| Definition | Ureaplasma urealyticum serovar 10 str. ATCC 33699 chromosome, complete genome. |
|---|---|
| Accession | NC_011374 |
| Length | 874,478 |
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The map label for this gene is 209554488
Identifier: 209554488
GI number: 209554488
Start: 43791
End: 44909
Strand: Reverse
Name: 209554488
Synonym: UUR10_0040
Alternate gene names: NA
Gene position: 44909-43791 (Counterclockwise)
Preceding gene: 209554144
Following gene: 209554184
Centisome position: 5.14
GC content: 20.73
Gene sequence:
>1119_bases ATGTCAATTAATAAACATAAGATGCTAGATATATCTGAAATTATTTCTGGGCGAGGACCTAAAAATGTTAAAAACTTACA AGACTTTGCATCTCAACATGGAAAAATAAATTGACTACTAGTTAAAAATTTAATTAATAATTCTATTAATAATGATTTTG AAAAATATAATTTAGATGAAGAAAAACACTCTTTAGTAAAGTTAAATAAAAATGAATTAGTATATTCAATGTATGCAACT CCTGGAATTGTTGCAATTAATGAGTTTTATGATAATTTATACATAAATCAATCATTTTGTAAAATTATTCCAAATGAAAA TATTTGTTTAAAAAAATTTTTATTTTATTGACTTATAAAAAATAAAAATTATGCATTATCACTTTCATCTGGTACTACTC AATCAAATTTGAATATTAATAAGATAAGAAATTTTGTTATTTATTTACCACCAATAGAAGAACAAAATGCAATAATTTCG ATTATTGAACCATTAGAAAAAAGTATAAAAACTATAAATTTATTACAAACTAAAATTGGACTTTTTATTGAAAAAACATT TAATTTTATAAATAATAATTTAGCAAATGCTGACCTAATCGAATTTTCATTAAAGGATTTATTAAACATAAAAAGAGGGT TGCCTATAACAGAAAAAGATTTATTAAATAATCCCGGAAATTACCCACTTATTTCAGCTAGTTCTAAAAATAATGGTATT TTTGGTTATTTTAATGATTACATGTATGATGGAAAAAATATAACCATCTCTATGAACGGCAATGCAGGATGTATTTTTTA TCAAATTGGAAAATTTTCAGCTAATTCAGATGTACTTGTATTAAGCAATTCAAATAAAAATTTAACTAATATAGATTATA TTTATTACTTATTAAAAACTAAAGAAAAAGAAATTCAAAATTTAGCTATTGGAACAACTAGATTTAGATTAGGGAATAGT GTAATTGAAAAATTTAAAGTATTATTACCAAATATGGAAATTCAAAAAGAATTTTCTAAAATTGTTGAACCATTATTAAA TTTGTCTACAAAAGTAAATAAAATTGAAAAAAATTTAAATGAGTGTTTACTAAAAATTGTTAAAAAATTAATCATTTAA
Upstream 100 bases:
>100_bases CAAAATGTTAAATAATATAGGTCTAATAATATAAGTTCAAATATATTATGGTTTTAATTTGTTAGAATTTATTTAGTTAA CTAAATATAGAGGTTTAATA
Downstream 100 bases:
>100_bases TTTTTATCGCCATTTTGACCCCCATTTTGACCCCCATTTTGACCCCCATTTTGACCCCCATTTTTAATTTTAGTAATAGT TAATTTTATTTAGCTATTAC
Product: restriction-modification enzyme subunit s3a
Products: NA
Alternate protein names: S.MjaXIP; Type I restriction enzyme MjaXIP specificity protein; S protein [H]
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSINKHKMLDISEIISGRGPKNVKNLQDFASQHGKINWLLVKNLINNSINNDFEKYNLDEEKHSLVKLNKNELVYSMYAT PGIVAINEFYDNLYINQSFCKIIPNENICLKKFLFYWLIKNKNYALSLSSGTTQSNLNINKIRNFVIYLPPIEEQNAIIS IIEPLEKSIKTINLLQTKIGLFIEKTFNFINNNLANADLIEFSLKDLLNIKRGLPITEKDLLNNPGNYPLISASSKNNGI FGYFNDYMYDGKNITISMNGNAGCIFYQIGKFSANSDVLVLSNSNKNLTNIDYIYYLLKTKEKEIQNLAIGTTRFRLGNS VIEKFKVLLPNMEIQKEFSKIVEPLLNLSTKVNKIEKNLNECLLKIVKKLII
Sequences:
