Definition Oligotropha carboxidovorans OM5, complete genome.
Accession NC_011386
Length 3,745,629

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 209883306

GI number:

Start: 153562

End: 155169

Strand: Reverse

Name: Not Available

Synonym: OCAR_4148

Alternate gene names: NA

Gene position: NA

Preceding gene: 209883307

Following gene: 209883303

Centisome position: NA

GC content: NA

Gene sequence:

>1608_bases
ATGGCAAAGTACTATGGACTCGGTGATGATGAGCCACGTGAGGATTCTGAACGAATCGTGGCGGCGCGTCTCCGTCATCT
ACCGGATGGATATGTCGTTTTTCATCACGTTACTTGGCAGTCAAAACGTAAGGGGCGCGAAGGCGATGGAGAGGCGGATT
TTATCGTTCTCCATCCTGAAATTGGAATCATAGTATTCGAGGTGAAAGGAGGGGGTGTCCATCTCGTCGACGGGCGGTGG
TACTCAACTGATCGTCATAACGAGGTGCACTCGATAAAAAACCCCTACGACCAAGCTGTTGCATCCAAGCATGCCTTGCA
TAAATGGTTAGAGAAGGACGCCGCTCTCGCGCGTGTGCCGGTAGGCCATGCGGTTGTGTTCCCTCACATCGATGAAATGC
CGCATCTTGGTTTGTCGGCAGTACCGGAAATTACTTGGACTAAGTCGGACTTACTAACGCCATTAGAGAACATTAAGCGA
ATTGCTCAGCACTGGAAAATGAAGTGCAGCCTTTCGTCCGAAGAAATCACTCGGATTTGTTCTCTGTTGGCTCCGACTGT
CAGCGTCAGAAGAGCTCTTTTTAGGTCGTCGACTGTTGCCAGTGAAGCCCTTTTACATTTGACGGCAGATCAAATCGAAG
CATTTTCGGGTCTAAGGTCAAGTCGAGGTGGGCTGATCCTTGGCGGAGCAGGAACCGGGAAGACTGTGCTCGCTCTTGCT
AGAGCTCAGCAGCTTGCGGCAGATGGGTTTCGCACAATATTTGTCTGTTTCAACGAGTTGTTGGGTTCTTCGTTGTCGCA
GCAATTTGCTGAACACCCATCACTAGTGGCTGGAACGTATCATTCGCTTTGCTTTCGCCAGGCTCGGCGAGCCAAGCTGC
AGATTCCTAACCAGCTGACGAGCTCTTGGTGGTCCACCGATGCGCCGGAATTATTAGTGTCTGCTTGCGCTGAGAGTGGG
GTCGAGTTTGACGCTATCGTTGTCGACGAGGCGCAAGACTTTGAACCATCCTGGATAGAATCGTTACGGTGCTTGATGAG
TAATCGTAGTGATGCTCCCTTCTATGCGTTTGCAGATCCCAGGCAGGAACTGTATGGCCGAGAGTGGTTGAGTGAAGAAA
AATGGCCGTTTCAGTATGCGCTTAGCAAAAATCTTCGAAACACTGAGCCTATTGCGAAAAGAGTTCTAGCAATCTTCAAC
GAGCGAGATATTTCCCATAAAATTGGCGGACCTGCGCCTATGTGGCGTGATATTCGAGACGTCAAGCGTCCCGATATTGA
CGCGATGGCGGTAGTGGAGCGCCTTGTCGAGGATGGCTTCGGGCCCAGTAATTTGGCCGTGCTTTGCAGCTCACCAGCGC
TCGTTGAAAGATTAAGACAAGCAACTGTGGGTGCGTTCTCTTTTGGTAAATGGGGAAGCCGCGGCATTCCTGTCGAGACA
ATCGGTCGCTTCAAAGGGCTTGAAGCTGAAGCAGCAGTGGTTGTTTTAGAAGAACAGGGCGACGAAGATTTTCAAAAGAC
CTTAGCCTACGTCGGAATTAGCCGAGCTAGAAGCGTGTTGGTCGTAGTAGCAAACAGCCGCTTACGATCAGCTTTGAACT
GGGGCTAG

Upstream 100 bases:

>100_bases
GGGAGCGTATACGTCAGATTGAGGCTAAAGCGCTCAGAAAATTGAAACATCCTTCACGGTCGCGGGCCCTTCGGACATTC
TTAGAGAGCGACTCTCTTTA

Downstream 100 bases:

>100_bases
ATTCAGTTGGAACAAAGGTCAAAATATCCAGCGCGTCCCGCAAGCGATAGACGAGAGAGATGCATATTGAACATCCTGCA
AGAGGGCTCTCCAAGATGCA

Product: nuclease-related domain family

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>535_residues
MAKYYGLGDDEPREDSERIVAARLRHLPDGYVVFHHVTWQSKRKGREGDGEADFIVLHPEIGIIVFEVKGGGVHLVDGRW
YSTDRHNEVHSIKNPYDQAVASKHALHKWLEKDAALARVPVGHAVVFPHIDEMPHLGLSAVPEITWTKSDLLTPLENIKR
IAQHWKMKCSLSSEEITRICSLLAPTVSVRRALFRSSTVASEALLHLTADQIEAFSGLRSSRGGLILGGAGTGKTVLALA
RAQQLAADGFRTIFVCFNELLGSSLSQQFAEHPSLVAGTYHSLCFRQARRAKLQIPNQLTSSWWSTDAPELLVSACAESG
VEFDAIVVDEAQDFEPSWIESLRCLMSNRSDAPFYAFADPRQELYGREWLSEEKWPFQYALSKNLRNTEPIAKRVLAIFN
ERDISHKIGGPAPMWRDIRDVKRPDIDAMAVVERLVEDGFGPSNLAVLCSSPALVERLRQATVGAFSFGKWGSRGIPVET
IGRFKGLEAEAAVVVLEEQGDEDFQKTLAYVGISRARSVLVVVANSRLRSALNWG

Sequences:
NA

Specific function: NA

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA