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The map label for this gene is vhuG [H]

Identifier: 212223198

GI number: 212223198

Start: 48035

End: 48775

Strand: Reverse

Name: vhuG [H]

Synonym: TON_0053

Alternate gene names: 212223198

Gene position: 48775-48035 (Counterclockwise)

Preceding gene: 212223199

Following gene: 212223197

Centisome position: 2.64

GC content: 57.09

Gene sequence:

>741_bases
ATGATGGACAAGCTCAAGTTGGCCGTCTTCGAGCTTACCGACTGCGGCGGCTGTGCGCTGAATATTCTCTTCCTCTACGA
GAAGCTGTTTGACCTGCTCGAGTTCTACGAGATAACGGAGTTCCACATGGCGACCAGCCTAAGCGAGGGGAGCCACTACG
ACGTGGCCCTCGTAACCGGAACGGTCTCAAGCCAGCGCGACCTAGCGCTCCTCAAGGAGGCAAGAAACCACTCCGACTAC
CTCATAGCCCTCGGAACCTGCGCAACGCACGGCTCGGTTCAGGCTAGCGTCGAGGGGAGCATAAGGGAGAAGCTGAAGAG
GGTCTATGGAGATGAGGGCAACCCGATGAGGGCGCTGGACTCGAAGCCCGTCGTTGAGTACGTCGCCGTTGATTTCGCCC
TCCCAGGCTGTCCCTACGACAAAAACGAGGTATATCAGGTTCTGATGGACATTGCCAAAGGCATTGAGCCGGTAAAGAAA
GACTACCCCGTCTGCGTCGAGTGCAAGCTCAACGAATACGAATGTGTTCTCGTGAAGAAGGGCCTCCCCTGCCTCGGTCC
AATAACCTACGGCGGCTGCAACGCTGCTTGTATACGCTCCGGGCTGGGATGCATAGGCTGTCGCGGGCCGTTGCCCGGCG
AGGTGAATCCTGCAAGTGAGTACGAGATACTCAAGGATCTGGGCTACGATGATGACTACATCCTCAGGAAGTTCAAGACC
TTCGCGAGGTGGGAGCCATGA

Upstream 100 bases:

>100_bases
GCGGCCACTGTATAGTGGGAACGAGCACCTCCATAAAGTACGTCTGCAAGGACGGCCCCGTCTTCACATACTGGGATGCT
CTCTCCACGAGGGGGTTGAT

Downstream 100 bases:

>100_bases
TAATCGAGTTGAGGGAGTTCACGAGAGTTGAAGGCAACGGCAAAGCCGAGATAGTTGTCGAGAACGGTGAAGTTAAGGAC
GTCAGGCTCAAAATCGTTGA

Product: Sulfhydrogenase II, delta chain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MMDKLKLAVFELTDCGGCALNILFLYEKLFDLLEFYEITEFHMATSLSEGSHYDVALVTGTVSSQRDLALLKEARNHSDY
LIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALDSKPVVEYVAVDFALPGCPYDKNEVYQVLMDIAKGIEPVKK
DYPVCVECKLNEYECVLVKKGLPCLGPITYGGCNAACIRSGLGCIGCRGPLPGEVNPASEYEILKDLGYDDDYILRKFKT
FARWEP

Sequences:

>Translated_246_residues
MMDKLKLAVFELTDCGGCALNILFLYEKLFDLLEFYEITEFHMATSLSEGSHYDVALVTGTVSSQRDLALLKEARNHSDY
LIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALDSKPVVEYVAVDFALPGCPYDKNEVYQVLMDIAKGIEPVKK
DYPVCVECKLNEYECVLVKKGLPCLGPITYGGCNAACIRSGLGCIGCRGPLPGEVNPASEYEILKDLGYDDDYILRKFKT
FARWEP
>Mature_246_residues
MMDKLKLAVFELTDCGGCALNILFLYEKLFDLLEFYEITEFHMATSLSEGSHYDVALVTGTVSSQRDLALLKEARNHSDY
LIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALDSKPVVEYVAVDFALPGCPYDKNEVYQVLMDIAKGIEPVKK
DYPVCVECKLNEYECVLVKKGLPCLGPITYGGCNAACIRSGLGCIGCRGPLPGEVNPASEYEILKDLGYDDDYILRKFKT
FARWEP

Specific function: Unknown

COG id: COG1941

COG function: function code C; Coenzyme F420-reducing hydrogenase, gamma subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006137 [H]

Pfam domain/function: PF01058 Oxidored_q6 [H]

EC number: NA

Molecular weight: Translated: 27237; Mature: 27237

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDKLKLAVFELTDCGGCALNILFLYEKLFDLLEFYEITEFHMATSLSEGSHYDVALVTG
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
TVSSQRDLALLKEARNHSDYLIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALD
CCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHCCHHHHHHHHHHHCCCCCCCCCCC
SKPVVEYVAVDFALPGCPYDKNEVYQVLMDIAKGIEPVKKDYPVCVECKLNEYECVLVKK
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCEEEEEEEC
GLPCLGPITYGGCNAACIRSGLGCIGCRGPLPGEVNPASEYEILKDLGYDDDYILRKFKT
CCCCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
FARWEP
HHCCCC
>Mature Secondary Structure
MMDKLKLAVFELTDCGGCALNILFLYEKLFDLLEFYEITEFHMATSLSEGSHYDVALVTG
CCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEE
TVSSQRDLALLKEARNHSDYLIALGTCATHGSVQASVEGSIREKLKRVYGDEGNPMRALD
CCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCEEEHCCHHHHHHHHHHHCCCCCCCCCCC
SKPVVEYVAVDFALPGCPYDKNEVYQVLMDIAKGIEPVKKDYPVCVECKLNEYECVLVKK
CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCEEEEEECCCEEEEEEEC
GLPCLGPITYGGCNAACIRSGLGCIGCRGPLPGEVNPASEYEILKDLGYDDDYILRKFKT
CCCCCCCCCCCCCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHH
FARWEP
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1603063 [H]