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The map label for this gene is 209554425

Identifier: 209554425

GI number: 209554425

Start: 218666

End: 219520

Strand: Reverse

Name: 209554425

Synonym: UUR10_0181

Alternate gene names: NA

Gene position: 219520-218666 (Counterclockwise)

Preceding gene: 209554397

Following gene: 209554168

Centisome position: 25.1

GC content: 26.78

Gene sequence:

>855_bases
ATGAAAACAGCAATTTTAATCGATACTGGCGCTAATGTTTTAGATATTAAAGATGATAATGTGTATTTTGTACCCATTCA
ATTAATTGTTAAAGAACATCAAGTTGAACAACAATTAAAAGATGTTATTGATGTTAGTCAAGAACAATTAAAACAAATAT
TAATTAATAAAACAAGTATTCATACTTCATTACCTTCACCAGGCTTTGTTATGAATAAATTAGACGAGTTATTTACAAAA
TACGATCGTGTTGTTATTTTAACGTTATCAAGTGGTTTATCAAGTTATTTTGAGTCTTTAAGTATTATTAAAGAAGATTA
TAAAGACAAGCATCTAGTATGTATTGACTCACGTTCTGTTTCCATTGGTATTTTATGATTAGTTGATGAAATCAATTCGC
TACTAAAAAATAATCCAAGTGATGAAGAATTAATAGCATTAGTTAAAGAACGTTCACAAAAAATTATTGGTGGTGTTATT
GTCAATAATTTAGATCAATTAATTGCGGGCGGGCGTGTTAAGAAAACTAAAGGAATCATAGCAAAAGCATTACGTTTAAA
ATTAATTGTTCGTTGAAATGGTCAATTAGATTTTATGGATAAAACACCAAATTTATCAATCGCTATCGATAAACTATTAG
ATATTATTAATGACCAAAATCAATGACGTACTAATGGTATTAAAAACATTGTTATTCTTACTGATTTAGAAAACGAATCA
CAAATCAATTCACTAAAAACATCATTACAAGAAAAAATCCAGCAAGATGTTGAAATTAAAGTTTCATATCTACCTGGATG
TATTTATGCCCATGTTGGTTTAAATAATTTTGCTATTTTAATTGAAGCTAACTAA

Upstream 100 bases:

>100_bases
TTATAATATTAAATTAAGCTTATCTAACTTTTAATCATAGTTAATAATGAAGTTTTTATTATAATTTTTAAATAAGTTTT
AGTTAACTAGAGGTAAATAC

Downstream 100 bases:

>100_bases
ATTTTTATTTTAAATAATTAATATGACACAAAAAAATCTGATGCTAATTAAAAAGTCATCAGATTTTTATATCCTATTGT
TTATTATGATTTAATTATTA

Product: EDD domain protein, DegV family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MKTAILIDTGANVLDIKDDNVYFVPIQLIVKEHQVEQQLKDVIDVSQEQLKQILINKTSIHTSLPSPGFVMNKLDELFTK
YDRVVILTLSSGLSSYFESLSIIKEDYKDKHLVCIDSRSVSIGILWLVDEINSLLKNNPSDEELIALVKERSQKIIGGVI
VNNLDQLIAGGRVKKTKGIIAKALRLKLIVRWNGQLDFMDKTPNLSIAIDKLLDIINDQNQWRTNGIKNIVILTDLENES
QINSLKTSLQEKIQQDVEIKVSYLPGCIYAHVGLNNFAILIEAN

Sequences:

>Translated_284_residues
MKTAILIDTGANVLDIKDDNVYFVPIQLIVKEHQVEQQLKDVIDVSQEQLKQILINKTSIHTSLPSPGFVMNKLDELFTK
YDRVVILTLSSGLSSYFESLSIIKEDYKDKHLVCIDSRSVSIGIL*LVDEINSLLKNNPSDEELIALVKERSQKIIGGVI
VNNLDQLIAGGRVKKTKGIIAKALRLKLIVR*NGQLDFMDKTPNLSIAIDKLLDIINDQNQ*RTNGIKNIVILTDLENES
QINSLKTSLQEKIQQDVEIKVSYLPGCIYAHVGLNNFAILIEAN
>Mature_284_residues
MKTAILIDTGANVLDIKDDNVYFVPIQLIVKEHQVEQQLKDVIDVSQEQLKQILINKTSIHTSLPSPGFVMNKLDELFTK
YDRVVILTLSSGLSSYFESLSIIKEDYKDKHLVCIDSRSVSIGIL*LVDEINSLLKNNPSDEELIALVKERSQKIIGGVI
VNNLDQLIAGGRVKKTKGIIAKALRLKLIVR*NGQLDFMDKTPNLSIAIDKLLDIINDQNQ*RTNGIKNIVILTDLENES
QINSLKTSLQEKIQQDVEIKVSYLPGCIYAHVGLNNFAILIEAN

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 31376; Mature: 31376

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAILIDTGANVLDIKDDNVYFVPIQLIVKEHQVEQQLKDVIDVSQEQLKQILINKTSI
CCEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHE
HTSLPSPGFVMNKLDELFTKYDRVVILTLSSGLSSYFESLSIIKEDYKDKHLVCIDSRSV
ECCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCE
SIGILLVDEINSLLKNNPSDEELIALVKERSQKIIGGVIVNNLDQLIAGGRVKKTKGIIA
EEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KALRLKLIVRNGQLDFMDKTPNLSIAIDKLLDIINDQNQRTNGIKNIVILTDLENESQIN
HHHHHEEEEECCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHH
SLKTSLQEKIQQDVEIKVSYLPGCIYAHVGLNNFAILIEAN
HHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MKTAILIDTGANVLDIKDDNVYFVPIQLIVKEHQVEQQLKDVIDVSQEQLKQILINKTSI
CCEEEEEECCCCEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHE
HTSLPSPGFVMNKLDELFTKYDRVVILTLSSGLSSYFESLSIIKEDYKDKHLVCIDSRSV
ECCCCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCE
SIGILLVDEINSLLKNNPSDEELIALVKERSQKIIGGVIVNNLDQLIAGGRVKKTKGIIA
EEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KALRLKLIVRNGQLDFMDKTPNLSIAIDKLLDIINDQNQRTNGIKNIVILTDLENESQIN
HHHHHEEEEECCCEEEECCCCCCEEEHHHHHHHHCCCCCCCCCCCEEEEEEECCCCHHHH
SLKTSLQEKIQQDVEIKVSYLPGCIYAHVGLNNFAILIEAN
HHHHHHHHHHHHCCEEEEEECCCEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11048724 [H]