| Definition | Escherichia coli SE11 chromosome, complete genome. |
|---|---|
| Accession | NC_011415 |
| Length | 4,887,515 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 209918687
GI number:
Start: 1567955
End: 1571800
Strand: Direct
Name: Not Available
Synonym: ECSE_1496
Alternate gene names: NA
Gene position: NA
Preceding gene: 209918685
Following gene: 209918688
Centisome position: NA
GC content: NA
Gene sequence:
>3846_bases ATGCTGCGCGACAGACTGCGTTTTTCTCGGCGTCTGCACGGTGTTAAGAAGGTTAAAAATCCTGATGCACAACAGGCCAT TTTCCAGGAGATGGCGAAAGAGATTGACCAGGCGGCAGGGAAAGTCCTGCTGCGTGAAGCGGCACGACCGGAAATTACTT ATCCTGACAATTTACCGGTTAGTCAGAAAAAGCAGGACATTCTCGAAGCAATTCGTGATCACCAGGTAGTGATCGTCGCC GGGGAAACGGGTTCTGGTAAAACGACTCAGCTGCCGAAAATCTGTATGGAGCTGGGGCGCGGGATTAAAGGACTGATCGG CCATACCCAGCCGCGTCGCCTGGCGGCAAGAACGGTGGCGAACCGTATTGCAGAAGAGCTGAAAACGGAGCCGGGCGGTT GCATCGGTTACAAAGTGCGTTTCAGCGATCACGTAAGTGATAACACGATGGTCAAGCTGATGACCGACGGTATCCTGCTG GCGGAGATCCAGCAAGACCGCCTGCTGATGCAGTACGACACCATCATTATTGACGAAGCGCACGAACGCAGCCTGAATAT CGATTTTCTGCTCGGCTATTTGAAAGAGTTGCTGCCGCGGCGTCCTGACCTAAAAATCATTATCACTTCCGCGACTATCG ACCCGGAACGCTTTTCGCGCCACTTTAATAATGCGCCGATTATTGAAGTCTCCGGTAGGACCTATCCGGTGGAAGTGCGC TATCGCCCGATTGTTGAAGAAGCCGATGACACCGAGCGCGATCAGTTGCAGGCGATTTTTGACGCCGTAGACGAACTAAG CCAGGAAAGCCCCGGCGACATTCTGATCTTTATGAGCGGCGAGCGGGAAATTCGCGATACCGCCGATGCGCTGAACAAGC TGAACTTACGCCATACCGAAATCTTGCCGCTTTATGCGCGGCTTTCGAACAGCGAACAGAACCGCGTGTTCCAGTCGCAC AGCGGACGGCGCATTGTGCTGGCGACCAACGTCGCGGAAACCTCGCTGACCGTACCGGGGATTAAATACGTCATCGACCC CGGTACAGCGCGTATCAGCCGCTACAGCTATCGCACCAAAGTGCAGCGTTTGCCGATTGAACCCATTTCGCAGGCGTCTG CCAATCAGCGTAAAGGCCGCTGTGGTCGTGTGTCCGAAGGGATCTGTATTCGTCTCTATTCCGAAGACGATTTCCTCTCG CGCCCGGAGTTTACCGATCCGGAGATTCTGCGTACCAACCTGGCCTCGGTTATTTTGCAGATGACCGCGCTGGGGCTGGG CGATATCGCTGCGTTCCCGTTTGTCGAAGCACCGGATAAACGCAATATCCAGGATGGCGTGCGTCTGCTCGAAGAACTGG GCGCGATCACCACGGATGAACAGGCCAGCGCCTATAAACTGACGGCGCTCGGTCGCCAGCTCTCTCAGTTGCCTGTCGAC CCACGTCTGGCGCGTATGGTGCTGGAAGCGCAAAAACATGGCTGCGTGCGTGAGGCGATGATTATCACGTCCGCGCTCTC CATTCAGGATCCGCGCGAGCGTCCGATGGATAAACAGCAGGCATCGGACGAAAAACATCGTCGCTTCCACGACAAAGAAT CCGATTTCCTCGCGTTTGTAAATCTGTGGAATTATCTTGGCGAGCAGCAAAAGGCGCTTTCTTCTAACGCCTTCCGTCGA CTGTGTCGTACCGATTATCTCAACTATCTGCGCGTGCGCGAATGGCAGGATATCTACACCCAGTTGCGCCAGGTGGTGAA AGAACTTGGCATTCCGGTCAACAGCGAACCGGCGGAATATCGCGAAATTCACATTGCGTTGCTGACGGGTTTGCTTTCCC ATATCGGCATGAAAGATGCCGATAAACAAGAATATACCGGCGCACGTAACGCGCGTTTCTCCATCTTCCCCGGTTCTGGT TTATTCAAAAAACCGCCGAAATGGGTAATGGTGGCGGAACTGGTAGAAACCAGCCGCCTGTGGGGGCGCATTGCTGCGCG TATCGACCCGGAATGGGTGGAGCCTGTCGCTCAGCATTTGATTAAACGCACCTACAGCGAACCGCACTGGGAACGGGCGC AGGGCGCGGTGATGGCAACGGAAAAAGTCACCGTTTACGGGTTGCCGATTGTTGCCGCGCGTAAGGTCAACTACAGCCAG ATCGATCCGGCGTTATGCCGTGAACTCTTTATTCGCCATGCGCTGGTGGAAGGTGACTGGCAGACGCGTCACGCATTCTT CCGTGAAAACCTGAAACTGCGGGCCGAAGTGGAAGAGCTGGAACACAAATCACGTCGCCGCGATATTCTGGTTGATGACG AAACGTTGTTTGAGTTCTACGACCAGCGCATCAGCCACGATGTGATCTCTGCGCGCCACTTCGATAGCTGGTGGAAAAAA GTCAGCCGCGAAACGCCTGATTTGCTCAACTTTGAAAAGAGCATGTTGATCAAAGAAGGGGCGGAAAAAATCAGCAAGCT GGATTACCCGAACTTCTGGCATCAGGGCAATCTCAAGCTGCGTTTGAGCTATCAGTTTGAGCCCGGCGCGGATGCTGACG