERGFFDRVCKGVVTDLFRGEEFDVDKAYALICGPPVMYRFVIKELLDRKLSPG
RIYMTLERRMRCGIGKCGHCIVGTSTSIKYVCKDGPVFTYWDALSTRGLI

Specific function: This enzyme catalyzes the hydrogen sulfide production from sulfite. It is strictly anaerobic. It is regulated by electron acceptors rather than by cysteine [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938
- InterPro:   IPR014260 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33039; Mature: 32908

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENPHQTYDARILEVKDLTPREKLFTLRFLDPEIGEHFTFKPGQFVIVDIRGFGEFPIS
CCCCCCCCCCEEEEEEECCCCHHHEEEEEECCCCCCCCEEECCCCEEEEEECCCCCCCHH
LCSSPTRKGYIQLCIRKAGRMTKFIHQMKEGEVVGIRGPYGNGFPMEKMEGSNLLLVAGG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCEEEEECC
LGMAPLRSVLWYAIDTGKYEHVWLLYGTKAYEDILFRDEIIHLLKHGDAVGCSVKLAYEV
CCHHHHHHHHEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
ESPSCIYLERGFFDRVCKGVVTDLFRGEEFDVDKAYALICGPPVMYRFVIKELLDRKLSP
CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCC
GRIYMTLERRMRCGIGKCGHCIVGTSTSIKYVCKDGPVFTYWDALSTRGLI
CEEEEEEEHHHHCCCCCCCCEEEECCCCEEEEECCCCEEEEEHHHHCCCCC
>Mature Secondary Structure 
SENPHQTYDARILEVKDLTPREKLFTLRFLDPEIGEHFTFKPGQFVIVDIRGFGEFPIS
CCCCCCCCCEEEEEEECCCCHHHEEEEEECCCCCCCCEEECCCCEEEEEECCCCCCCHH
LCSSPTRKGYIQLCIRKAGRMTKFIHQMKEGEVVGIRGPYGNGFPMEKMEGSNLLLVAGG
HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHCCCCCEEEEECC
LGMAPLRSVLWYAIDTGKYEHVWLLYGTKAYEDILFRDEIIHLLKHGDAVGCSVKLAYEV
CCHHHHHHHHEEEECCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEE
ESPSCIYLERGFFDRVCKGVVTDLFRGEEFDVDKAYALICGPPVMYRFVIKELLDRKLSP
CCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCC
GRIYMTLERRMRCGIGKCGHCIVGTSTSIKYVCKDGPVFTYWDALSTRGLI
CEEEEEEEHHHHCCCCCCCCEEEECCCCEEEEECCCCEEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1704886; 11677609 [H]