>Translated_372_residues MSINKHKMLDISEIISGRGPKNVKNLQDFASQHGKIN*LLVKNLINNSINNDFEKYNLDEEKHSLVKLNKNELVYSMYAT PGIVAINEFYDNLYINQSFCKIIPNENICLKKFLFY*LIKNKNYALSLSSGTTQSNLNINKIRNFVIYLPPIEEQNAIIS IIEPLEKSIKTINLLQTKIGLFIEKTFNFINNNLANADLIEFSLKDLLNIKRGLPITEKDLLNNPGNYPLISASSKNNGI FGYFNDYMYDGKNITISMNGNAGCIFYQIGKFSANSDVLVLSNSNKNLTNIDYIYYLLKTKEKEIQNLAIGTTRFRLGNS VIEKFKVLLPNMEIQKEFSKIVEPLLNLSTKVNKIEKNLNECLLKIVKKLII >Mature_371_residues SINKHKMLDISEIISGRGPKNVKNLQDFASQHGKIN*LLVKNLINNSINNDFEKYNLDEEKHSLVKLNKNELVYSMYATP GIVAINEFYDNLYINQSFCKIIPNENICLKKFLFY*LIKNKNYALSLSSGTTQSNLNINKIRNFVIYLPPIEEQNAIISI IEPLEKSIKTINLLQTKIGLFIEKTFNFINNNLANADLIEFSLKDLLNIKRGLPITEKDLLNNPGNYPLISASSKNNGIF GYFNDYMYDGKNITISMNGNAGCIFYQIGKFSANSDVLVLSNSNKNLTNIDYIYYLLKTKEKEIQNLAIGTTRFRLGNSV IEKFKVLLPNMEIQKEFSKIVEPLLNLSTKVNKIEKNLNECLLKIVKKLII
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 42224; Mature: 42093
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSINKHKMLDISEIISGRGPKNVKNLQDFASQHGKINLLVKNLINNSINNDFEKYNLDEE CCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEHHHHHHCCCCCCCHHHCCCCHH KHSLVKLNKNELVYSMYATPGIVAINEFYDNLYINQSFCKIIPNENICLKKFLFYLIKNK HHHHEEECCCCEEEEEECCCCEEEHHHHHHHEEECCHHHHCCCCCCHHHHHHHHHHHCCC NYALSLSSGTTQSNLNINKIRNFVIYLPPIEEQNAIISIIEPLEKSIKTINLLQTKIGLF CEEEEECCCCCCCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IEKTFNFINNNLANADLIEFSLKDLLNIKRGLPITEKDLLNNPGNYPLISASSKNNGIFG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCCCCEEE YFNDYMYDGKNITISMNGNAGCIFYQIGKFSANSDVLVLSNSNKNLTNIDYIYYLLKTKE EECCEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHEEEEEHHCCH KEIQNLAIGTTRFRLGNSVIEKFKVLLPNMEIQKEFSKIVEPLLNLSTKVNKIEKNLNEC HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKIVKKLII HHHHHHHHCC >Mature Secondary Structure SINKHKMLDISEIISGRGPKNVKNLQDFASQHGKINLLVKNLINNSINNDFEKYNLDEE CCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCEEEEHHHHHHCCCCCCCHHHCCCCHH KHSLVKLNKNELVYSMYATPGIVAINEFYDNLYINQSFCKIIPNENICLKKFLFYLIKNK HHHHEEECCCCEEEEEECCCCEEEHHHHHHHEEECCHHHHCCCCCCHHHHHHHHHHHCCC NYALSLSSGTTQSNLNINKIRNFVIYLPPIEEQNAIISIIEPLEKSIKTINLLQTKIGLF CEEEEECCCCCCCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IEKTFNFINNNLANADLIEFSLKDLLNIKRGLPITEKDLLNNPGNYPLISASSKNNGIFG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCEEEECCCCCCEEE YFNDYMYDGKNITISMNGNAGCIFYQIGKFSANSDVLVLSNSNKNLTNIDYIYYLLKTKE EECCEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCHHHEEEEEHHCCH KEIQNLAIGTTRFRLGNSVIEKFKVLLPNMEIQKEFSKIVEPLLNLSTKVNKIEKNLNEC HHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKIVKKLII HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]