GTGTGACTGTGCATATCCCGCTGCCGTTACTTAACCAGGTTGAGGAGAATGGGTTTGAATGGCAGATCCCCGGTCTGCGC CGCGAACTGGTGATTGCTCTGATTAAATCGTTGCCGAAACCGGTACGCCGTAATTTTGTACCCGCGCCAAACTACGCCGA AGCGTTTTTAGGCCGCGTCACACCGCTGGAGTTACCGTTGCTTGACAGCCTTGAGCGCGAGTTACGGCGGATGACCGGCG TTACCGTTGACCGCGAAGACTGGCACTGGGATCAGGTGCCCGATCACCTGAAAATCACCTTCCGCGTGGTGGATGACAAA AACAAGAAGCTAAAAGAAGGGCGCTCGCTACAAGATCTGAAAGATGCGCTGAAAGGCAAAGTGCAGGAAACGCTGTCTGC GGTGGCGGATGACGGTATCGAGCAGAGCGGCTTACATATCTGGAGTTTTGGTCAGCTGCCGGAAAGCTACGAACAGAAGC GTGGCAACTACAAAGTGAAGGCGTGGCCGGCGCTGGTGGATGAACGCGACAGCGTGGCGATCAAACTGTTTGATAATCCG CTGGAACAAAAGCAGGCAATGTGGAACGGTCTTCGCCGTCTACTGCTACTGAATATTCCCTCGCCAATCAAGTATTTACA TGAAAAGTTACCGAACAAAGCCAAGCTGGGTCTGTACTTTAACCCGTATGGCAAAGTGCTGGAGCTGATCGACGACTGTA TCTCCTGCGGTGTGGATCAACTGATCGACGCCAATGGTGGCCCGGTCTGGACGGAAGAAGGCTTTGCTGCGCTGCATGAA AAAGTCCGCGCTGAACTGAACGACACGGTGGTGGATATTGCGAAGCAGGTCGAGCAAATCCTCACTGCGGTGTTCAATAT TAACAAACGTCTGAAAGGGCGGGTGGATATGACCATGGCGCTGGGGCTTTCTGACATTAAAGCGCAGATGGGCGGGTTGG TATATCGCGGTTTTGTCACTGGTAACGGCTTCAAACGGCTGGGCGACACGCTGCGTTATTTGCAGGCGATTGAAAAAAGG CTGGAAAAACTGGCGGTTGATCCACATCGCGACCGTGCTCAGATGCTGAAAGTCGAAAACGTCCAGCAGGCGTGGCAGCA ATGGATCAACAAACTGCCGCCTGCACGTCGTGAGGATGAAGACGTGAAAGAGATCCGTTGGATGATAGAAGAGTTGCGCG TTAGTTACTTCGCTCAACAACTTGGTACGCCTTATCCGATTTCAGATAAGCGTATTTTGCAGGCGATGGAGCAGATTAGC GGTTAA
Upstream 100 bases:
>100_bases TTTAAAAGAAAATTAATCAGGCAGACTACTGCCCACTAACGTTATGACAGAACAACAAAAATTGACCTTTACGGCCTTGC AGCAGCGGCTGGATTCGCTG
Downstream 100 bases:
>100_bases CCCTGCTATTTGCCTGATAAAGAAAAAACCCGGTAAGCATTTAGCGCCGGGTTTTTTATTAATTCTAAAACGGTAAGGGT AAAAATTCAGGAATTCAGAA
Product: ATP-dependent RNA helicase HrpA
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1281_residues MLRDRLRFSRRLHGVKKVKNPDAQQAIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVA GETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILL AEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSRHFNNAPIIEVSGRTYPVEVR YRPIVEEADDTERDQLQAIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVFQSH SGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDFLS RPEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTALGRQLSQLPVD PRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRR LCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHIALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSG LFKKPPKWVMVAELVETSRLWGRIAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQ IDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKK VSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEENGFEWQIPGLR RELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKITFRVVDDK NKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYEQKRGNYKVKAWPALVDERDSVAIKLFDNP LEQKQAMWNGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHE KVRAELNDTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFKRLGDTLRYLQAIEKR LEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQIS G
Sequences:
NA
Specific function: NA
COG id: COG1643
COG function: function code L; HrpA-like helicases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA