| Definition | Thermococcus onnurineus NA1, complete genome. |
|---|---|
| Accession | NC_011529 |
| Length | 1,847,607 |
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The map label for this gene is 212223147
Identifier: 212223147
GI number: 212223147
Start: 4815
End: 5831
Strand: Reverse
Name: 212223147
Synonym: TON_0003
Alternate gene names: NA
Gene position: 5831-4815 (Counterclockwise)
Preceding gene: 212223148
Following gene: 212223146
Centisome position: 0.32
GC content: 48.18
Gene sequence:
>1017_bases ATGAGGATCATCACTGGAAAGAGATTTGAGGCCTTTGCAGATAATAACACACTGATTTTTCCCGAATGCGGAAAAAATCG GAGAGAGTTAGTTAGGATTGTTAGATCGCTCACCGGGGAGGAAACGGTGATAACAGCGAGCCTCGAGCTCATAGACCTCA TACTTGGTAAGTTCAGAGGCGAGGGACATTTCCTTATCTACTCCGACACTGGAAGGACCCTAACAACCAAGGAGGCCTAT GAGCTGAGAAAATACCTTGACTTCGATCTCCGGGGTGGCTTTACTGGTGAACCCTCCCGGGCGAGCGTCCTTTTCGTCGA GGGTAAGACTGATGCTAAGTTCTTTAAGGCGGTCTTCAAGAAGCTCTTCAAGTTCAAAGAGAGCAGAGAAGTTCCAGCGA ATCTAAAATTCATTGAGGGAGTCTTTGAGCGCGAGAATTTCGAGCTGCTGAGAAATGAGAATGGCTTCTTAGCGGTAATC CCAAGTGAGGGCAATTCAGGAGTCATCCGAAACCTAGGCAACTTTATCAGAGCAATGGAAGTCTTTGAATTAAGTGTTGA CAAAATAGGAGTCGCCATAGATGTCGATGACGACAGAGAGAGTGCGATGGCCTCAATAACCGGGAAGCTCTCCCGGTTCC GTCCTGAAAAAACGGCCACAGGTTTTAGAGTTGGGAAGACAGAGGTAATACCTCTAATCATAGGCCTTCCCTTTGAGGAC AAGCTAATCGAGTGGAAGAAGCCTACTGTTGAAGATTTAATGCTCCACCTCATAGAGCGAGAGGGACTTCTGGAGAGAAT CAGACCGGCATTAAGGACCCTAAACGAGAGCCTGTGCAGGAAGCTAAAGCCCAAAGAGGTCATGTACCTGGCTCTTTCGG CCTACGGACACTGGGGCAATCTGGAAGGCTTTTACGAGCTTTTTGTCATGCGCTCCCGCTTCAGAAACCTCAAGGCCATT CTTAGGGAAGCGGGGCTTATGGAAGGGCTTTTCATTATCTCAGGCATGAACCGTTGA
Upstream 100 bases:
>100_bases CGGGATAGCCGACTTTACGACGGAGCAGTACCTCAACGCGACCATACTTATAAGCACATTTGCCGTCATCGGAGCGATAA CTGTTGACATGGTGAAGTGA
Downstream 100 bases:
>100_bases ATTTTTATTCCACCTCCCCCAACTCTCCTAGGTGATACGCATGAAGCTCGCCTCATTCGATGTCTGGAACACCCTTCTAG ACATTAACATTATGCTCGAC
Product: protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRIITGKRFEAFADNNTLIFPECGKNRRELVRIVRSLTGEETVITASLELIDLILGKFRGEGHFLIYSDTGRTLTTKEAY ELRKYLDFDLRGGFTGEPSRASVLFVEGKTDAKFFKAVFKKLFKFKESREVPANLKFIEGVFERENFELLRNENGFLAVI PSEGNSGVIRNLGNFIRAMEVFELSVDKIGVAIDVDDDRESAMASITGKLSRFRPEKTATGFRVGKTEVIPLIIGLPFED KLIEWKKPTVEDLMLHLIEREGLLERIRPALRTLNESLCRKLKPKEVMYLALSAYGHWGNLEGFYELFVMRSRFRNLKAI LREAGLMEGLFIISGMNR
Sequences:
>Translated_338_residues MRIITGKRFEAFADNNTLIFPECGKNRRELVRIVRSLTGEETVITASLELIDLILGKFRGEGHFLIYSDTGRTLTTKEAY ELRKYLDFDLRGGFTGEPSRASVLFVEGKTDAKFFKAVFKKLFKFKESREVPANLKFIEGVFERENFELLRNENGFLAVI PSEGNSGVIRNLGNFIRAMEVFELSVDKIGVAIDVDDDRESAMASITGKLSRFRPEKTATGFRVGKTEVIPLIIGLPFED KLIEWKKPTVEDLMLHLIEREGLLERIRPALRTLNESLCRKLKPKEVMYLALSAYGHWGNLEGFYELFVMRSRFRNLKAI LREAGLMEGLFIISGMNR >Mature_338_residues MRIITGKRFEAFADNNTLIFPECGKNRRELVRIVRSLTGEETVITASLELIDLILGKFRGEGHFLIYSDTGRTLTTKEAY ELRKYLDFDLRGGFTGEPSRASVLFVEGKTDAKFFKAVFKKLFKFKESREVPANLKFIEGVFERENFELLRNENGFLAVI PSEGNSGVIRNLGNFIRAMEVFELSVDKIGVAIDVDDDRESAMASITGKLSRFRPEKTATGFRVGKTEVIPLIIGLPFED KLIEWKKPTVEDLMLHLIEREGLLERIRPALRTLNESLCRKLKPKEVMYLALSAYGHWGNLEGFYELFVMRSRFRNLKAI LREAGLMEGLFIISGMNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38638; Mature: 38638
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIITGKRFEAFADNNTLIFPECGKNRRELVRIVRSLTGEETVITASLELIDLILGKFRG CCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC EGHFLIYSDTGRTLTTKEAYELRKYLDFDLRGGFTGEPSRASVLFVEGKTDAKFFKAVFK CCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH KLFKFKESREVPANLKFIEGVFERENFELLRNENGFLAVIPSEGNSGVIRNLGNFIRAME HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH VFELSVDKIGVAIDVDDDRESAMASITGKLSRFRPEKTATGFRVGKTEVIPLIIGLPFED HHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCH KLIEWKKPTVEDLMLHLIEREGLLERIRPALRTLNESLCRKLKPKEVMYLALSAYGHWGN HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCC LEGFYELFVMRSRFRNLKAILREAGLMEGLFIISGMNR HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCC >Mature Secondary Structure MRIITGKRFEAFADNNTLIFPECGKNRRELVRIVRSLTGEETVITASLELIDLILGKFRG CCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCC EGHFLIYSDTGRTLTTKEAYELRKYLDFDLRGGFTGEPSRASVLFVEGKTDAKFFKAVFK CCCEEEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH KLFKFKESREVPANLKFIEGVFERENFELLRNENGFLAVIPSEGNSGVIRNLGNFIRAME HHHHHHHCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHH VFELSVDKIGVAIDVDDDRESAMASITGKLSRFRPEKTATGFRVGKTEVIPLIIGLPFED HHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCH KLIEWKKPTVEDLMLHLIEREGLLERIRPALRTLNESLCRKLKPKEVMYLALSAYGHWGN HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCC LEGFYELFVMRSRFRNLKAILREAGLMEGLFIISGMNR HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA